Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,420,948 C→A L89I (CTC→ATC)  ydaT → Rac prophage; protein YdaT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,420,9480CA100.0% 513.7 / NA 143L89I (CTC→ATC) ydaTRac prophage; protein YdaT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (74/69);  total (74/69)

Only 100 of 145 total aligned reads displayed.

CAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAGCGGCGGCGGTTCTTCCGA  >  NC_000913/1420814‑1421084
                                                                                                                                      |                                                                                                                                        
 aGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCa                                                                                                                                    >  1:751093/1‑140 (MQ=255)
 aGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCa                                                                                                                                    >  1:627312/1‑140 (MQ=255)
 aGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCa                                                                                                                                    <  1:2713391/140‑1 (MQ=255)
 aGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCa                                                                                                                                    >  1:2530426/1‑140 (MQ=255)
  ggCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCAt                                                                                                                                   <  2:975418/140‑1 (MQ=255)
       ggACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAatct                                                                                                                                       <  2:838938/131‑1 (MQ=255)
       ggACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAatct                                                                                                                                       >  1:838938/1‑131 (MQ=255)
       ggACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCg                                                                                                                              >  2:894274/1‑140 (MQ=255)
        gACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGa                                                                                                                             <  1:319671/140‑1 (MQ=255)
             gAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATAccc                                                                                                                        >  1:1071549/1‑140 (MQ=255)
                   tCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAAc                                                                                                                  >  1:119991/1‑140 (MQ=255)
                    cagcagAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACg                                                                                                                 <  2:1073810/140‑1 (MQ=255)
                     agcagAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGc                                                                                                                <  2:2692253/140‑1 (MQ=255)
                      gcagAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGcc                                                                                                               <  1:836452/140‑1 (MQ=255)
                        agAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGAT‑CCCTGGAACGCCGTg                                                                                                            >  1:2236284/1‑140 (MQ=255)
                         gAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTg                                                                                                            >  2:2353383/1‑140 (MQ=255)
                          aaTATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGc                                                                                                           >  2:12220/1‑140 (MQ=255)
                          aaTATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGc                                                                                                           >  2:2630448/1‑140 (MQ=255)
                           atatCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGcc                                                                                                               >  2:390032/1‑135 (MQ=255)
                           atatCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGcc                                                                                                               <  1:390032/135‑1 (MQ=255)
                           atatCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCa                                                                                                          >  2:1777351/1‑140 (MQ=255)
                           atatCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCa                                                                                                          >  1:2590967/1‑140 (MQ=255)
                                tatcACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACt                                                                                                     >  1:980469/1‑140 (MQ=255)
                                  tcACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTgg                                                                                                   <  2:1354823/140‑1 (MQ=255)
                                    aCCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTggcg                                                                                                 >  2:409335/1‑140 (MQ=255)
                                    aCCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTggcg                                                                                                 >  2:2538479/1‑140 (MQ=255)
                                    aCCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTggc                                                                                                  <  2:2528489/139‑1 (MQ=255)
                                    aCCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTggc                                                                                                  >  1:2528489/1‑139 (MQ=255)
                                       gttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGgcggcg                                                                                              >  2:632204/1‑140 (MQ=255)
                                       gttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGAT‑CCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             <  2:2236284/140‑1 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTggcgg                                                                                                <  2:1323799/137‑1 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTggcgg                                                                                                >  1:1323799/1‑137 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTgg                                                                                                   <  1:557588/134‑1 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             <  1:2353383/140‑1 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             >  2:2220652/1‑140 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             >  1:1786931/1‑140 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             >  2:74517/1‑140 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             >  2:1297331/1‑140 (MQ=255)
                                        ttggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTATGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGgcgc                                                                                             >  1:2143902/1‑140 (MQ=255)
                                          ggttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAg                                                                                           >  2:504957/1‑140 (MQ=255)
                                           gttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAgg                                                                                          <  1:1297331/140‑1 (MQ=255)
                                           gttgAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAgg                                                                                          <  1:376151/140‑1 (MQ=255)
                                                aaGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCg                                                                                     <  2:543836/140‑1 (MQ=255)
                                                aaGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCg                                                                                     >  1:643499/1‑140 (MQ=255)
                                                  ggTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGtt                                                                                   <  1:4122/140‑1 (MQ=255)
                                                  ggTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGtt                                                                                   <  2:1071549/140‑1 (MQ=255)
                                                  ggTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGtt                                                                                   <  1:2538479/140‑1 (MQ=255)
                                                     gAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAg                                                                                >  2:2096598/1‑140 (MQ=255)
                                                     gAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAg                                                                                <  2:2524940/140‑1 (MQ=255)
                                                     gAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAg                                                                                >  1:1029775/1‑140 (MQ=255)
                                                     gAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAg                                                                                <  1:1938820/140‑1 (MQ=255)
                                                     gAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAg                                                                                <  1:2096598/140‑1 (MQ=255)
                                                      aaaCGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGt                                                                               <  1:894274/140‑1 (MQ=255)
                                                        aCGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTAc                                                                             <  1:323676/140‑1 (MQ=255)
                                                        aCGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTAc                                                                             >  2:584261/1‑140 (MQ=255)
                                                          gAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACgg                                                                           <  1:2249814/140‑1 (MQ=255)
                                                           aaaaCGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGc                                                                          <  1:2268354/140‑1 (MQ=255)
                                                              aCGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTAc                                                                             >  2:9319/1‑134 (MQ=255)
                                                              aCGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTAc                                                                             <  1:9319/134‑1 (MQ=255)
                                                              aCGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAAt                                                                       >  2:620630/1‑140 (MQ=255)
                                                                     gagaAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATgcg                                                                <  1:504957/140‑1 (MQ=255)
                                                                     gagaAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATgcg                                                                <  2:767788/140‑1 (MQ=255)
                                                                     gagaAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATgcg                                                                <  1:88929/140‑1 (MQ=255)
                                                                      agaAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATgcgc                                                               >  2:43335/1‑140 (MQ=255)
                                                                          aaaaTTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATgcg                                                                <  1:454536/135‑1 (MQ=255)
                                                                          aaaaTTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATgcg                                                                >  2:454536/1‑135 (MQ=255)
                                                                          aaaaTTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCCGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatga                                                           <  2:1226230/140‑1 (MQ=255)
                                                                               tCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatgatgatg                                                      <  1:1558861/140‑1 (MQ=255)
                                                                                cAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatgatgatg                                                      >  1:1328563/1‑139 (MQ=255)
                                                                                cAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatgatgatg                                                      <  2:1328563/139‑1 (MQ=255)
                                                                                cAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatg                                                            <  2:1785676/133‑1 (MQ=255)
                                                                                cAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatg                                                            >  1:1785676/1‑133 (MQ=255)
                                                                                cAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGc                                                     >  1:1564464/1‑140 (MQ=255)
                                                                                cAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGc                                                     >  2:2712225/1‑140 (MQ=255)
                                                                                        gATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCatgatgatg                                                      <  1:2419143/131‑1 (MQ=255)
                                                                                        gATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAg                                             <  1:584261/140‑1 (MQ=255)
                                                                                        gATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAg                                             <  2:1564464/140‑1 (MQ=255)
                                                                                          tCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGcc                                           <  2:1499781/140‑1 (MQ=255)
                                                                                             cAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAATTACGGCAATTGATGCGCATGATGATGCAGTCCTAGCCGtt                                        >  2:153029/1‑140 (MQ=255)
                                                                                             cAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGtt                                        >  2:327179/1‑140 (MQ=255)
                                                                                                cAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTAc                                     >  1:97801/1‑140 (MQ=255)
                                                                                                   ttCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCgg                                  >  2:2062083/1‑140 (MQ=255)
                                                                                                    tCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGa                                 <  2:590330/140‑1 (MQ=255)
                                                                                                     cTGGTAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGaa                                >  2:188087/1‑140 (MQ=255)
                                                                                                      tGGCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGaaa                               >  2:1667510/1‑140 (MQ=255)
                                                                                                       ggCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAATTACGGCAATTGATGCGCATGATGATGCAGTCCTAGCCGTTTACCGGAAAg                              <  1:153029/140‑1 (MQ=255)
                                                                                                       ggCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAg                              >  1:1731509/1‑140 (MQ=255)
                                                                                                       ggCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAg                              >  2:1939068/1‑140 (MQ=255)
                                                                                                        gCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCa                                               >  1:1269471/1‑122 (MQ=255)
                                                                                                        gCAATCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCa                                               <  2:1269471/122‑1 (MQ=255)
                                                                                                           aTCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCa                          >  1:488507/1‑140 (MQ=255)
                                                                                                            tCCTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCAt                         <  1:12220/140‑1 (MQ=255)
                                                                                                             ccTTCCGCGCGAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCAtt                        >  1:736774/1‑140 (MQ=255)
                                                                                                                  cgcgcgAGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAgc                   >  1:1775317/1‑140 (MQ=255)
                                                                                                                        aGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAgcggcgg              >  1:2008649/1‑139 (MQ=255)
                                                                                                                        aGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAgcggcgg              <  2:2008649/139‑1 (MQ=255)
                                                                                                                        aGCTGCGTCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAgc                   >  2:2324519/1‑134 (MQ=255)
                                                                                                                               tCACCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAGCGGCGGCGGttctt      >  2:873325/1‑140 (MQ=255)
                                                                                                                                 aCCGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAGCGGCGGCGGTTCTTcc    <  1:113119/140‑1 (MQ=255)
                                                                                                                                   cGAATCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAGCGGCGGCGGTTCTTCcga  <  1:620630/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                        
CAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAGCGGCGGCGGTTCTTCCGA  >  NC_000913/1420814‑1421084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑