BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,673,403	G→T	G33G (GGC→GGA)	mdtJ ←	multidrug/spermidine efflux pump membrane subunit MdtJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,673,403	0	G	T	100.0%	505.1 / NA	142	G33G (GGC→GGA)	mdtJ	multidrug/spermidine efflux pump membrane subunit MdtJ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (72/70); total (72/70)

Only 100 of 145 total aligned reads displayed.

AAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTT  >  NC_000913/1673269‑1673534

       tAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTccc                                                                                                                         >  1:2541232/1‑140 (MQ=255)

       tAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCAATAAAATAAATCCGCCATTTccc                                                                                                                         >  2:1335408/1‑140 (MQ=255)

         aaCAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTc                                                                                                                       >  2:591268/1‑140 (MQ=255)

           cAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCAc                                                                                                                     <  2:949498/140‑1 (MQ=255)

              ggTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGa                                                                                                                  >  1:438371/1‑140 (MQ=255)

              ggTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGa                                                                                                                  >  1:1355748/1‑140 (MQ=255)

                   taaataaaATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTc                                                                                                             >  2:1691088/1‑140 (MQ=255)

                       taaaataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGccc                                                                                                         <  2:1355748/140‑1 (MQ=255)

                        aaaataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACg                                                                                                                <  2:2468641/132‑1 (MQ=255)

                        aaaataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCa                                                                                                        >  1:530316/1‑140 (MQ=255)

                        aaaataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCa                                                                                                        >  2:230436/1‑140 (MQ=255)

                         aaataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCAt                                                                                                       >  2:1541043/1‑140 (MQ=255)

                          aataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCAtt                                                                                                      >  1:2577568/1‑140 (MQ=255)

                          aataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCAtt                                                                                                      >  2:15856/1‑140 (MQ=255)

                          aataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCAtt                                                                                                      >  1:2387849/1‑140 (MQ=255)

                          aataCCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTAGCCCAtt                                                                                                      >  2:249574/1‑140 (MQ=255)

                              ccGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCAt                                                                                                  <  1:2242703/140‑1 (MQ=255)

                               cGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGc                                                                                                               >  2:2174570/1‑126 (MQ=255)

                               cGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGc                                                                                                               <  1:2174570/126‑1 (MQ=255)

                                gATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTg                                                                                                >  1:2490666/1‑140 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCt                                                                                                              >  1:387347/1‑125 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCt                                                                                                              <  2:387347/125‑1 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGa                                                                                               >  1:806771/1‑140 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGa                                                                                               >  1:947746/1‑140 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGa                                                                                               >  1:1564676/1‑140 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGa                                                                                               >  1:2020787/1‑140 (MQ=255)

                                 aTACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGa                                                                                               >  2:1790345/1‑140 (MQ=255)

                                   aCCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACa                                                                                             <  2:2020787/140‑1 (MQ=255)

                                        cccACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTa                                                                                        >  1:625012/1‑140 (MQ=255)

                                        cccACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTa                                                                                        >  1:425614/1‑140 (MQ=255)

                                        cccACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTa                                                                                        >  2:3078122/1‑140 (MQ=255)

                                        cccACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTa                                                                                        <  1:1790345/140‑1 (MQ=255)

                                             aGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGt                                                                                   <  1:1346539/140‑1 (MQ=255)

                                             aGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGt                                                                                   <  2:425614/140‑1 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTAc                                                                                       >  1:1881150/1‑134 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  2:1169154/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  1:1014161/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  1:3106291/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  1:1825845/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  1:2194450/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  1:22162/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTaa                                                                                 >  1:2471427/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAAT‑AATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAt                                                                                >  1:2648524/1‑140 (MQ=255)

                                               cgcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATT‑AAATAAATCCGCCATTTCCCCCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAt                                                                                >  1:1568761/1‑140 (MQ=255)

                                                gcATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAt                                                                                <  2:530316/140‑1 (MQ=255)

                                                 cATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCg                                                                                          <  1:2797236/129‑1 (MQ=255)

                                                 cATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCg                                                                                          >  2:2797236/1‑129 (MQ=255)

                                                 cATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAtt                                                                               >  1:1887829/1‑140 (MQ=255)

                                                  aTAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAttt                                                                              >  1:211825/1‑140 (MQ=255)

                                                     aGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTg                                                                           <  2:947746/140‑1 (MQ=255)

                                                     aGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTg                                                                           <  2:2214130/140‑1 (MQ=255)

                                                     aGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTg                                                                           <  2:2166203/140‑1 (MQ=255)

                                                         aCGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAt                                                                                >  2:3007082/1‑131 (MQ=255)

                                                         aCGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAAt                                                                                <  1:3007082/131‑1 (MQ=255)

                                                         aCGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTg                                                                           <  2:698488/136‑1 (MQ=255)

                                                         aCGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGc                                                                       >  1:2166119/1‑140 (MQ=255)

                                                         aCGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGc                                                                       >  1:950306/1‑140 (MQ=255)

                                                         aCGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGc                                                                       <  2:3106291/140‑1 (MQ=255)

                                                          cGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCa                                                                      <  2:211825/140‑1 (MQ=255)

                                                          cGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCa                                                                      <  2:2541232/140‑1 (MQ=255)

                                                          cGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCa                                                                      <  1:2004827/140‑1 (MQ=255)

                                                          cGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCa                                                                      <  2:1717792/140‑1 (MQ=255)

                                                               aaGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGc                                                                 <  1:3072041/140‑1 (MQ=255)

                                                                aGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGcc                                                                >  1:2930895/1‑140 (MQ=255)

                                                                aGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGcc                                                                >  1:1262086/1‑140 (MQ=255)

                                                                aGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGcc                                                                <  2:2640615/140‑1 (MQ=255)

                                                                aGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGcc                                                                <  1:15856/140‑1 (MQ=255)

                                                                aGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGcc                                                                <  2:22162/140‑1 (MQ=255)

                                                                 ggCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCa                                                               >  2:2940551/1‑140 (MQ=255)

                                                                     aTTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGAcc                                                           <  2:2387849/140‑1 (MQ=255)

                                                                            tAACGCCGAAAGAGAGAAATATATACAACAGAGAAATAACCCCCAGCATT‑AAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATaaaa                                                   <  2:1568761/140‑1 (MQ=255)

                                                                                ggCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATcc                                                <  2:2843768/140‑1 (MQ=255)

                                                                                ggCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATcc                                                <  2:2298343/140‑1 (MQ=255)

                                                                                 gCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCtaata                                                      <  2:925253/133‑1 (MQ=255)

                                                                                  cGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATGGCCAGACCTAATAAAATCCaa                                              <  2:115248/140‑1 (MQ=255)

                                                                                  cGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaa                                              <  2:354721/140‑1 (MQ=255)

                                                                                  cGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaa                                              <  1:1151537/140‑1 (MQ=255)

                                                                                  cGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaa                                              <  1:1691088/140‑1 (MQ=255)

                                                                                  cGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaa                                              <  1:2556195/140‑1 (MQ=255)

                                                                                  cGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaa                                              <  2:1887829/140‑1 (MQ=255)

                                                                                   gAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAAT‑AATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaata                                            <  2:2648524/140‑1 (MQ=255)

                                                                                          agaAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaataaat                                         <  1:2387772/137‑1 (MQ=255)

                                                                                           gaAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCaata                                            >  1:1607783/1‑133 (MQ=255)

                                                                                            aaaTATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACa                                    <  2:1262086/140‑1 (MQ=255)

                                                                                            aaaTATATACGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACa                                    <  2:1825845/140‑1 (MQ=255)

                                                                                                 tataCGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTc                               >  2:693160/1‑140 (MQ=255)

                                                                                                    aCGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTg                                 >  2:327142/1‑135 (MQ=255)

                                                                                                    aCGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTg                                 <  1:327142/135‑1 (MQ=255)

                                                                                                     cGACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTtc                           <  1:2940551/140‑1 (MQ=255)

                                                                                                      gACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACa                                    <  2:846289/130‑1 (MQ=255)

                                                                                                      gACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACa                                    >  1:846289/1‑130 (MQ=255)

                                                                                                      gACAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTtct                          >  1:1441017/1‑140 (MQ=255)

                                                                                                        cAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACa                                    >  2:2199103/1‑128 (MQ=255)

                                                                                                        cAGAGAAATCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACa                                    <  1:2199103/128‑1 (MQ=255)

                                                                                                              aaTCATCACCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAag                  >  1:1069134/1‑140 (MQ=255)

                                                                                                                  atcaCCAGCATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGaa              >  2:1762937/1‑140 (MQ=255)

                                                                                                                          cATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTa      >  2:2955683/1‑140 (MQ=255)

                                                                                                                          cATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTa      >  2:195788/1‑140 (MQ=255)

                                                                                                                          cATTAAAATAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTa      >  2:1159386/1‑140 (MQ=255)

                                                                                                                              aaaaTAAATCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAAttt  <  2:2876471/140‑1 (MQ=255)

AAAACGCTAAACAAGGTAATAAATAAAATACCGATACCTTCCCACAGCGCATAAGCTACGCCTAAGGCGATTTTTTTAACGGCGAAAGAGAGAAATATATACGACAGAGAAATCATCACCAGCATTAAAATAAAGCCGCCATTTCCCTCACTGACGCTCGCCCATTTCATTGACAGCGTACCGGTAATTTCTGTAGCAATAGCCAGACCTAATAAAATCCAATAAATATACATTGTCCTTCTCCTGCAAGAGAATTATTTTAATTT  >  NC_000913/1673269‑1673534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`