Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,926,3660AC22.8% 287.8 / 26.1 123G30G (GGT→GGG) mioCflavoprotein MioC
Reads supporting (aligned to +/- strand):  ref base A (63/32);  new base C (0/28);  total (63/60)
Fisher's exact test for biased strand distribution p-value = 2.69e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 134 total aligned reads displayed.

TGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGT  >  NC_000913/3926229‑3926503
                                                                                                                                            |                                                                                                                                          
tGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑cc                                                                                                                                         >  1:956022/1‑140 (MQ=255)
       gCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCctct                                                                                                                                  >  2:691522/1‑140 (MQ=255)
         aaTGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTc                                                                                                                                >  1:530387/1‑140 (MQ=255)
            gCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCa                                                                                                                              >  2:871152/1‑139 (MQ=255)
            gCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAg                                                                                                                             >  2:530333/1‑140 (MQ=255)
                cATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTc                                                                                                                                <  1:187178/133‑1 (MQ=255)
                cATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTc                                                                                                                                >  2:187178/1‑133 (MQ=255)
                cATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCttt                                                                                                                         >  2:1682771/1‑140 (MQ=255)
                 aTAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCtttt                                                                                                                        <  1:75727/140‑1 (MQ=255)
                      aaggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGcc                                                                                                                   <  2:793208/140‑1 (MQ=255)
                       aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCa                                                                                                                  >  1:761990/1‑140 (MQ=255)
                        ggagaaaggTTGTCCGGAATATCTCCGGCACAGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAg                                                                                                                 >  2:694915/1‑140 (MQ=255)
                          agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               >  1:857333/1‑140 (MQ=255)
                          agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               >  1:880199/1‑140 (MQ=255)
                          agaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgt                                                                                                               >  2:1734892/1‑140 (MQ=255)
                           gaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtg                                                                                                              <  1:691522/140‑1 (MQ=255)
                           gaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtg                                                                                                              <  2:761990/140‑1 (MQ=255)
                            aaaggTTGTCCGGAATATCTCCGGCCCCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTACAGCTTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             <  2:1308316/140‑1 (MQ=255)
                            aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             >  2:216620/1‑140 (MQ=255)
                            aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                             <  1:1696150/140‑1 (MQ=255)
                             aaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  2:503143/140‑1 (MQ=255)
                             aaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  1:1734892/140‑1 (MQ=255)
                             aagcTTTTCGGGAATATTGCCGGAACCGTGGGTGCACCTGCTACCTACCC‑AAAGCCAGGAGCGAGT‑TAACCCTAATAAC‑GCGGAGCCGTCCGGCTTTTTGTGGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                            <  2:1624533/140‑1 (MQ=255)
                                gTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCGGATACCCAGCC‑AGACCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGC‑CCGTGCAGCTTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTg                                                                                                         <  2:1425586/140‑1 (MQ=255)
                                 ttGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGc                                                                                                        >  2:368255/1‑140 (MQ=255)
                                  tGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCt                                                                                                       <  1:638880/140‑1 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCTCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCGCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  1:1816402/1‑140 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCt                                                                                                       >  1:420334/1‑139 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  2:2499/1‑140 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  1:855490/1‑140 (MQ=255)
                                   gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                      >  2:912207/1‑140 (MQ=255)
                                    tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                     <  2:918844/140‑1 (MQ=255)
                                    tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                     <  1:1446301/140‑1 (MQ=255)
                                      cGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACat                                                                                                   >  2:39649/1‑140 (MQ=255)
                                           tatCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGGGTTCTGCTACATATTCg                                                                                              >  2:1377497/1‑140 (MQ=255)
                                                 cGGCCCCGTGGGTGGCCCTGAAAACCGGCC‑AGCCCCCTG‑GGCGGGTTAAATTTTCTAACCGCGGC‑CGGGGCAGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccg                                                                                        <  2:1189645/140‑1 (MQ=255)
                                                   gCACGGGGGGGGGGGCTGATACCCAGCC‑AGACCCCTGAGGCAGG‑TAAATCTTCTAACGGCGGA‑CCGTGCAGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgcc                                                                                      <  2:109646/140‑1 (MQ=255)
                                                   gCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgtc                                                                                      <  1:2499/140‑3 (MQ=255)
                                                    cACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgccg                                                                                     >  1:1571292/1‑140 (MQ=255)
                                                       cGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑ACCGCCTCTTCCCGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgg                                                                                  >  2:1690360/1‑140 (MQ=255)
                                                        gtgggtggAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAggg                                                                                 >  2:1116956/1‑140 (MQ=255)
                                                        gtgggtggAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCCTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAggg                                                                                 >  1:79786/1‑140 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgggg                                                                                >  1:109646/1‑139 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgggg                                                                                >  1:1533958/1‑139 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  1:1157745/1‑140 (MQ=255)
                                                         tgggtggAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                                >  1:1431791/1‑140 (MQ=255)
                                                             gggggCTGATACCCAGCC‑AGATCCCTGAGGCGGG‑AAAATCTTCTAACAGCGGC‑CCGTGCGGCGTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGtgctg                                                                            <  2:1333161/136‑1 (MQ=255)
                                                             gggAGCTGAAACCCACCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACCGCGGA‑CGGTGCAGCTTTTGGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTTTTCTGCTACATATTCGGCACCGCCGAGGGtgctg                                                                            <  2:1751259/139‑1 (MQ=255)
                                                               gAGTTGAAACCCAGCC‑AGCTCCCAGAGGGAGA‑TAACTCTCATAACGGCGGG‑CCGGGCGGAGTTGCGGGGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGcc                                                                          <  2:518698/140‑1 (MQ=255)
                                                                aacggaaaaCCAGCCAAGATCCCGGGGGAAGA‑TAATTCTTAAAACAGCGGC‑CCGGGGGGTGTTGGGGTGAAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGcc                                                                          <  2:1378167/133‑1 (MQ=255)
                                                                  cTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCt                                                                       >  2:1273651/1‑140 (MQ=255)
                                                                   tGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTg                                                                      >  1:1571748/1‑140 (MQ=255)
                                                                   tGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTg                                                                      >  1:1218429/1‑140 (MQ=255)
                                                                     aaacccagcc‑agACCCCTGAGGCAGG‑AAATTCTTCTAACAGCGGC‑CCGTGCAGCTTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:1431791/136‑1 (MQ=255)
                                                                     aaacccagcc‑agACCCCGGAGCCAGT‑AAAATCTTCAAACAGCGGC‑CCGGGCAGGTTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:1175856/136‑1 (MQ=255)
                                                                     aaacccagcc‑aaACCCTGGAGGAAGA‑AAAATTTTTTAACGGGGGC‑CCGTGGGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:880199/136‑1 (MQ=255)
                                                                     aaacccaccc‑agATCCCGGAGGCAGG‑AAAATCTTCAAACGGCGGC‑CGGTGCAGCGTTTCGGTGTAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:1157745/136‑1 (MQ=255)
                                                                     aTAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  1:1116956/140‑1 (MQ=255)
                                                                     aTAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    >  1:711801/1‑140 (MQ=255)
                                                                     aTAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  1:694915/140‑1 (MQ=255)
                                                                     aTAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    >  2:1140101/1‑140 (MQ=255)
                                                                     aTAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGGAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    >  1:1177087/1‑140 (MQ=255)
                                                                     aTAACCAGCC‑AGATCCCGGAGGCAGG‑AAAATCTTCAAACGGCGGC‑CGGTGCGGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                                    <  2:1025072/140‑1 (MQ=255)
                                                                            gcc‑agATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                             >  1:741337/1‑140 (MQ=255)
                                                                            gcc‑agATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCATCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                             <  2:531635/140‑1 (MQ=255)
                                                                              c‑agATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGat                                                           <  1:998805/140‑1 (MQ=255)
                                                                                agATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGGGCTGCCGCTGATAagagctgtc                                                          >  1:1378167/1‑135 (MQ=255)
                                                                                        gAGGCAGG‑TGAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCAt                                                  >  2:1481536/1‑140 (MQ=255)
                                                                                              gg‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCa                                                   <  1:556814/133‑1 (MQ=255)
                                                                                              gg‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCa                                                   >  2:556814/1‑133 (MQ=255)
                                                                                              gg‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                            >  1:880904/1‑140 (MQ=255)
                                                                                               g‑TAAATCTTCTAACGGCGGC‑CCGTGCAGCTTTTGGGGGAAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:711801/140‑1 (MQ=255)
                                                                                               g‑TAAATCTTCTAACAGCGGC‑CCGTGCAGCTTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  1:1034539/140‑1 (MQ=255)
                                                                                                taaatttttctAACGGCGGA‑CGGTGCAGCTTTTGGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:1627340/133‑1 (MQ=255)
                                                                                                acagtttttcaAACGGCGGC‑CCGTGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                           <  2:1683266/133‑1 (MQ=255)
                                                                                                  aatttttcaAACGGCGGC‑CCGTCAGGCGTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCa                                         <  2:1571748/135‑1 (MQ=255)
                                                                                                  aaaTCTTCTAACAGGGGC‑CCGTGCGGCTTTTGGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCa                                         <  1:530333/140‑1 (MQ=255)
                                                                                                    tttttcaAACGGCGGC‑CCGGGC‑GGGTTTGGGGGGGAAAACCCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCAcc                                       <  1:1377497/137‑1 (MQ=255)
                                                                                                        tctAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTtta                                   >  1:1627340/1‑140 (MQ=255)
                                                                                                          tAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                                 >  1:1748419/1‑140 (MQ=255)
                                                                                                           aaCAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatta                                >  1:1678787/1‑140 (MQ=255)
                                                                                                              ggCGGA‑CGGTGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAaga                             <  2:1748419/139‑1 (MQ=255)
                                                                                                               gCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttattactgt                            >  1:1683266/1‑136 (MQ=255)
                                                                                                                cGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAagagg                           >  1:292104/1‑139 (MQ=255)
                                                                                                                cGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                           >  1:1730910/1‑140 (MQ=255)
                                                                                                                cGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGt                           >  1:1266863/1‑140 (MQ=255)
                                                                                                                  ggccggTGCAG‑GTTTGGGGGGAAAAACCCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                          <  2:855490/135‑1 (MQ=255)
                                                                                                                  gA‑CCGTGCAGCGTTTCG‑‑GGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCg                       >  2:1433662/1‑140 (MQ=255)
                                                                                                                    cgggTGCGGCTTTTGGGTGAAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  2:356555/137‑1 (MQ=255)
                                                                                                                    ccggTGCAGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  2:1218429/137‑1 (MQ=255)
                                                                                                                    cccGGGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                        <  2:1509460/139‑1 (MQ=255)
                                                                                                                        tGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAt                    >  1:1220880/1‑140 (MQ=255)
                                                                                                                         gCAGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTAtt                   <  1:1152727/140‑1 (MQ=255)
                                                                                                                              ttttGGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATCCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACg              <  2:1533958/139‑1 (MQ=255)
                                                                                                                              ttttGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACg              <  2:880904/139‑1 (MQ=255)
                                                                                                                                  cGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGcctg          >  1:356555/1‑137 (MQ=255)
                                                                                                                                  cGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtgt          >  2:60844/1‑140 (MQ=255)
                                                                                                                                     tggtAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGaa       <  1:60844/140‑1 (MQ=255)
                                                                                                                                     tggaAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGaa       <  1:1481536/140‑1 (MQ=255)
                                                                                                                                          aaa‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGGTATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGt  <  1:368255/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                          
TGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC‑AGATCCCTGAGGCAGG‑TAAATCTTCTAACAGCGGA‑CCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAACGCGT  >  NC_000913/3926229‑3926503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑