Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4350CT34.4% 106.7 / 62.1 90intergenic (‑179/‑28)ttdR/ttdADNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (5/54);  new base T (31/0);  total (36/54)
Fisher's exact test for biased strand distribution p-value = 2.89e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 112 total aligned reads displayed.

GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA  >  NC_000913/3206296‑3206574
                                                                                                                                             |                                                                                                                                              
gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTc                                                                                                                                                <  2:1403639/140‑1 (MQ=255)
  aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCa                                                                                                                                              >  2:319398/1‑140 (MQ=255)
  aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCa                                                                                                                                              <  2:36750/140‑1 (MQ=255)
    aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGa                                                                                                                                            >  1:2509632/1‑140 (MQ=255)
    aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGa                                                                                                                                            >  1:2629667/1‑140 (MQ=255)
    aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGa                                                                                                                                            >  1:1873691/1‑140 (MQ=255)
    aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCaaa                                                                                                                                            >  1:2496810/1‑138 (MQ=255)
         tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCCGACaaaa                                                                                                                                       >  2:185948/1‑139 (MQ=255)
           ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATAc                                                                                                                                     <  2:510942/140‑1 (MQ=255)
           ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATAc                                                                                                                                     <  2:1350123/140‑1 (MQ=255)
           ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATAc                                                                                                                                     <  2:1385063/140‑1 (MQ=255)
                   tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATg                                                                                                                             >  2:2225423/1‑140 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTTATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                         <  1:2539924/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAATTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                         <  1:2021518/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                         <  1:2530255/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                         <  1:185948/140‑1 (MQ=255)
                        tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGA‑ggt                                                                                                                       >  2:831933/1‑138 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTTATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAAACAAAAAAAAAAAATGGA‑GGTgg                                                                                                                     >  2:2539924/1‑139 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGAATTTTTCC‑TACAAAAAAAAAAAATgggggttg                                                                                                                      >  2:1944795/1‑134 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCAAACAAAAAAAAAAAATGGA‑GTTGc                                                                                                                     >  2:1210873/1‑140 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCCGACAAAAAAAAAAAATGGA‑GTTGc                                                                                                                     >  1:56230/1‑140 (MQ=255)
                           cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGTGGAATTTTTTC‑GACAAAAACAAAAAATGGA‑ggttgc                                                                                                                    >  2:2804020/1‑135 (MQ=255)
                              aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCatg                                                                                                                 <  1:2424274/140‑1 (MQ=255)
                               atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAAAGGA‑GGTGGCatga                                                                                                                >  2:2424274/1‑140 (MQ=255)
                               atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTTAGACAAAAACAAAAAAAGGA‑GGTGGCatga                                                                                                                >  2:2706932/1‑140 (MQ=255)
                                    cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTTAGACAAAAAAAAAAAATGGG‑GGTGCCATGGTGAgg                                                                                                           >  2:1900011/1‑139 (MQ=255)
                                    cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCCGACAAAAACAAAAAAAAGA‑GGTGCCATGATGAgg                                                                                                           >  1:449339/1‑139 (MQ=255)
                                     attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑g                                                                                                         <  1:831933/140‑1 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAAATGA‑GGTGGCATGATGAGC‑Ga                                                                                                        >  2:1680469/1‑140 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Ga                                                                                                        <  2:2509632/140‑1 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Ga                                                                                                        <  1:1900011/140‑1 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Ga                                                                                                        <  1:1700369/140‑1 (MQ=255)
                                        cTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATGATGAggggaa                                                                                                       >  2:65678/1‑135 (MQ=255)
                                          tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCCGACAAAAAAAAAAAATTGA‑GGTGGCATGATGAGC‑Gaaaaa                                                                                                    >  1:2412085/1‑138 (MQ=255)
                                             tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGtaat                                                                                                 <  2:2629667/140‑1 (MQ=255)
                                               tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGtaataa                                                                                               <  2:250446/140‑1 (MQ=255)
                                                 gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATTATGAGC‑GGAAGgaaaaaaa                                                                                             >  2:1533050/1‑138 (MQ=255)
                                                   gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCaa                                                                                           <  2:1419747/140‑1 (MQ=255)
                                                   gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCaa                                                                                           <  1:1297146/140‑1 (MQ=255)
                                                    ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAAc                                                                                          <  1:2658423/140‑1 (MQ=255)
                                                    ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAAc                                                                                          <  1:2614039/140‑1 (MQ=255)
                                                    ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAAAACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAAc                                                                                          <  2:1873691/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAgg                                                                                       <  1:386486/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAgg                                                                                       <  2:2625452/140‑1 (MQ=255)
                                                        ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCATACAAAAAAAAAAAATGGA‑GGTTGCATGATGAGC‑GAAAAGAATAAACaaaaagc                                                                                      >  2:1297146/1‑135 (MQ=255)
                                                        ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGc                                                                                      <  1:2804020/140‑1 (MQ=255)
                                                        ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGc                                                                                      <  1:1210873/140‑1 (MQ=255)
                                                        cagaCGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGc                                                                                      <  1:1372137/137‑1 (MQ=255)
                                                         gagacagcTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCa                                                                                     <  1:2366767/133‑1 (MQ=255)
                                                              acaggTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGaa                                                                                <  1:2012592/136‑1 (MQ=255)
                                                              aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGaa                                                                                <  1:1533050/140‑1 (MQ=255)
                                                               aCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATGATGAGC‑GAAAGTAATAAAGAACAAGCCGTGAAt                                                                               >  1:1115175/1‑140 (MQ=255)
                                                                   ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAATAAAAAAAATGGA‑GTTGCCATGATGAGC‑GAAAGGAATAAACAACAGGCAGTGAATAAGt                                                                           >  1:477877/1‑140 (MQ=255)
                                                                      aTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCACACAAAAACAAAAAAAGGG‑GGTGCCCTGATGAGC‑GAAAAAAAAAAAAAACAAGCAGGGAATaaaactg                                                                        >  2:1372137/1‑135 (MQ=255)
                                                                         aCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACag                                                                     <  1:2410141/140‑1 (MQ=255)
                                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCCAACAAATAAAAAAAATGGA‑GTTGGCATGATGAGC‑GGAAGAAATAAACAACAAGCAGGGAAAAAATTTAAAgagaa                                                                 >  2:1919700/1‑139 (MQ=255)
                                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGCCATGATGAGG‑GAAAAAAAAAAACAACAGGCAGAGAATAAAATGACAGAGAt                                                                 >  2:2894020/1‑140 (MQ=255)
                                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTTACAAAAAAAAAAAAAATGGA‑GGTGGCATGATGAGC‑GGAAGGAAAAAAAAAAAAGCAGGGAAAAAAATGACAgagaa                                                                 >  2:2602832/1‑139 (MQ=255)
                                                                                  cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAGACAAAAAAAAAAAATGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAAAAACAAGCAGTGAATAAGATGACAGAGATTG‑ttg                                                           >  2:2230015/1‑138 (MQ=255)
                                                                                     tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAAAGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAACAAAAAGCAGTGAAAAAGTTGACAGAGATTG‑TCGCTa                                                        >  2:104449/1‑140 (MQ=255)
                                                                                     tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCAGACAAAAAAAAAAAATGGA‑GTTGGCATGATGAGC‑GAAAAGAATAAAAAAAAAGCAGGGAAAAAAATGAAAAAGAATG‑TCGCTa                                                        >  2:2426494/1‑140 (MQ=255)
                                                                                       gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCACACAAAAAAAAAAAATGGA‑GTTGCCCTGATGAGG‑GAAAAGAATAAAAAAAAAGCAGTGAAAAAAATGAAAGAGATTT‑TTGCTaaa                                                      >  2:2957558/1‑139 (MQ=255)
                                                                                        cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑GAATTTTTCC‑GACAAAAAAAAAAAATTGA‑GGTTCCATGATTAGCGGAAAGAAAAAAAAAAAAGG‑AGGGAAAAAATTTAAAAAGATTG‑TTGCTTACt                                                     >  2:784979/1‑140 (MQ=255)
                                                                                        cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCAAACAAAAAAAAAAAAATGA‑GGTGGCATGATGGGG‑GGAAAAAAAAAAAAAAAAGCAGGGAATAAATTGAAAAAGAATT‑TTGGTAACt                                                     >  2:1417066/1‑140 (MQ=255)
                                                                                        cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGA‑GGTGCCATGATTAGC‑GGAAATAATAAACAAAAAGCAGGGAATAAATTGAAAGAGAATG‑TTGCttaat                                                     >  2:598641/1‑136 (MQ=255)
                                                                                           aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑AAATTTTTCCAAAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTG‑TCGCTAACTTTa                                                  <  2:3166198/140‑1 (MQ=255)
                                                                                             aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGG‑GGTGCCATGATGAGC‑GAAAGAAAAAAGAAACAAGCAGTGGATAAATTGAAAAAGATTG‑TCGCTAAATTTatc                                                >  2:1859485/1‑138 (MQ=255)
                                                                                                  aaaaCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCAt                                           <  1:598641/140‑1 (MQ=255)
                                                                                                  aaaaCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCAt                                           <  1:1944795/140‑1 (MQ=255)
                                                                                                   aaaCCACATTTTTAGTGGTAGTTTGGGGG‑GGT‑GAATTTTCCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGAAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTG‑TCGCTACCTTTACCGCCATg                                          <  2:3064520/140‑1 (MQ=255)
                                                                                                     aCCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGAt                                        <  1:832528/140‑1 (MQ=255)
                                                                                                         caTTTTTAGTGGTAGTTTGTGGC‑GGT‑GGATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATGATGAGG‑GGAAGGAAAAAACAAAAAGGAGTGAAAAAAATGACAGAGAATT‑TTGCTAAATTTTCCGCCATGAttttt                                    >  2:419741/1‑138 (MQ=255)
                                                                                                         caTTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAGACAAAAAAAAAAAAAGGG‑GGTGGCCTTATGAGC‑GGAAGAAATAAACAAAAAGCAAGGAATAAATTGGAAGAGAATG‑TCGCTAACTTTACCGCCCAGATTTCt                                    >  2:946812/1‑140 (MQ=255)
                                                                                                              ttAGTGGTAGTTTGTGGG‑GGT‑AAATTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTAccag                               <  2:2566042/140‑3 (MQ=255)
                                                                                                               tAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGa                              <  1:65678/140‑1 (MQ=255)
                                                                                                                aGTGGTATTTTGTGGC‑GGT‑GATTTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGaa                             <  2:2496810/140‑1 (MQ=255)
                                                                                                                aGTGGTAGTTTGTGGC‑GGT‑GAAATTTTTCCGACAAAAACAAAAAATGGA‑GTTGGCCTGATGAGG‑GGAAAAAATAAACAACAAGGAGAGAAAAAGATTGCAGAGAGTG‑TCACTAAATTTTACCCCCTGATTTTTTccccca                             >  2:351618/1‑137 (MQ=255)
                                                                                                                aGTGGTAGTTTGTGGC‑GGT‑AATTTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑AAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGaa                             <  2:925740/140‑1 (MQ=255)
                                                                                                                 gTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTCCTACCCGAAt                            <  2:307281/140‑1 (MQ=255)
                                                                                                                  tGGTAGTTTGTGGC‑GGT‑GAATTTTTTCAAACAAAAACAAAAAATGGAGGTTGCC‑TGATGAGG‑GGAAAAAAAAAACAAAAGGCAGTGAAAAAATTTACAGAGATTG‑TTGCTAAATTTTCCCCCCTGATTTTTTCCCCAATg                           >  2:2861017/1‑140 (MQ=255)
                                                                                                                    gTAGTTTGTGGC‑GGT‑GAATTTTTTCAAACAAAAAAAAAAAATGGG‑GGTGCCCTGGTGAGG‑GGAAGTAATAAGGAAAAAGCAGGGAAAAAAATGGCAGAGATTG‑TCGCTAACTTTTACCCCACTATTTTTACCCGAATGcc                         >  2:670801/1‑140 (MQ=255)
                                                                                                                      aGTTTGTGGC‑GGT‑GAATTTTTTCCCACAAAAAAAAAAAAAGGG‑GTTGGCCCGATGAGG‑GGAAGGAATAAACAAAAAGGAGAGAAAAAATTGACAGAGAATGTTGGTTAATTTTACC‑CCATAATTTTTTCCCCAATTCCtg                       >  2:1695044/1‑140 (MQ=255)
                                                                                                                      aGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtg                       <  1:1913459/140‑1 (MQ=255)
                                                                                                                       gTTTGTGGC‑GGT‑GAATTTTTTCCGACAAAAAAAAAAAATGGG‑GGTGGCATGGTGAGG‑GAAAAAAAAAAAAAAAAAGCAGTGAAAAAATTGACAGAGATTG‑TTGCTTACTTTTCCCCCCTGATTTCTACCCGAAAGCCtga                      >  2:1411655/1‑140 (MQ=255)
                                                                                                                        tttGTGGC‑GGT‑GAATTTTTTCAGACAAAAACAAAAAATGGA‑GGTGGCATGATGAGG‑GAAAGGAATAAAAAACAAGCAGTGAATAAATTGACAGAGAATG‑TCGCTAACTTTACCCCCCTGATTTTTACCCCAATGCCtgat                     >  2:1066770/1‑140 (MQ=255)
                                                                                                                         ttGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  1:1859485/140‑1 (MQ=255)
                                                                                                                         ttGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTAACGCCATGATTTCTACCCGAATGCCtgatg                    <  1:1919700/140‑1 (MQ=255)
                                                                                                                         ttGTGGC‑GGT‑GAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  1:2894020/140‑1 (MQ=255)
                                                                                                                         ttGTGGC‑GGT‑AAATTTTTCAAAAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGG‑AAAAGTAATAACCAACAGGCAGTAAAAAAGTTAACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  2:449339/140‑1 (MQ=255)
                                                                                                                              gC‑GGT‑GATTTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg               <  1:104449/140‑1 (MQ=255)
                                                                                                                                  gT‑GAATTTTTTCAGACAAAAACAAAAAATGGA‑GGTGGCATGATGGGG‑GAAAGTAATAAACAACAAGGAGTGAATAAAATGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTTTACCCGAAAGGCTGATGACgtgggg            >  2:2985400/1‑138 (MQ=255)
                                                                                                                                     gAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:2548269/140‑1 (MQ=255)
                                                                                                                                     gAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:1680469/140‑1 (MQ=255)
                                                                                                                                     gAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:149647/140‑1 (MQ=255)
                                                                                                                                     gAATTTTTCAAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  2:1115175/140‑1 (MQ=255)
                                                                                                                                     aaaTTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:2519137/139‑1 (MQ=255)
                                                                                                                                            tCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTa   >  1:1819734/1‑140 (MQ=255)
                                                                                                                                             ccAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa  <  1:2230015/140‑1 (MQ=255)
                                                                                                                                             ccAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa  >  1:228792/1‑140 (MQ=255)
                                                                                                                                             ccAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa  <  2:2412085/140‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGC‑GGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTG‑TCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA  >  NC_000913/3206296‑3206574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑