BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,167,472	G→T	R83S (CGC→AGC)	ygiS ←	putative deoxycholate binding periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,167,472	0	G	T	100.0%	396.4 / NA	111	R83S (CGC→AGC)	ygiS	putative deoxycholate binding periplasmic protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (41/70); total (41/70)

Only 100 of 111 total aligned reads displayed.

TGCCGTTTTCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCGTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGATTG  >  NC_000913/3167338‑3167605

tGCCGTTTTCGGGTCAACCGCGCGCTGCCAGCCGAGGTCAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAg                                                                                                                                  >  1:1040209/1‑140 (MQ=255)

tGCCGTTTTCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAg                                                                                                                                  >  2:2209252/1‑140 (MQ=255)

      tttCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAg                                                                                                                            <  1:173505/140‑1 (MQ=255)

      tttCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAg                                                                                                                            >  1:1471434/1‑140 (MQ=255)

      tttCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAg                                                                                                                            >  1:1320058/1‑140 (MQ=255)

       ttCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAg                                                                                                                            >  2:36077/1‑139 (MQ=255)

       ttCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAg                                                                                                                            <  1:36077/139‑1 (MQ=255)

           ggTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGc                                                                                                                       <  1:721621/140‑1 (MQ=255)

           ggTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGc                                                                                                                       <  2:487349/140‑1 (MQ=255)

           ggTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGc                                                                                                                       <  1:1375518/140‑1 (MQ=255)

           ggTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGc                                                                                                                       <  2:2234147/140‑1 (MQ=255)

            gTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGc                                                                                                                       >  2:541478/1‑139 (MQ=255)

            gTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGc                                                                                                                       <  1:541478/139‑1 (MQ=255)

             tCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTg                                                                                                                     >  2:2080768/1‑140 (MQ=255)

                aCCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCAc                                                                                                                  <  1:1371635/140‑1 (MQ=255)

                aCCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCAc                                                                                                                  <  1:2080768/140‑1 (MQ=255)

                aCCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCAc                                                                                                                  <  1:2001930/140‑1 (MQ=255)

                aCCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCAc                                                                                                                  <  1:1123844/140‑1 (MQ=255)

                aCCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCAc                                                                                                                  <  2:233405/140‑1 (MQ=255)

                aCCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCAc                                                                                                                  <  1:1774356/140‑1 (MQ=255)

                    cgcgcTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTgg                                                                                                              <  2:372979/140‑1 (MQ=255)

                     gcgcTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGc                                                                                                             >  2:2280124/1‑140 (MQ=255)

                      cgcTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGcc                                                                                                            >  2:1420251/1‑140 (MQ=255)

                      cgcTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGcc                                                                                                            >  2:1219770/1‑140 (MQ=255)

                        cTGCCAGCCGAGGTCAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCtt                                                                                                          <  2:1040209/140‑1 (MQ=255)

                        cTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCtt                                                                                                          <  1:2103712/140‑1 (MQ=255)

                          gCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCa                                                                                                        <  1:1706045/140‑1 (MQ=255)

                          gCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCa                                                                                                        <  2:1766362/140‑1 (MQ=255)

                          gCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCa                                                                                                        <  2:1173722/140‑1 (MQ=255)

                           ccAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCAc                                                                                                       >  2:2195770/1‑140 (MQ=255)

                             aGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCg                                                                                                     >  2:676984/1‑140 (MQ=255)

                              gCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGt                                                                                                    <  1:350502/140‑1 (MQ=255)

                              gCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGt                                                                                                    <  2:1320058/140‑1 (MQ=255)

                              gCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGt                                                                                                    <  1:1115271/140‑1 (MQ=255)

                                  aGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGtccat                                                                                                <  2:277500/140‑1 (MQ=255)

                                   ggACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGtccatc                                                                                               >  2:1554566/1‑140 (MQ=255)

                                   ggACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGtccatc                                                                                               <  1:2280124/140‑1 (MQ=255)

                                   ggACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGtccatc                                                                                               <  2:1303807/140‑1 (MQ=255)

                                     aCAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGtccatcca                                                                                             >  2:1758564/1‑140 (MQ=255)

                                          aTCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCa                                                                                        <  1:1135673/140‑1 (MQ=255)

                                                 gCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTc                                                                                 >  2:1546191/1‑140 (MQ=255)

                                                   cGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCaa                                                                               <  2:1471434/140‑1 (MQ=255)

                                                     tCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAAc                                                                             <  1:749456/140‑1 (MQ=255)

                                                     tCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAAc                                                                             <  2:971924/140‑1 (MQ=255)

                                                     tCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAAc                                                                             >  2:1967717/1‑140 (MQ=255)

                                                      cAGAGGCTGACCGTCGGGCCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACa                                                                            >  2:1187646/1‑140 (MQ=255)

                                                         agGCTGACCGTCGGGCCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGAt                                                                         <  1:1187646/140‑1 (MQ=255)

                                                         agGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGAt                                                                         <  1:1554566/140‑1 (MQ=255)

                                                         agGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGAt                                                                         <  2:2151616/140‑1 (MQ=255)

                                                         agGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGAt                                                                         <  1:1437621/140‑1 (MQ=255)

                                                          ggCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATc                                                                        <  1:2209252/140‑1 (MQ=255)

                                                          ggCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATc                                                                        >  1:1334758/1‑140 (MQ=255)

                                                                ccGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGcac                                                                  >  2:1611745/1‑140 (MQ=255)

                                                                    cGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATc                                                              >  2:2245498/1‑140 (MQ=255)

                                                                      gACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTg                                                            <  2:1926405/140‑1 (MQ=255)

                                                                        ccACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTgcg                                                          <  1:1758564/140‑1 (MQ=255)

                                                                        ccACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTgcg                                                          <  2:1456956/140‑1 (MQ=255)

                                                                        ccACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTgcg                                                          <  1:1112218/140‑1 (MQ=255)

                                                                        ccACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTgcg                                                          <  1:2060368/140‑1 (MQ=255)

                                                                         cACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTgcgc                                                         <  1:430252/140‑1 (MQ=255)

                                                                           cTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCgg                                                       >  2:595401/1‑140 (MQ=255)

                                                                            tGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGc                                                      <  1:808135/140‑1 (MQ=255)

                                                                             gCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCa                                                     <  1:676984/140‑1 (MQ=255)

                                                                              cAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAg                                                    >  1:1538258/1‑140 (MQ=255)

                                                                              cAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAg                                                    >  2:1859888/1‑140 (MQ=255)

                                                                                 aCCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTAt                                                 <  2:1538258/140‑1 (MQ=255)

                                                                                     cTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATtctc                                             >  1:122288/1‑140 (MQ=255)

                                                                                      tACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTctcc                                            >  1:2167257/1‑140 (MQ=255)

                                                                                      tACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTctcc                                            >  2:1416322/1‑140 (MQ=255)

                                                                                      tACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTctcc                                            >  1:979222/1‑140 (MQ=255)

                                                                                             aTGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTAtt                                                <  1:2034967/129‑1 (MQ=255)

                                                                                             aTGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTAtt                                                >  2:2034967/1‑129 (MQ=255)

                                                                                             aTGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCt                                     >  1:115903/1‑140 (MQ=255)

                                                                                                     tataGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCggg                             <  1:1416322/140‑1 (MQ=255)

                                                                                                     tataGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCggg                             <  2:2228354/140‑1 (MQ=255)

                                                                                                      ataGCGCTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGt                            <  1:1967717/140‑1 (MQ=255)

                                                                                                         gcgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGGGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGa                         <  2:1093755/140‑1 (MQ=255)

                                                                                                         gcgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGa                         <  1:1001154/140‑1 (MQ=255)

                                                                                                         gcgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCC‑CCACCTTTTGCGGGTCGAg                        <  1:2245498/140‑1 (MQ=255)

                                                                                                          cgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCa                                        >  1:2254517/1‑124 (MQ=255)

                                                                                                          cgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCa                                        <  2:2254517/124‑1 (MQ=255)

                                                                                                          cgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAg                        <  2:2167257/140‑1 (MQ=255)

                                                                                                          cgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAg                        <  2:979222/140‑1 (MQ=255)

                                                                                                          cgcTTGCCGCCGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAg                        <  2:1469339/140‑1 (MQ=255)

                                                                                                               gccgccGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTAc                   >  1:777592/1‑140 (MQ=255)

                                                                                                               gccgccGTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTAc                   >  1:1637467/1‑140 (MQ=255)

                                                                                                                    cgTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTggg              >  1:1368293/1‑140 (MQ=255)

                                                                                                                     gTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGt             <  2:1368293/140‑1 (MQ=255)

                                                                                                                     gTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGt             <  1:292250/140‑1 (MQ=255)

                                                                                                                     gTCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGt             <  1:1219770/140‑1 (MQ=255)

                                                                                                                      tCCAGTATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTc            <  1:2234872/140‑1 (MQ=255)

                                                                                                                           tATCTCCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTAt       <  1:1859888/140‑1 (MQ=255)

                                                                                                                             tctcCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCGCCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGa     <  2:122288/140‑1 (MQ=255)

                                                                                                                             tctcCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGa     >  1:1917286/1‑140 (MQ=255)

                                                                                                                             tctcCCAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGa     <  2:2227054/140‑1 (MQ=255)

                                                                                                                                cccAGCTTTCAGTCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGAttg  >  2:1463306/1‑140 (MQ=255)

                                                                                                                                cccAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGAttg  >  1:2203010/1‑140 (MQ=255)

                                                                                                                                cccAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGAttg  >  1:1906519/1‑140 (MQ=255)

                                                                                                                                cccAGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGAttg  >  2:1091886/1‑140 (MQ=255)

                                                                                                                                   aGCTTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCTCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGt             <  2:149485/126‑1 (MQ=255)

TGCCGTTTTCGGGTCAACCGCGCGCTGCCAGCCGAGGACAAAATCCTCTGCCGTCAGAGGCTGACCGTCGGACCACTGCAAACCGCTACGCAGATGGAAAATATAGCGCTTGCCGCCGTCCAGTATCTCCCAGCGTTCAGCCTGAGCGGGCTGCACCTGGCCTTCACCGTCCATCCATACCAGACCTTCAAACAGATCCAGCACAATCTGCGCGGCAGTATTCTCCTCCACCTTTTGCGGGTCGAGCGTACCTGGGTCGCTATGATTG  >  NC_000913/3167338‑3167605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`