BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	689,521	G→T	P454Q (CCG→CAG)	lnt ←	apolipoprotein N‑acyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	689,521	0	G	T	100.0%	211.3 / NA	64	P454Q (CCG→CAG)	lnt	apolipoprotein N‑acyltransferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (49/15); total (49/15)

Only 100 of 103 total aligned reads displayed.

AACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGT  >  NC_000913/689384‑689657

aaCCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCtgg                                                                                                                                        <  2:1029709/140‑1 (MQ=255)

     aaCAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAAt                                                                                                                                   >  1:753672/1‑140 (MQ=255)

     aaCAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAAt                                                                                                                                   >  1:511641/1‑140 (MQ=255)

        aaTGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTAGGTGCGTATGGTGTGAGTCCGGTGGCCGGGGCCCCGTTAGTGGTTAACCCCTCGGGGGTGAACGGGGGGATCATCGCCTGAATCCCCCCCTGCTGCCAAATCAc                                                                                                                                <  2:1454598/140‑1 (MQ=255)

            ccGTCAGCACCCACAGCGGCCAGTTGCCAGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCAccgcc                                                                                                                            >  1:1196348/1‑140 (MQ=255)

               ccaccccccACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTGGGCGTCACGTTAGTGGTTACCCCCTCGGGGGTGAACGGGGGGATCACCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTa                                                                                                                         <  2:753672/134‑1 (MQ=255)

                caccccccACGGCGGCAGGTGGCCGGTAGGTGTGTATGGTGTGGGTCGGGGGGGGGGCCTCCCGTTGGTGGTTAACACCTCGCGGGTGACCGGGGGGATCACCGCCTCATCCTCCCCCGGCTGGCCATGCACCGCCGTaa                                                                                                                        <  2:1583892/135‑1 (MQ=255)

                caccccccACAGCGGCCAGTGGCCGGTACGTGCGTATGGTGTGAGTCGGGTGGTCGGCGTCACGTTAGTGGTTAACCCCTCGGGGGTGAACTGGGGGATCACCGCCTGAATCCCCCCCTGCTGGCCAATCACCGCCGTaa                                                                                                                        <  2:354876/135‑1 (MQ=255)

                 aGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAAt                                                                                                                       >  1:1176520/1‑140 (MQ=255)

                     cccACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCg                                                                                                                   >  2:742283/1‑140 (MQ=255)

                      ccACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCgt                                                                                                                  >  1:545545/1‑140 (MQ=255)

                        acaGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCgttg                                                                                                                >  1:1201006/1‑140 (MQ=255)

                            gggCCAGTTGCGGGTACGTGCGTATGGTGTGAGTCGGGTGGCCGGCGTCACGTTAGTGGTAAACCCCTCGCGGGTGAACTGGGGGATCATCGCCTGAATCCCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTgg                                                                                                            <  2:945763/139‑1 (MQ=255)

                            gggCCAGTGGCGGGTACGTGCGTATGGTGTGAGCCGGGTGGTCGGGGTCACGTTAGTGGTAAACCCCTCGCGGGTGAACGGGGGGATCACCGCCTGAATCCCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTgg                                                                                                            <  2:1641122/139‑1 (MQ=255)

                            cGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCGGGGGGTCGGCGTCACGTTAGTGGTTAACCCCTCGGGGGTGAACTGGGGGATCATCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTgg                                                                                                            <  2:1502005/140‑1 (MQ=255)

                            cGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTgg                                                                                                            >  2:1657291/1‑140 (MQ=255)

                                cAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCCCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGtgct                                                                                                        >  2:105326/1‑140 (MQ=255)

                                             gTGCGTATGGTGTGAGTCGGGGGGTCGGCGCCACGTTAGTGGTTACCCCCCCGCGGGTGAACTGCGGGATCACCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTggg                                                                                           <  2:1029351/140‑1 (MQ=255)

                                              ggCGTATGGTGGGAGTCGGGTGGTCGGCGTCACGTTAGTGGTTACCCCCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGgc                                                                                          <  2:511641/139‑1 (MQ=255)

                                               gCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGGTCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGgcg                                                                                         >  1:1813905/1‑140 (MQ=255)

                                                cGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGgcgc                                                                                        >  2:1606586/1‑140 (MQ=255)

                                                   ttGGTGTGAGTCGGGTGGTGGGCGTCACTTTAGGGGTTAACCCCTCGGGGGTGAACGGGGGGATCATCGCCTGAATCTCCCCCTGCTGGCAAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGcc                                                                                     <  2:1176520/139‑1 (MQ=255)

                                                   aTGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCACCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGcc                                                                                     >  2:391861/1‑140 (MQ=255)

                                                        gtgAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTc                                                                                <  1:1657291/140‑1 (MQ=255)

                                                        gtgAGCCCGGTGGTCGGCGTCCGGTTGGTGTTTAACACCCCGGGGGTGAACTGGGGGACCACCGCCGGATCCTCCCCCTGGTGGCAAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTc                                                                                <  2:1686003/140‑1 (MQ=255)

                                                         tgAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTcc                                                                               >  1:1336341/1‑140 (MQ=255)

                                                          gAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGG‑GCGCCAACTcccg                                                                             >  1:862536/1‑138 (MQ=255)

                                                             tCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAgcg                                                                           >  1:495329/1‑140 (MQ=255)

                                                               cGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGGGGGTTCACCCCCGGAATCCCCCCCTGCTGGCAAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgca                                                                         <  2:930016/140‑1 (MQ=255)

                                                                ggtggtCGGCGTCACTTTAGGGTTTAACCCCTCGGGGGTGAACGGGGGGATCATCGCCTGAATCCCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcac                                                                        <  2:79365/140‑1 (MQ=255)

                                                                ggtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcac                                                                        >  1:1686003/1‑140 (MQ=255)

                                                                 gtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGTACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcacg                                                                       >  2:1624724/1‑140 (MQ=255)

                                                                 gtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcacg                                                                       >  1:397079/1‑140 (MQ=255)

                                                                 gtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcacg                                                                       >  1:1764158/1‑140 (MQ=255)

                                                                 gtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcacg                                                                       >  1:639282/1‑140 (MQ=255)

                                                                 gtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcacg                                                                       >  1:10896/1‑140 (MQ=255)

                                                                 gtggtCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGcgcacg                                                                       >  1:79365/1‑140 (MQ=255)

                                                                     tCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCAtt                                                                   >  2:526444/1‑140 (MQ=255)

                                                                     tCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCAtt                                                                   >  2:1155890/1‑140 (MQ=255)

                                                                       ggCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcg                                                                 >  2:1535821/1‑140 (MQ=255)

                                                                       ggCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcg                                                                 >  2:607266/1‑140 (MQ=255)

                                                                       ggCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcg                                                                 >  1:635304/1‑140 (MQ=255)

                                                                       ggCGCCACGTTAGTGGTTACCCCCTCGGGGGTGAACTGGGGGATCATCGCCTGAACCCCCCCCTGCTGCCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcg                                                                 <  2:427085/140‑1 (MQ=255)

                                                                         cgcccggTTAGTGTTAATCCCCTCGCGGGAAAATGGCGGGATCATCCCCTGAACCCCCCCCTGCTGCCCACCCTCCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcgcg                                                               <  2:1196348/134‑1 (MQ=255)

                                                                         cGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcgcg                                                               <  1:1551733/140‑1 (MQ=255)

                                                                         cGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcgcg                                                               <  1:1542725/140‑1 (MQ=255)

                                                                         cGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCCCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTcgcg                                                               <  1:105326/140‑1 (MQ=255)

                                                                           ccACGTTAGTGTTTAACCCCTCGGGGGTGACCTGGGGGATCATCGCCTGAATCCCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGcc                                                             <  2:1336341/139‑1 (MQ=255)

                                                                            cACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCa                                                            >  1:406326/1‑140 (MQ=255)

                                                                                      gTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAgtg                                                  <  1:1606586/140‑1 (MQ=255)

                                                                                         aaCACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTg                                               >  2:1057138/1‑140 (MQ=255)

                                                                                           cacCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGcc                                             >  2:363908/1‑140 (MQ=255)

                                                                                           cacCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGcc                                             >  2:1090182/1‑140 (MQ=255)

                                                                                            cccTCGGGGGTGAACTGGGGGTCCATCGCCTGACTCCCCCCCTGCTGGCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  1:403521/139‑1 (MQ=255)

                                                                                            cccTCGGGGGTAAACGGCGGGATCATCGCCTGAACCCCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  1:1462061/139‑1 (MQ=255)

                                                                                            cccTCGCGGGTGACCGGGGGAATCACCGCCTAAACCCCCCCCTGCTGGCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  2:693103/139‑1 (MQ=255)

                                                                                            cccTCGCGGGTGAACTGCGGGATCATCGCCTGAATCCCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  2:10896/139‑1 (MQ=255)

                                                                                            cccTCGCGGGTGAACTGCGGGATCACCGCCTGAATCCCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  2:1128025/139‑1 (MQ=255)

                                                                                            acCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  1:1155890/140‑1 (MQ=255)

                                                                                            acCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  1:1057138/140‑1 (MQ=255)

                                                                                             ccTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCAt                                           >  1:1462877/1‑140 (MQ=255)

                                                                                             ccTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCAt                                           >  1:964776/1‑140 (MQ=255)

                                                                                             ccTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCAt                                           >  1:258264/1‑140 (MQ=255)

                                                                                              cTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAgtg                                                  <  2:1014445/132‑1 (MQ=255)

                                                                                              cTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAgtg                                                  >  1:1014445/1‑132 (MQ=255)

                                                                                              cTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATg                                          <  1:526444/140‑1 (MQ=255)

                                                                                              cTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATg                                          >  1:1128025/1‑140 (MQ=255)

                                                                                               tCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATgg                                         >  2:1573579/1‑140 (MQ=255)

                                                                                                cgcgGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGa                                        >  1:327818/1‑140 (MQ=255)

                                                                                                cgcgGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGa                                        >  2:1073577/1‑140 (MQ=255)

                                                                                                cgcgGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGa                                        >  2:326568/1‑140 (MQ=255)

                                                                                                  ggggTGAACTGGGGGCTCATCGCCTGACTCCCCCCCTGCTGCCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGTGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGAcc                                      <  2:1813905/139‑1 (MQ=255)

                                                                                                  ggggTAAACGGGGGGATCACCCCTTGAACCCCCCCCTGCTGGCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGAcc                                      <  2:639282/139‑1 (MQ=255)

                                                                                                   gggTGACCTGGGGGATCACCGCCTGAATCCCCCCCTGCGGGCAAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCa                                     <  2:545545/140‑1 (MQ=255)

                                                                                                       gaccTGCGGGATCATCGCCTGAATCTCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAg                                 <  1:1217937/137‑1 (MQ=255)

                                                                                                       gAACGGCGGGATCATCGCCTGAATCCCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAg                                 <  2:1764158/140‑1 (MQ=255)

                                                                                                        aacggggggATCATCGCCTAAATCCCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGa                                <  2:426607/134‑1 (MQ=255)

                                                                                                        aaCTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            <  2:1453813/128‑1 (MQ=255)

                                                                                                        aaCTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCa                                            >  1:1453813/1‑128 (MQ=255)

                                                                                                          cTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGAtt                              >  2:646083/1‑140 (MQ=255)

                                                                                                          cTGCGGGATCATCGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGAtt                              <  2:964776/140‑1 (MQ=255)

                                                                                                               ggATCACCGCCTAAATCCCCCCCTGCGGGCAAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCa                         <  1:1282817/140‑1 (MQ=255)

                                                                                                                  tcatcGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAAc                      >  1:466149/1‑140 (MQ=255)

                                                                                                                    tccGCCTGAATCTCCCCCTGCTGGCAAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCa                    <  2:1266008/138‑1 (MQ=255)

                                                                                                                    atcGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCa                    <  1:1624724/140‑1 (MQ=255)

                                                                                                                      cGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACg                  <  1:326568/140‑1 (MQ=255)

                                                                                                                      cGCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACg                  <  1:1090182/140‑1 (MQ=255)

                                                                                                                      cGCCTGAATCCCCCCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACg                  <  2:1201006/140‑1 (MQ=255)

                                                                                                                      cGCCTGAACCCCCCCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACg                  <  2:1552108/140‑1 (MQ=255)

                                                                                                                       gCCTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGc                 >  1:1552108/1‑140 (MQ=255)

                                                                                                                        ccTGAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCa                <  2:397079/140‑1 (MQ=255)

                                                                                                                        ccTGAATCCCCCCCTGCTGCCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCa                <  2:258264/140‑1 (MQ=255)

                                                                                                                           gAATCTCACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCg             >  1:673371/1‑140 (MQ=255)

                                                                                                                           gAATCTCACCCTGCTGGCCAATCACCACCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCg             <  1:391861/140‑1 (MQ=255)

                                                                                                                                 cACCCTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGgag       <  1:1073577/140‑1 (MQ=255)

                                                                                                                                   cccTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGAt     >  1:1345742/1‑140 (MQ=255)

                                                                                                                                   cccTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGAt     >  1:876665/1‑140 (MQ=255)

                                                                                                                                   cccTGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGAt     >  2:1002678/1‑140 (MQ=255)

                                                                                                                                   cccTGCTGGCCAACCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGAt     <  2:325086/140‑1 (MQ=255)

                                                                                                                                      tGCTGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGt  <  2:957405/140‑1 (MQ=255)

AACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCGGGCCAATCACCGCCGTAATGCCGTTGTTGGTGCTGCGCAACAGTGGGCGCGCCAGCTCCAGCGCACGCATTCGCGCCATCTGGAAGTGTTGCCATGGACCAATAGATTTACCAAACCACGCATCGTTGGAGATAGT  >  NC_000913/689384‑689657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`