BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,595,421	C→A	A20A (GCG→GCT)	livM ←	branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,595,421	0	C	A	100.0%	359.2 / NA	101	A20A (GCG→GCT)	livM	branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (50/51); total (50/51)

Only 100 of 106 total aligned reads displayed.

TGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCCGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGAC  >  NC_000913/3595284‑3595557

ggaaaaGCCGGCCGCAAAAGCTGAAAAAAAAAGCCCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGAcgccagc                                                                                                                                        <  2:310862/137‑1 (MQ=255)

 ggAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGAcgccagcc                                                                                                                                       >  2:1806110/1‑140 (MQ=255)

  gAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACgccagcca                                                                                                                                      <  2:693015/140‑1 (MQ=255)

   aaaGCCGGTCGCAAAAGCTGGAAGAAAAAGCCCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGccagccag                                                                                                                                     <  2:1714237/140‑1 (MQ=255)

     aGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGca                                                                                                                                   >  1:93681/1‑140 (MQ=255)

      gCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGcac                                                                                                                                  >  1:1744630/1‑140 (MQ=255)

       ccagTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGcaca                                                                                                                                 >  2:30822/4‑140 (MQ=255)

       ccGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGcaca                                                                                                                                 >  1:788719/1‑140 (MQ=255)

       ccGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGcaca                                                                                                                                 >  2:433133/1‑140 (MQ=255)

        cGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACaa                                                                                                                                >  1:179962/1‑140 (MQ=255)

          gTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAg                                                                                                                              >  2:1001120/1‑140 (MQ=255)

            cGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGaa                                                                                                                            <  2:3306/140‑1 (MQ=255)

               aaaaGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACAt                                                                                                                         <  2:1448351/140‑1 (MQ=255)

                     tGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGc                                                                                                                   >  2:1015356/1‑140 (MQ=255)

                     tGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGc                                                                                                                   >  1:1091154/1‑140 (MQ=255)

                      ggAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCa                                                                                                                  <  1:1723132/140‑1 (MQ=255)

                      ggAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCa                                                                                                                  <  2:1523246/140‑1 (MQ=255)

                      ggAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCa                                                                                                                  <  2:243769/140‑1 (MQ=255)

                         agaaAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCagag                                                                                                               <  2:93681/140‑1 (MQ=255)

                           aaaaaGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCagagag                                                                                                             <  2:1602107/140‑1 (MQ=255)

                           aaaaaGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCagagag                                                                                                             <  2:448561/140‑1 (MQ=255)

                             aaaGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagca                                                                                                           >  1:921846/1‑140 (MQ=255)

                              aaGCCCCCCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagcag                                                                                                          <  2:1126901/140‑1 (MQ=255)

                              aaGCCCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagcag                                                                                                          <  1:294377/140‑1 (MQ=255)

                              aaGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagcag                                                                                                          <  2:575748/140‑1 (MQ=255)

                              aaGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagcag                                                                                                          <  1:977831/140‑1 (MQ=255)

                              aaGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagcag                                                                                                          <  1:1015356/140‑1 (MQ=255)

                               aGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGagcagc                                                                                                         >  1:1822214/1‑140 (MQ=255)

                                gccccccgccgTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAgcg                                                                                                        <  2:1413010/135‑1 (MQ=255)

                                   caccGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCa                                                                                                     <  1:433133/140‑1 (MQ=255)

                                   caccGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCa                                                                                                     <  2:589434/140‑1 (MQ=255)

                                   caccGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCa                                                                                                     <  2:1822214/140‑1 (MQ=255)

                                     ccgccgTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCAtt                                                                                                   >  1:1776892/1‑140 (MQ=255)

                                           tGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAata                                                                                             >  2:1171761/1‑140 (MQ=255)

                                             ccGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCagagag                                                                                                             >  1:980480/1‑122 (MQ=255)

                                                 tAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATc                                                                                       <  2:1478419/140‑1 (MQ=255)

                                                      acCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGttt                                                                                  <  2:179962/140‑1 (MQ=255)

                                                      acCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGttt                                                                                  <  1:762761/140‑1 (MQ=255)

                                                        ccACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCa                                                                                >  2:1506961/1‑140 (MQ=255)

                                                          aCTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATa                                                                              >  1:787356/1‑140 (MQ=255)

                                                          aCTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATa                                                                              >  2:1287519/1‑140 (MQ=255)

                                                          aCTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATa                                                                              >  2:1537606/1‑140 (MQ=255)

                                                          aCTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATa                                                                              >  1:265686/1‑140 (MQ=255)

                                                            tGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCAt                                                                                        >  2:543253/1‑128 (MQ=255)

                                                            tGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCAt                                                                                        <  1:543253/128‑1 (MQ=255)

                                                            tGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACt                                                                            <  1:731756/140‑1 (MQ=255)

                                                                  cGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTctct                                                                      >  2:482468/1‑140 (MQ=255)

                                                                      cATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCt                                                                  >  2:339858/1‑140 (MQ=255)

                                                                        tCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTcc                                                                >  2:929887/1‑140 (MQ=255)

                                                                         ccGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACt                                                                            >  2:1675274/1‑127 (MQ=255)

                                                                         ccGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACt                                                                            <  1:1675274/127‑1 (MQ=255)

                                                                           gAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCggg                                                             <  2:921846/140‑1 (MQ=255)

                                                                           gAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCggg                                                             <  1:1806110/140‑1 (MQ=255)

                                                                           gAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCggg                                                             <  2:787356/140‑1 (MQ=255)

                                                                             aGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGTGCg                                                           >  2:577314/1‑140 (MQ=255)

                                                                             aGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           <  2:788719/140‑1 (MQ=255)

                                                                             aGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           >  2:1029308/1‑140 (MQ=255)

                                                                             aGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           <  1:339858/140‑1 (MQ=255)

                                                                             aGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           <  1:416264/140‑1 (MQ=255)

                                                                                cGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGAcc                                                        <  1:1029308/140‑1 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           >  1:294856/1‑134 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           <  2:294856/134‑1 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAg                                                     >  1:31515/1‑140 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAg                                                     >  2:1135960/1‑140 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAg                                                     >  1:508461/1‑140 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAg                                                     >  2:255431/1‑140 (MQ=255)

                                                                                   gtCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAg                                                     >  1:730195/1‑140 (MQ=255)

                                                                                    tCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGa                                                    >  1:1187007/1‑140 (MQ=255)

                                                                                     cGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGaa                                                   <  1:367564/140‑1 (MQ=255)

                                                                                      gACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAAt                                                  >  2:1473362/1‑140 (MQ=255)

                                                                                         caccaGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           >  2:559495/1‑128 (MQ=255)

                                                                                         caccaGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCg                                                           <  1:559495/128‑1 (MQ=255)

                                                                                         caccaGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATAcc                                               >  1:163607/1‑140 (MQ=255)

                                                                                           ccaGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCgg                                             <  1:955443/140‑1 (MQ=255)

                                                                                            caGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGt                                            <  2:1187007/140‑1 (MQ=255)

                                                                                              gTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCg                                          <  1:255431/140‑1 (MQ=255)

                                                                                                ttGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGc                                        <  1:1506961/140‑1 (MQ=255)

                                                                                                 tGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCa                                       <  2:31515/140‑1 (MQ=255)

                                                                                                      ccATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCAcc                                  >  1:81061/1‑140 (MQ=255)

                                                                                                      ccATCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCAcc                                  >  1:1625249/1‑140 (MQ=255)

                                                                                                        aTCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcag                                <  1:798365/140‑1 (MQ=255)

                                                                                                         tCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcagc                               >  1:1797764/1‑140 (MQ=255)

                                                                                                         tCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcag                                >  2:558740/1‑139 (MQ=255)

                                                                                                         tCCAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcag                                <  1:558740/139‑1 (MQ=255)

                                                                                                          ccAGCTCCAGTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcagca                              >  1:49288/1‑140 (MQ=255)

                                                                                                                   gTTGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGaa                     >  2:1346851/1‑140 (MQ=255)

                                                                                                                    ttGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATGCTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAAt                    <  2:1776892/140‑1 (MQ=255)

                                                                                                                    ttGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAAt                    <  2:244652/140‑1 (MQ=255)

                                                                                                                    ttGCACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAAt                    >  2:631187/1‑140 (MQ=255)

                                                                                                                       cACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATcag                 <  2:730195/140‑1 (MQ=255)

                                                                                                                       cACGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATcag                 <  1:1537606/140‑1 (MQ=255)

                                                                                                                        aCGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcagc                               >  2:259498/1‑125 (MQ=255)

                                                                                                                        aCGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACcagc                               <  1:259498/125‑1 (MQ=255)

                                                                                                                         cGCCCATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATcagca               >  1:856375/1‑140 (MQ=255)

                                                                                                                           cccATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAgg             <  1:482468/140‑1 (MQ=255)

                                                                                                                           cccATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAgg             <  1:1473362/140‑1 (MQ=255)

                                                                                                                            ccATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAggg            <  2:81061/140‑1 (MQ=255)

                                                                                                                             cATAAAGACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGACATCACCAGCAGCACCAGAATCAGCAGGGc           >  1:630542/1‑140 (MQ=255)

                                                                                                                                   gACGCCAGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATga     <  2:1056871/140‑1 (MQ=255)

                                                                                                                                      gccagccaGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGAc  >  2:916611/1‑140 (MQ=255)

TGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCGTGTCGACCACCAGTTTGGTGCCATCCAGCTCCAGTTGCACGCCCATAAAGACGCCCGCCAGCACAAAGAACATCGCGGCAGAGAGCAGCGCCATTGCAATATGCATCGGTTTCATACTTTCTCTACCTCCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGAC  >  NC_000913/3595284‑3595557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`