BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	7,928	A→T	V11D (GTC→GAC)	yaaJ ←	putative transporter YaaJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	7,928	0	A	T	100.0%	612.6 / NA	176	V11D (GTC→GAC)	yaaJ	putative transporter YaaJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (81/95); total (81/95)

Only 100 of 178 total aligned reads displayed.

CGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCGTAGCAT  >  NC_000913/7791‑8064

cGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCg                                                                                                                                        <  1:2556918/140‑1 (MQ=255)

  ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCt                                                                                                                                      <  2:1043765/140‑1 (MQ=255)

  ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCt                                                                                                                                      <  2:1542429/140‑1 (MQ=255)

  ccTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCt                                                                                                                                      <  2:1126871/140‑1 (MQ=255)

   cTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTg                                                                                                                                     >  1:573251/1‑140 (MQ=255)

   cTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTg                                                                                                                                     >  2:1715781/1‑140 (MQ=255)

      gCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTa                                                                                                                                  >  1:1571635/1‑140 (MQ=255)

          tgGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCg                                                                                                                                        >  2:1662002/1‑130 (MQ=255)

          tgGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGa                                                                                                                              <  2:573251/140‑1 (MQ=255)

            gATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAg                                                                                                                            >  2:2643326/1‑140 (MQ=255)

                aaTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGgaga                                                                                                                        >  1:1360272/1‑140 (MQ=255)

                 aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGaa                                                                                                                       >  2:64764/1‑140 (MQ=255)

                 aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGaa                                                                                                                       >  1:2444846/1‑140 (MQ=255)

                 aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGaa                                                                                                                       >  2:3001026/1‑140 (MQ=255)

                 aTGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGAACCCCAAAGGTCGCTGTTAATGAAGGAGaa                                                                                                                       >  2:2856929/1‑140 (MQ=255)

                    cTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGaaaaa                                                                                                                    >  2:3063716/1‑140 (MQ=255)

                      aTTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAAt                                                                                                                  >  2:872523/1‑140 (MQ=255)

                       tttttAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGaaaaaa                                                                                                                   >  1:1955969/1‑138 (MQ=255)

                         tttAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTg                                                                                                               <  1:2987942/140‑1 (MQ=255)

                         tttAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTg                                                                                                               <  2:1789826/140‑1 (MQ=255)

                          ttAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTgg                                                                                                              <  1:2643326/140‑1 (MQ=255)

                           tAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGTACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                             <  1:2190923/140‑1 (MQ=255)

                           tAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                             <  1:2245395/140‑1 (MQ=255)

                            aaGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgca                                                                                                            >  2:38854/1‑140 (MQ=255)

                            aaGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgca                                                                                                            >  1:1653321/1‑140 (MQ=255)

                             aGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgcat                                                                                                           <  1:1852383/140‑1 (MQ=255)

                                cTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                                        <  1:3063716/140‑1 (MQ=255)

                                cTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                                        <  1:64764/140‑1 (MQ=255)

                                 ttttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgcatgcat                                                                                                       >  1:617966/1‑140 (MQ=255)

                                 ttttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                                        <  2:2704944/139‑1 (MQ=255)

                                 ttttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgcatgca                                                                                                        >  1:2704944/1‑139 (MQ=255)

                                  tttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCata                                                                                                      >  2:506898/1‑140 (MQ=255)

                                   ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGgc                                                                                                             <  2:631871/132‑1 (MQ=255)

                                   ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCatat                                                                                                     >  1:1883259/1‑140 (MQ=255)

                                   ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCatat                                                                                                     >  1:835498/1‑140 (MQ=255)

                                   ttGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCatat                                                                                                     >  1:78147/1‑140 (MQ=255)

                                    tGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATc                                                                                                    <  1:1470006/140‑1 (MQ=255)

                                     gCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATcc                                                                                                   <  1:2205942/140‑1 (MQ=255)

                                      ccAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATccc                                                                                                  <  2:413192/140‑1 (MQ=255)

                                      ccAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATccc                                                                                                  <  1:1246716/140‑1 (MQ=255)

                                                     tAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTcg                                                                                   >  2:2957782/1‑140 (MQ=255)

                                                      aGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTcgc                                                                                  <  2:2444846/140‑1 (MQ=255)

                                                        cGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGa                                                                                >  2:360422/1‑140 (MQ=255)

                                                           aaCTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGa                                                                             <  2:78147/140‑1 (MQ=255)

                                                            aCTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGAc                                                                            >  2:53917/1‑140 (MQ=255)

                                                              tGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACtt                                                                          <  2:1233887/140‑1 (MQ=255)

                                                               gCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACttt                                                                         <  2:1653321/140‑1 (MQ=255)

                                                                cacaAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                                        <  2:812787/140‑1 (MQ=255)

                                                                cacaAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                                        >  1:1313032/1‑140 (MQ=255)

                                                                cacaAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTc                                                                        >  1:2819565/1‑140 (MQ=255)

                                                                 acaAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTcc                                                                       >  2:1418655/1‑140 (MQ=255)

                                                                        cGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTaa                                                                >  2:2491808/1‑140 (MQ=255)

                                                                          gTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAAc                                                              >  2:1116544/1‑140 (MQ=255)

                                                                               aaaaGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTAc                                                         >  2:2001694/1‑140 (MQ=255)

                                                                               aaaaGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTAc                                                         >  2:1725623/1‑140 (MQ=255)

                                                                                   gTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAAt                                                     <  1:1550195/140‑1 (MQ=255)

                                                                                   gTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAAt                                                     <  1:661116/140‑1 (MQ=255)

                                                                                     gAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTg                                                   >  1:2479430/1‑140 (MQ=255)

                                                                                      aaCCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGt                                                  <  2:1313032/140‑1 (MQ=255)

                                                                                        ccAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGttt                                                <  2:1619747/140‑1 (MQ=255)

                                                                                        ccAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTT‑CCAATTGTTTa                                               <  1:2499851/140‑1 (MQ=255)

                                                                                           acaacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaag                                             <  1:1725623/140‑1 (MQ=255)

                                                                                           acaacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaag                                             <  2:168682/140‑1 (MQ=255)

                                                                                            caacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGttt                                                >  2:2088841/1‑136 (MQ=255)

                                                                                            caacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                                            >  1:474716/1‑140 (MQ=255)

                                                                                            caacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                                            <  2:2598827/140‑1 (MQ=255)

                                                                                            caacCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTaaga                                            <  2:2819565/140‑1 (MQ=255)

                                                                                                  gcgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGtata                                      >  2:3128505/1‑140 (MQ=255)

                                                                                                   cgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCa                                                       >  2:462685/1‑122 (MQ=255)

                                                                                                   cgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCa                                                       <  1:462685/122‑1 (MQ=255)

                                                                                                   cgcCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGtatat                                     >  2:1267719/1‑140 (MQ=255)

                                                                                                       gAAGAGCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGc                                 <  2:130027/140‑1 (MQ=255)

                                                                                                         agagCAGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTa                               <  1:243689/140‑1 (MQ=255)

                                                                                                              aGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAgg                          <  2:2663643/140‑1 (MQ=255)

                                                                                                              aGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAgg                          <  2:2972838/140‑1 (MQ=255)

                                                                                                              aGGTAAATCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAgg                          <  1:1618051/140‑1 (MQ=255)

                                                                                                                  aaaTCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAgg                          >  2:592074/1‑136 (MQ=255)

                                                                                                                     tCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGa                   >  1:2600568/1‑140 (MQ=255)

                                                                                                                     tCATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGa                   >  1:1900692/1‑140 (MQ=255)

                                                                                                                      cATTACCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGAt                  <  1:3172305/140‑1 (MQ=255)

                                                                                                                          aCCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACt              >  2:497849/1‑140 (MQ=255)

                                                                                                                          aCCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACt              >  1:188293/1‑140 (MQ=255)

                                                                                                                          aCCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACt              >  2:2182183/1‑140 (MQ=255)

                                                                                                                          aCCGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTCAAGAAGTATATACGCTACGAGGTACTTGAt                  <  1:1661355/136‑1 (MQ=255)

                                                                                                                           ccGATCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACtt             <  1:1267719/140‑1 (MQ=255)

                                                                                                                              aTCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTg          >  1:1003428/1‑140 (MQ=255)

                                                                                                                              aTCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTg          <  1:38854/140‑1 (MQ=255)

                                                                                                                              aTCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTg          <  2:222153/140‑1 (MQ=255)

                                                                                                                              aTCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTg          <  2:1900692/140‑1 (MQ=255)

                                                                                                                              aTCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTg          <  1:3043380/140‑1 (MQ=255)

                                                                                                                              aTCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTg          >  1:2978165/1‑140 (MQ=255)

                                                                                                                               tCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGAt                  <  2:1856096/131‑1 (MQ=255)

                                                                                                                               tCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGc         >  1:2391012/1‑140 (MQ=255)

                                                                                                                               tCCCCAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGc         >  1:2156361/1‑140 (MQ=255)

                                                                                                                                ccccAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCg        <  1:2957782/140‑1 (MQ=255)

                                                                                                                                ccccAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCg        >  1:2902329/1‑140 (MQ=255)

                                                                                                                                ccccAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCg        <  2:1571635/140‑1 (MQ=255)

                                                                                                                                ccccAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCg        <  2:2391012/140‑1 (MQ=255)

                                                                                                                                   cAAAGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCGTAg     <  1:506898/140‑1 (MQ=255)

                                                                                                                                      aGGTCGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCGTAGCAt  >  1:3006794/1‑140 (MQ=255)

CGCCTGGCTGTGGATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAACTGCACAAATCCGGTGCGAAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATGAAGGAGAAAAAATCTGGCATGCATATCCCTCTTATTGCCGGTCGCGATGACTTTCCTGTGTAAACGTTACCAATTGTTTAAGAAGTATATACGCTACGAGGTACTTGATAACTTCTGCGTAGCAT  >  NC_000913/7791‑8064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`