BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,399,751	G→T	R167M (AGG→ATG)	miaA →	tRNA dimethylallyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,399,751	0	G	T	100.0%	655.0 / NA	184	R167M (AGG→ATG)	miaA	tRNA dimethylallyltransferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (94/90); total (94/90)

Only 100 of 187 total aligned reads displayed.

CTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCA  >  NC_000913/4399615‑4399886

     gTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATTGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTccc                                                                                                                                 <  1:950836/140‑1 (MQ=255)

             aCCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTg                                                                                                                         >  1:2388568/1‑140 (MQ=255)

                       aCGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGtttttt                                                                                                               >  2:2502404/1‑140 (MQ=255)

                             cAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCAttt                                                                                                         >  2:1053183/1‑140 (MQ=255)

                             cAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCAttt                                                                                                         <  2:1167074/140‑1 (MQ=255)

                                  ttGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCATTGGAAGTTTTTTTCATTTCGGGt                                                                                                    <  1:2618721/140‑1 (MQ=255)

                                    gAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaa                                                                                                  <  1:2815760/140‑1 (MQ=255)

                                    gAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaa                                                                                                  <  1:2735392/140‑1 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTc                                                                                                        >  1:1370341/1‑133 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTc                                                                                                        <  2:1370341/133‑1 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaaa                                                                                                 >  2:1540194/1‑140 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaaa                                                                                                 >  2:107352/1‑140 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaaa                                                                                                 >  1:198347/1‑140 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaaa                                                                                                 >  1:2160267/1‑140 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaaa                                                                                                 >  2:2582088/1‑140 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaa                                                                                                  >  2:2147434/1‑139 (MQ=255)

                                     aGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTaa                                                                                                  <  1:2147434/139‑1 (MQ=255)

                                     aGCAACAGGCAGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCAtt                                                                                                          <  2:952254/131‑1 (MQ=255)

                                          cAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACttt                                                                                            >  2:2281940/1‑140 (MQ=255)

                                          cAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACttt                                                                                            >  2:1771390/1‑140 (MQ=255)

                                          cAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACttt                                                                                            >  1:685247/1‑140 (MQ=255)

                                           aGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTa                                                                                           >  2:782732/1‑140 (MQ=255)

                                           aGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTa                                                                                           >  2:534909/1‑140 (MQ=255)

                                            ggcggcAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTaa                                                                                          <  1:983663/140‑1 (MQ=255)

                                               ggcAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACgg                                                                                       >  2:2687057/1‑140 (MQ=255)

                                                       aaGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACg                                                                               <  1:2953010/140‑1 (MQ=255)

                                                              ggAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGt                                                                        >  1:1958070/1‑140 (MQ=255)

                                                              ggAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGACACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCa                                                                             >  1:147354/1‑135 (MQ=255)

                                                                aGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCa                                                                      >  2:3036282/1‑140 (MQ=255)

                                                                   cATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGga                                                                   >  1:188153/1‑140 (MQ=255)

                                                                   cATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGga                                                                   >  1:353885/1‑140 (MQ=255)

                                                                    aTTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  >  2:1965399/1‑140 (MQ=255)

                                                                    aTTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  <  2:2994000/140‑1 (MQ=255)

                                                                    aTTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  >  2:2130865/1‑140 (MQ=255)

                                                                    aTTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  >  1:2718613/1‑140 (MQ=255)

                                                                    aTTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  >  2:1409384/1‑140 (MQ=255)

                                                                    aTTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAACGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgag                                                                  >  2:854747/1‑140 (MQ=255)

                                                                     ttGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCaa                                                                            >  1:654234/1‑129 (MQ=255)

                                                                     ttGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgaga                                                                 >  2:2019597/1‑140 (MQ=255)

                                                                     ttGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGgaga                                                                 <  1:1540194/140‑1 (MQ=255)

                                                                       gCATCGTCAACTTCAGGAGGTAGATTCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCTCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACg                                                               <  1:3050856/140‑1 (MQ=255)

                                                                       gCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACg                                                               <  2:3066276/140‑1 (MQ=255)

                                                                        cATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAgg                                                                    >  1:1396710/1‑134 (MQ=255)

                                                                        cATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGc                                                              <  2:1958070/140‑1 (MQ=255)

                                                                         aTCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGct                                                             <  1:433833/140‑1 (MQ=255)

                                                                         aTCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGct                                                             <  1:2785857/140‑1 (MQ=255)

                                                                         aTCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGct                                                             <  1:1662607/140‑1 (MQ=255)

                                                                         aTCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGct                                                             <  1:3063402/140‑1 (MQ=255)

                                                                         aTCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGct                                                             <  2:218475/140‑1 (MQ=255)

                                                                          tCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCa                                                                             <  1:2424766/123‑1 (MQ=255)

                                                                          tCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCa                                                                             >  2:2424766/1‑123 (MQ=255)

                                                                          tCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctc                                                            >  2:2226688/1‑140 (MQ=255)

                                                                          tCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAACGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctc                                                            <  1:854747/140‑1 (MQ=255)

                                                                           cGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctct                                                           <  1:107352/140‑1 (MQ=255)

                                                                           cGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctct                                                           <  1:1053183/140‑1 (MQ=255)

                                                                           cGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGctct                                                           <  1:2970640/140‑1 (MQ=255)

                                                                             tCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTTAAACTTTAACGGAACTGACGCAAACGTCa                                                                      <  2:1383937/127‑1 (MQ=255)

                                                                              cAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTAcc                                                        >  2:3168232/1‑140 (MQ=255)

                                                                               aaCTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACg                                                               >  1:3126062/1‑132 (MQ=255)

                                                                               aaCTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACg                                                               <  2:3126062/132‑1 (MQ=255)

                                                                                aCTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGt                                                      >  1:2288880/1‑140 (MQ=255)

                                                                                 cTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTa                                                     <  1:3168232/140‑1 (MQ=255)

                                                                                         ggTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGc                                             <  2:2757183/140‑1 (MQ=255)

                                                                                         ggTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGc                                             <  1:534909/140‑1 (MQ=255)

                                                                                           tAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCATATCAGGTGCAt                                           <  1:75510/140‑1 (MQ=255)

                                                                                            aGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTa                                                     >  2:391357/1‑129 (MQ=255)

                                                                                            aGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTa                                                     <  1:391357/129‑1 (MQ=255)

                                                                                            aGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATc                                          >  2:198706/1‑140 (MQ=255)

                                                                                            aGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATc                                          >  1:2331248/1‑140 (MQ=255)

                                                                                               tCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTAc                                                         >  2:2728409/1‑122 (MQ=255)

                                                                                               tCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGt                                       <  1:125877/140‑1 (MQ=255)

                                                                                                  ggTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCg                                    >  1:644261/1‑140 (MQ=255)

                                                                                                  ggTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCg                                    >  1:633627/1‑140 (MQ=255)

                                                                                                    ttGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAg                                                 <  2:2845405/125‑1 (MQ=255)

                                                                                                    ttGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGcc                                  >  1:2654912/1‑140 (MQ=255)

                                                                                                    ttGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGcc                                  >  2:1130642/1‑140 (MQ=255)

                                                                                                     tGCGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCa                                 >  2:357655/1‑140 (MQ=255)

                                                                                                       cGGCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATc                               >  2:683835/1‑140 (MQ=255)

                                                                                                        ggCAGCAAGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCg                              >  2:1498684/1‑140 (MQ=255)

                                                                                                               aGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCTTTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       <  2:1681195/140‑1 (MQ=255)

                                                                                                               aGGATTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       <  1:1706919/140‑1 (MQ=255)

                                                                                                               aGGATTCATCCAAATGATCCACAAATCCTTTCCCGGGCACTAAAAGTTTTTTTCATTCCGGGTAAAACTTTAACGGAACTGACGCAATCGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       <  2:188153/140‑1 (MQ=255)

                                                                                                                  aTTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAg                    <  2:2595080/140‑1 (MQ=255)

                                                                                                                  aTTCATCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAg                    <  2:2288880/140‑1 (MQ=255)

                                                                                                                       tCCAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTg               <  1:1498684/140‑1 (MQ=255)

                                                                                                                        ccAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGa              <  2:1232836/140‑1 (MQ=255)

                                                                                                                        ccAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGa              <  2:1213881/140‑1 (MQ=255)

                                                                                                                         cAAATGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGaa             <  1:1349216/140‑1 (MQ=255)

                                                                                                                           aaTGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCg                         <  1:11855/126‑1 (MQ=255)

                                                                                                                           aaTGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACt           <  2:2340219/140‑1 (MQ=255)

                                                                                                                            aTGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGc                       >  2:650680/1‑127 (MQ=255)

                                                                                                                            aTGATCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTg          >  2:2315190/1‑140 (MQ=255)

                                                                                                                            aTGATCCACAAATGCTTTCCCGGGCACTGGAAGCTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAACCGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTg          >  2:518403/1‑140 (MQ=255)

                                                                                                                             tGATCCACAAATGTTTCCCCGGGCCCTGGAAGTTTTTTTCATTTCGGGTAAACATTTAACGGAGCTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCATTTCGCCACCGCCCCGGCGAGCCGTGAACTGc         <  2:2388568/140‑1 (MQ=255)

                                                                                                                                tCCACAAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTcc      >  1:862366/1‑140 (MQ=255)

                                                                                                                                  cacaAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTc       <  1:2515738/137‑1 (MQ=255)

                                                                                                                                  cacaAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCAt    <  2:2960296/140‑1 (MQ=255)

                                                                                                                                    caAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCa  <  2:351767/140‑1 (MQ=255)

                                                                                                                                    caAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCa  <  2:750669/140‑1 (MQ=255)

                                                                                                                                    caAATGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCa  <  2:2654912/140‑1 (MQ=255)

CTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCA  >  NC_000913/4399615‑4399886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`