BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	459,528	G→T	R214L (CGC→CTC)	lon →	Lon protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	459,528	0	G	T	100.0%	364.8 / NA	101	R214L (CGC→CTC)	lon	Lon protease
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (54/47); total (54/47)

Only 100 of 102 total aligned reads displayed.

ATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATC  >  NC_000913/459392‑459661

aTTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCaa                                                                                                                                    <  1:16272/140‑1 (MQ=255)

  tgctgcACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAAcc                                                                                                                                  >  1:776956/1‑140 (MQ=255)

   gctgcACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACcg                                                                                                                                 <  2:1142445/140‑1 (MQ=255)

    ctgcACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACcgc                                                                                                                                >  1:678307/1‑140 (MQ=255)

     tgcACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACcgcg                                                                                                                               >  2:277750/1‑140 (MQ=255)

       cacaTATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGtt                                                                                                                             >  2:286822/1‑140 (MQ=255)

         caTATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAGATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTaa                                                                                                                           >  1:1347378/1‑140 (MQ=255)

            atGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTaaaaa                                                                                                                        >  2:125659/1‑140 (MQ=255)

            atGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTaaaaa                                                                                                                        >  1:987190/1‑140 (MQ=255)

             tGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAg                                                                                                                       <  2:1281340/140‑1 (MQ=255)

              gCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACcg                                                                                                                                 <  2:831801/129‑1 (MQ=255)

              gCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACcg                                                                                                                                 >  1:831801/1‑129 (MQ=255)

              gCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGc                                                                                                                      >  1:577744/1‑140 (MQ=255)

              gCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGc                                                                                                                      >  1:1335296/1‑140 (MQ=255)

              gCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGc                                                                                                                      >  1:877928/1‑140 (MQ=255)

                cGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAg                                                                                                                    <  1:125659/140‑1 (MQ=255)

                cGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAg                                                                                                                    <  2:589725/140‑1 (MQ=255)

                 gCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGa                                                                                                                   <  1:1295350/140‑1 (MQ=255)

                  cTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGAt                                                                                                                  >  1:449164/1‑140 (MQ=255)

                    gAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATgg                                                                                                                >  2:866272/1‑140 (MQ=255)

                    gAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATgg                                                                                                                >  1:1227407/1‑140 (MQ=255)

                    gAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATgg                                                                                                                >  2:1159957/1‑140 (MQ=255)

                       aCTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGgaga                                                                                                             >  1:159552/1‑140 (MQ=255)

                            cTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATcc                                                                                                        <  2:1335296/140‑1 (MQ=255)

                             tGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATccc                                                                                                       <  1:248114/140‑1 (MQ=255)

                             tGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATccc                                                                                                       <  1:759890/140‑1 (MQ=255)

                             tGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATccc                                                                                                       <  1:973949/140‑1 (MQ=255)

                             tGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATccc                                                                                                       <  1:233921/140‑1 (MQ=255)

                                 aaaCAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCg                                                                                                   <  1:1216155/140‑1 (MQ=255)

                                 aaaCAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCg                                                                                                   >  1:637845/1‑140 (MQ=255)

                                  aaCAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGt                                                                                                  <  2:1252744/140‑1 (MQ=255)

                                  aaCAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGt                                                                                                  <  2:1246756/140‑1 (MQ=255)

                                  aaCAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGt                                                                                                  <  2:678307/140‑1 (MQ=255)

                                   aCAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTg                                                                                                 >  2:695471/1‑140 (MQ=255)

                                     aGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  2:665576/140‑1 (MQ=255)

                                     aGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  2:637845/140‑1 (MQ=255)

                                     aGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  2:877928/140‑1 (MQ=255)

                                     aGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  1:1159957/140‑1 (MQ=255)

                                     aGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  1:847543/140‑1 (MQ=255)

                                      gTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGt                                                                                              >  1:1188367/1‑140 (MQ=255)

                                       tCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTa                                                                                             <  2:577744/140‑1 (MQ=255)

                                         tGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGt                                                                                                  <  1:931308/133‑1 (MQ=255)

                                         tGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGt                                                                                                  >  2:931308/1‑133 (MQ=255)

                                                 agaTGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               >  2:1109226/1‑128 (MQ=255)

                                                 agaTGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  1:1109226/128‑1 (MQ=255)

                                                 agaTGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAAc                                                                                   >  2:532632/1‑140 (MQ=255)

                                                 agaTGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAAc                                                                                   >  1:306193/1‑140 (MQ=255)

                                                    tGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAGATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAg                                                                                <  2:1347378/140‑1 (MQ=255)

                                                     gTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               <  2:378616/124‑1 (MQ=255)

                                                     gTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAg                                                                                               >  1:378616/1‑124 (MQ=255)

                                                     gTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGc                                                                               >  2:1283448/1‑140 (MQ=255)

                                                     gTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGc                                                                               >  2:1247238/1‑140 (MQ=255)

                                                     gTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAACCCCAGCGTGAGTACTATCTGAACGAGc                                                                               >  2:912215/1‑140 (MQ=255)

                                                     gTCCGACGTTAACGAACGGCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGATGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGacc                                                                               >  2:4009/1‑138 (MQ=255)

                                                         gACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAAt                                                                           <  1:1283448/140‑1 (MQ=255)

                                                         gACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAAt                                                                           <  2:1227407/140‑1 (MQ=255)

                                                          aCGTTAACGAACGTCTGGAATATCTGATGGCTATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATg                                                                          >  2:541882/1‑140 (MQ=255)

                                                          aCGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATg                                                                          >  1:274071/1‑140 (MQ=255)

                                                           cGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGa                                                                         <  1:326140/140‑1 (MQ=255)

                                                            gTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGaa                                                                        <  2:190179/140‑1 (MQ=255)

                                                              tAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAg                                                                      <  1:695471/140‑1 (MQ=255)

                                                               aacgaacgTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGTAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGc                                                                     >  1:1083135/1‑140 (MQ=255)

                                                               aacgaacgTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGc                                                                     <  2:160453/140‑1 (MQ=255)

                                                                   aacgTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTAtt                                                                 <  2:449164/140‑1 (MQ=255)

                                                                    acgTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTc                                                                <  2:1213409/140‑1 (MQ=255)

                                                                              tatCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACt                                                      <  2:159552/140‑1 (MQ=255)

                                                                                tCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCagaaag                                                          >  2:1238842/1‑134 (MQ=255)

                                                                                tCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCagaaag                                                          <  1:1238842/134‑1 (MQ=255)

                                                                                tCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCg                                                    <  2:1188367/140‑1 (MQ=255)

                                                                                tCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCg                                                    >  1:585674/1‑140 (MQ=255)

                                                                                tCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCg                                                    <  2:274071/140‑1 (MQ=255)

                                                                                     tGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGaa                                               >  1:363865/1‑140 (MQ=255)

                                                                                      ggCAATGATGGAATCGGAAAACGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCG‑GAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAAt                                             >  1:231388/1‑140 (MQ=255)

                                                                                         aaTGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATgg                                           >  1:463989/1‑140 (MQ=255)

                                                                                           tgatgGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGgac                                         >  1:1190765/1‑140 (MQ=255)

                                                                                            gatgGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGgacg                                        <  2:776956/140‑1 (MQ=255)

                                                                                                 aaTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGAcgcg                                   >  2:467667/1‑140 (MQ=255)

                                                                                                  aTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACgcgc                                  >  2:1149091/1‑140 (MQ=255)

                                                                                                  aTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACgcgc                                  >  2:730413/1‑140 (MQ=255)

                                                                                                  aTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACgcgc                                  >  2:1143103/1‑140 (MQ=255)

                                                                                                  aTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACgcgc                                  >  1:593978/1‑140 (MQ=255)

                                                                                                        aaTCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACg                            >  1:1283688/1‑140 (MQ=255)

                                                                                                          tCGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGaa                          >  1:220616/1‑140 (MQ=255)

                                                                                                           cGATCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCG‑GAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGaaaa                        <  2:231388/140‑1 (MQ=255)

                                                                                                             aTCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAAc                       >  1:461042/1‑140 (MQ=255)

                                                                                                              tCTGCTGTAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACg                      <  2:1083135/140‑1 (MQ=255)

                                                                                                              tCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACg                      <  2:593978/140‑1 (MQ=255)

                                                                                                              tCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACg                      <  2:1283688/140‑1 (MQ=255)

                                                                                                              tCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACg                      <  1:955952/140‑1 (MQ=255)

                                                                                                              tCTGCTGCAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACg                      <  1:1247238/140‑1 (MQ=255)

                                                                                                                    gcAGGTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGccc                >  2:682792/1‑140 (MQ=255)

                                                                                                                        gTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGaa            >  1:621996/1‑140 (MQ=255)

                                                                                                                        gTTGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGaa            >  1:294664/1‑140 (MQ=255)

                                                                                                                          tGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAg                   >  1:1274483/1‑131 (MQ=255)

                                                                                                                          tGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAg                   <  2:1274483/131‑1 (MQ=255)

                                                                                                                          tGAGAAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgc          >  1:898030/1‑140 (MQ=255)

                                                                                                                            agaAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc        >  2:621516/1‑140 (MQ=255)

                                                                                                                            agaAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc        >  2:699751/1‑140 (MQ=255)

                                                                                                                            agaAACGCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc        >  1:1251658/1‑140 (MQ=255)

                                                                                                                                  gCATTCTCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATc  >  1:350589/1‑140 (MQ=255)

ATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATC  >  NC_000913/459392‑459661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`