Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,417,724	C→A	D14Y (GAC→TAC)	racC ←	Rac prophage; protein RacC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,417,724	0	C	A	100.0%	244.0 / NA	69	D14Y (GAC→TAC)	racC	Rac prophage; protein RacC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (35/34);  total (35/34)

TGACACCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTCATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCATCTGG  >  NC_000913/1417589‑1417859                                                                                                                                        |                                                                                                                                        tGACACCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCg                                                                                                                                     <  2:538367/140‑1 (MQ=255) tGACACCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCg                                                                                                                                     <  2:1093722/140‑1 (MQ=255) tGACACCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCg                                                                                                                                     <  2:1250021/140‑1 (MQ=255) tGACACCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCg                                                                                                                                     <  2:532813/140‑1 (MQ=255)   acacCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGt                                                                                                                                   <  2:1692946/140‑1 (MQ=255)   acacCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGt                                                                                                                                   <  2:176089/140‑1 (MQ=255)   acacCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGt                                                                                                                                   <  1:1046891/140‑1 (MQ=255)        ttCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCg                                                                                                                                     >  1:1247297/1‑133 (MQ=255)        ttCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCg                                                                                                                                     <  2:1247297/133‑1 (MQ=255)         tcatcaAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTac                                                                                                                             >  2:90621/1‑140 (MQ=255)               aGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGt                                                                                                                       <  2:652244/140‑1 (MQ=255)                 tgtTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGt                                                                                                                       >  1:1280358/1‑138 (MQ=255)                 tgtTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGt                                                                                                                       <  2:1280358/138‑1 (MQ=255)                  gtTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGc                                                                                                                    >  1:950202/1‑140 (MQ=255)                  gtTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGc                                                                                                                    >  2:670681/1‑140 (MQ=255)                    ttttACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCtt                                                                                                                  <  2:1501219/140‑1 (MQ=255)                           ttGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAAtt                                                                                                           >  2:309780/1‑140 (MQ=255)                              ccTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGt                                                                                                        >  2:1559005/1‑140 (MQ=255)                               cTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTa                                                                                                       <  1:309780/140‑1 (MQ=255)                                        cATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGttt                                                                                              <  2:1290395/140‑1 (MQ=255)                                             atatCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTtctc                                                                                         >  2:535131/1‑140 (MQ=255)                                              tatCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTcc                                                                                        <  1:691471/140‑1 (MQ=255)                                              tatCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTcc                                                                                        <  1:90621/140‑1 (MQ=255)                                              tatCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTcc                                                                                        <  2:851650/140‑1 (MQ=255)                                              tatCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTcc                                                                                        <  1:1403514/140‑1 (MQ=255)                                                tCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCtt                                                                                      <  1:670681/140‑1 (MQ=255)                                                  aaCCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCttaa                                                                                    >  2:1526480/1‑140 (MQ=255)                                                        aGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGGTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAgg                                                                              >  1:1040620/1‑140 (MQ=255)                                                        aGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAgg                                                                              >  2:370774/1‑140 (MQ=255)                                                        aGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAgg                                                                              >  1:978463/1‑140 (MQ=255)                                                         gTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGt                                                                             <  1:1071567/140‑1 (MQ=255)                                                          tGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGtt                                                                            <  1:1526480/140‑1 (MQ=255)                                                            aaTGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGa                                                                          >  2:75294/1‑140 (MQ=255)                                                                  gTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAAt                                                                    >  1:973873/1‑140 (MQ=255)                                                                  gTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAAt                                                                    >  2:1600278/1‑140 (MQ=255)                                                                    ttCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATAc                                                                  >  2:1136353/1‑140 (MQ=255)                                                                      cTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCt                                                                >  1:1343929/1‑140 (MQ=255)                                                                           ttttCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCAt                                                           >  2:1511875/1‑140 (MQ=255)                                                                           ttttCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCAt                                                           >  2:1566650/1‑140 (MQ=255)                                                                               cTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCt                                                       <  1:1559005/140‑1 (MQ=255)                                                                               cTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCt                                                       <  1:1511875/140‑1 (MQ=255)                                                                                 gTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTgg                                                     <  2:973873/140‑1 (MQ=255)                                                                                    ttAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCAt                                                  <  1:1563213/140‑1 (MQ=255)                                                                                    ttAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCAt                                                  <  1:1136353/140‑1 (MQ=255)                                                                                         tACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAAtt                                             <  2:950202/140‑1 (MQ=255)                                                                                                ccAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGc                                                    >  2:223509/1‑126 (MQ=255)                                                                                                ccAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGc                                                    <  1:223509/126‑1 (MQ=255)                                                                                                ccAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTc                                      >  2:188973/1‑140 (MQ=255)                                                                                                ccAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTc                                      >  1:869636/1‑140 (MQ=255)                                                                                                   aTGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGaa                                   >  2:1813366/1‑140 (MQ=255)                                                                                                    tGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGaa                                   <  1:488514/139‑1 (MQ=255)                                                                                                    tGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGaa                                   >  2:488514/1‑139 (MQ=255)                                                                                                    tGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAAt                                  >  2:530085/1‑140 (MQ=255)                                                                                                     gcgcTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATa                                 <  1:1813366/140‑1 (MQ=255)                                                                                                        cTTTCCTTCCAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTc                              >  1:1371932/1‑140 (MQ=255)                                                                                                          ttccttccAGATTCACCTCGTGAACAATGTAATCGGTATTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCaa                            >  1:563703/1‑140 (MQ=255)                                                                                                          ttccttccAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCaa                            >  1:1291993/1‑140 (MQ=255)                                                                                                          ttccttccAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCCGGCATAAATTCAGTTTCGAATAGTCaa                            >  2:1158579/1‑140 (MQ=255)                                                                                                                 cAGATTCACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAattaatta                     <  1:1566650/140‑1 (MQ=255)                                                                                                                       cACCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTc               <  2:978463/140‑1 (MQ=255)                                                                                                                        aCCTCGTGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCa              >  1:1041783/1‑140 (MQ=255)                                                                                                                              tGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAAttaattaa                    >  2:199716/1‑128 (MQ=255)                                                                                                                              tGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAAttaattaa                    <  1:199716/128‑1 (MQ=255)                                                                                                                              tGAACAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGcc        >  1:1766903/1‑140 (MQ=255)                                                                                                                                aaCAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCAt      <  2:1766903/140‑1 (MQ=255)                                                                                                                                 aCAATGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCATc     <  2:1291993/140‑1 (MQ=255)                                                                                                                                    aTGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCATCTgg  >  2:591092/1‑140 (MQ=255)                                                                                                                                    aTGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCATCTgg  >  1:839003/1‑140 (MQ=255)                                                                                                                                    aTGTAATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCATCTgg  >  1:1085997/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                        TGACACCTTCATCAAGTGTTTTTACGTTGCCTGATGGACCATCGATATCAACCACAGTGAATGGGGTTTCTTTATTTTCTGTTTTAATTACGTAGCCAATGCGCTTTCCTTCCAGATTCACCTCGTGAACAATGTCATCGGTAGTTACAACAGTGGCTTCATAATTGGTAATCATGTTTTTCTCCTTAATTAAGGTTGAGCGAATACCTGCCATTTCTGGCATAAATTCAGTTTCGAATAGTCAATTAATTAAAGTTCATGTGCCATCTGG  >  NC_000913/1417589‑1417859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑