BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,984,070	C→A	G19W (GGG→TGG)	kduI ←	5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,984,070	0	C	A	100.0%	392.0 / NA	109	G19W (GGG→TGG)	kduI	5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (50/59); total (50/59)

Only 100 of 110 total aligned reads displayed.

CAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATA  >  NC_000913/2983935‑2984206

cAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTgg                                                                                                                                      <  1:432386/140‑1 (MQ=255)

cAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTgg                                                                                                                                      >  1:935091/1‑140 (MQ=255)

     tCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATc                                                                                                                                 >  2:461565/1‑140 (MQ=255)

     tCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATc                                                                                                                                 <  1:541008/140‑1 (MQ=255)

      ccccGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATcc                                                                                                                                >  1:698942/1‑140 (MQ=255)

              aCGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGtttt                                                                                                                        >  2:1399681/1‑140 (MQ=255)

                    aCCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTtgcgtg                                                                                                                  <  2:902305/140‑1 (MQ=255)

                    aCCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTtgcgtg                                                                                                                  <  2:695405/140‑1 (MQ=255)

                        ttttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCa                                                                                                                               <  1:1114236/123‑1 (MQ=255)

                        ttttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCa                                                                                                                               >  2:1114236/1‑123 (MQ=255)

                        ttttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCa                                                                                                              <  2:935091/140‑1 (MQ=255)

                        ttttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCa                                                                                                              <  1:1479946/140‑1 (MQ=255)

                         tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCAc                                                                                                             <  2:1187652/140‑1 (MQ=255)

                         tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCAc                                                                                                             <  2:1054661/140‑1 (MQ=255)

                         tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCAc                                                                                                             <  1:1222903/140‑1 (MQ=255)

                             gTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACtgtg                                                                                                         <  2:604125/140‑1 (MQ=255)

                              ttATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTgg                                                                                                        <  2:618043/140‑1 (MQ=255)

                               tATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGa                                                                                                       <  2:318998/140‑1 (MQ=255)

                                aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGAt                                                                                                      >  2:662830/1‑140 (MQ=255)

                                aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGAt                                                                                                      >  2:479601/1‑140 (MQ=255)

                                aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGAt                                                                                                      >  1:1472520/1‑140 (MQ=255)

                                   ggCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGct                                                                                                   <  1:1443986/140‑1 (MQ=255)

                                    gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc                                                                                                  <  1:933090/140‑1 (MQ=255)

                                    gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGctc                                                                                                  <  2:698942/140‑1 (MQ=255)

                                        aaTGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTc                                                                                              <  2:1665511/140‑1 (MQ=255)

                                         aTGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCt                                                                                             <  2:234534/140‑1 (MQ=255)

                                          tGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCtt                                                                                            <  1:1812652/140‑1 (MQ=255)

                                          tGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCtt                                                                                            <  1:1399681/140‑1 (MQ=255)

                                             cgccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACg                                                                                         <  2:1251918/140‑1 (MQ=255)

                                               ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTc                                                                                       >  2:82374/1‑140 (MQ=255)

                                               ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTc                                                                                       >  1:1459356/1‑140 (MQ=255)

                                                caacaaTAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTcc                                                                                      <  1:82374/140‑1 (MQ=255)

                                                    aataatTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACAt                                                                                  <  1:177461/140‑1 (MQ=255)

                                                        atTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAAc                                                                              <  1:1730105/140‑1 (MQ=255)

                                                        atTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAAc                                                                              <  2:238579/140‑1 (MQ=255)

                                                           cGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTc                                                                           >  2:1773919/1‑140 (MQ=255)

                                                              tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa                                                                        >  1:1207054/1‑140 (MQ=255)

                                                              tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa                                                                        >  1:979117/1‑140 (MQ=255)

                                                              tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa                                                                        >  2:567678/1‑140 (MQ=255)

                                                              tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa                                                                        >  2:198119/1‑140 (MQ=255)

                                                              tCAATGTGGCTGCAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa                                                                        >  1:799832/1‑140 (MQ=255)

                                                                      gCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGt                                                                <  2:1459356/140‑1 (MQ=255)

                                                                        tGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCGAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATaa                                                                     <  2:1592455/133‑1 (MQ=255)

                                                                        tGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCGAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATaa                                                                     >  1:1592455/1‑133 (MQ=255)

                                                                        tGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCg                                                                         <  2:1319541/129‑1 (MQ=255)

                                                                        tGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCg                                                                         >  1:1319541/1‑129 (MQ=255)

                                                                                   gtgtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAAt                                                   >  1:153612/1‑140 (MQ=255)

                                                                                    tgtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATa                                                  >  2:1502515/1‑140 (MQ=255)

                                                                                    tgtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATa                                                  >  1:1667136/1‑140 (MQ=255)

                                                                                     gtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa                                                    >  1:908206/1‑137 (MQ=255)

                                                                                     gtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa                                                    <  2:908206/137‑1 (MQ=255)

                                                                                      tACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGa                                                >  1:1023805/1‑140 (MQ=255)

                                                                                      tACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGa                                                >  1:222955/1‑140 (MQ=255)

                                                                                        cTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGaaa                                              >  2:1504942/1‑140 (MQ=255)

                                                                                         tCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGaaaa                                             >  2:31078/1‑140 (MQ=255)

                                                                                           aTCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACg                                           >  1:194566/1‑140 (MQ=255)

                                                                                            tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          <  1:969592/140‑1 (MQ=255)

                                                                                            tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          <  1:662830/140‑1 (MQ=255)

                                                                                            tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          <  2:979117/140‑1 (MQ=255)

                                                                                            tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          <  2:153612/140‑1 (MQ=255)

                                                                                            ccggcggAAAATCCCTTTTCAGCGAAAAATTCATTGCGCAGACATTGGGTAGCCAGCGTTTTTGCGTGCGCACTGGGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          <  2:669726/139‑1 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa                                                    <  1:946092/129‑1 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa                                                    >  2:1522193/1‑129 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa                                                    >  2:946092/1‑129 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa                                                    <  1:1522193/129‑1 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          <  1:1678355/139‑1 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa                                          >  2:1678355/1‑139 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGAt                                         >  2:1039007/1‑140 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGAt                                         >  1:1174858/1‑140 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGAt                                         >  1:1277081/1‑140 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGAt                                         >  2:731578/1‑140 (MQ=255)

                                                                                             cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGAt                                         >  2:728822/1‑140 (MQ=255)

                                                                                              ggCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATa                                        >  1:165682/1‑140 (MQ=255)

                                                                                              ggCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATa                                        >  1:679421/1‑140 (MQ=255)

                                                                                                cGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGt                                      >  1:1476366/1‑140 (MQ=255)

                                                                                                cGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGt                                      >  2:1201564/1‑140 (MQ=255)

                                                                                                cGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGAGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGt                                      >  1:1059582/1‑140 (MQ=255)

                                                                                                    aaaTACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGaaa                                  <  1:393867/140‑1 (MQ=255)

                                                                                                     aaTACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAac                                 >  2:1584165/1‑140 (MQ=255)

                                                                                                     aaTACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAac                                 <  1:479601/140‑1 (MQ=255)

                                                                                                      aTACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAaca                                <  1:1504942/140‑1 (MQ=255)

                                                                                                      aTACCTTTTCAACCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAaca                                <  1:728822/140‑1 (MQ=255)

                                                                                                                aaCCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtt                      <  2:194566/140‑1 (MQ=255)

                                                                                                                aaCCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtt                      <  2:92666/140‑1 (MQ=255)

                                                                                                                aaCCAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtt                      <  2:799832/140‑1 (MQ=255)

                                                                                                                  ccAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtttt                    <  1:1438494/140‑1 (MQ=255)

                                                                                                                  ccAAAAATTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtttt                    <  1:198119/140‑1 (MQ=255)

                                                                                                                    aaaaaTTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtct                  <  2:1590122/140‑1 (MQ=255)

                                                                                                                    aaaaaTTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtct                  <  2:1023805/140‑1 (MQ=255)

                                                                                                                     aaaaTTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtctc                 <  1:461565/140‑1 (MQ=255)

                                                                                                                        aTTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtat              <  1:567678/140‑1 (MQ=255)

                                                                                                                        aTTCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtat              <  2:247247/140‑1 (MQ=255)

                                                                                                                         ttCATTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtata             <  1:31078/140‑1 (MQ=255)

                                                                                                                            aTTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtct                  >  1:1520039/1‑132 (MQ=255)

                                                                                                                            aTTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtct                  <  2:1520039/132‑1 (MQ=255)

                                                                                                                            aTTGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAg          >  1:892659/1‑140 (MQ=255)

                                                                                                                              tGCGCAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAggg        <  2:324278/140‑1 (MQ=255)

                                                                                                                                cgcAGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGgat      >  2:352699/1‑140 (MQ=255)

                                                                                                                                   aGCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGgatgat   <  2:679421/140‑1 (MQ=255)

                                                                                                                                    gCCATTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGata  <  1:1502515/140‑1 (MQ=255)

CAACTTCCCCGCCAACGGAAACCGTTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATA  >  NC_000913/2983935‑2984206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`