BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,564,482	T→C	intergenic (+110/‑41)	yffR → / → yffS	CPZ‑55 prophage; uncharacterized protein YffR/CPZ‑55 prophage; uncharacterized protein YffS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,564,482	0	T	C	100.0%	484.8 / NA	132	intergenic (+110/‑41)	yffR/yffS	CPZ‑55 prophage; uncharacterized protein YffR/CPZ‑55 prophage; uncharacterized protein YffS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/62); total (70/62)

Only 100 of 134 total aligned reads displayed.

GGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATC  >  NC_000913/2564346‑2564618

ggtagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTaa                                                                                                                                       <  2:2169067/140‑1 (MQ=255)

 gtagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAAc                                                                                                                                      <  1:371555/140‑1 (MQ=255)

  tagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAAcc                                                                                                                                     >  2:1611223/1‑140 (MQ=255)

  tagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAAcc                                                                                                                                     >  2:2431302/1‑140 (MQ=255)

  tagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGG‑TTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCt                                                                                                                                    >  1:2555339/1‑140 (MQ=255)

    gagTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTc                                                                                                                                   <  1:1073477/140‑1 (MQ=255)

     agTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTcc                                                                                                                                  >  1:273068/1‑140 (MQ=255)

     agTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTcc                                                                                                                                  >  1:1594315/1‑140 (MQ=255)

      gTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGG‑TTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCa                                                                                                                                <  2:2555339/140‑1 (MQ=255)

         tttGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAAt                                                                                                                              <  1:961296/140‑1 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCaa                                                                                                                               >  1:1104753/1‑136 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATg                                                                                                                             >  1:359803/1‑138 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATg                                                                                                                             <  2:359803/138‑1 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGa                                                                                                                           >  1:1844173/1‑140 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGa                                                                                                                           <  1:1931300/140‑1 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGa                                                                                                                           <  2:1594315/140‑1 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGa                                                                                                                           <  2:70111/140‑1 (MQ=255)

            gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGa                                                                                                                           >  2:1133360/1‑140 (MQ=255)

             aaaaaCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGAt                                                                                                                          >  2:226511/1‑140 (MQ=255)

               aaaCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTc                                                                                                                        <  2:2358512/140‑1 (MQ=255)

                 aCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTc                                                                                                                                   >  2:1827659/1‑127 (MQ=255)

                 aCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGa                                                                                                                           >  1:2253586/1‑135 (MQ=255)

                          attgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTa                                                                                                                      <  2:2142741/131‑1 (MQ=255)

                          attgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTa                                                                                                                      >  1:2142741/1‑131 (MQ=255)

                           ttgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGga                                                                                                            >  1:2118931/1‑140 (MQ=255)

                            tgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATgg                                                                                                                            >  2:1723945/1‑123 (MQ=255)

                            tgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATgg                                                                                                                            <  1:1723945/123‑1 (MQ=255)

                             gCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTc                                                                                                                        <  2:1152379/126‑1 (MQ=255)

                             gCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTc                                                                                                                        >  1:1152379/1‑126 (MQ=255)

                             gCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGgaga                                                                                                          >  1:1266493/1‑140 (MQ=255)

                                       acaacTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCAt                                                                                                <  2:1844173/140‑1 (MQ=255)

                                                             cGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGc                                                                          >  2:485132/1‑140 (MQ=255)

                                                             cGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGc                                                                          >  1:1296849/1‑140 (MQ=255)

                                                              ggCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         <  1:1611223/140‑1 (MQ=255)

                                                              ggCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         >  2:188147/1‑140 (MQ=255)

                                                              ggCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         <  2:199486/140‑1 (MQ=255)

                                                              ggCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         <  2:2118931/140‑1 (MQ=255)

                                                              ggCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         <  2:1266493/140‑1 (MQ=255)

                                                              ggCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         >  1:1777079/1‑140 (MQ=255)

                                                               gCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAAt                                                                                    >  1:860836/1‑128 (MQ=255)

                                                               gCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAAt                                                                                    <  2:860836/128‑1 (MQ=255)

                                                               gCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGa                                                                        >  2:1394035/1‑140 (MQ=255)

                                                               gCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGa                                                                        >  1:2102079/1‑140 (MQ=255)

                                                               gCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGa                                                                        >  2:2588322/1‑140 (MQ=255)

                                                                ccccTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGAc                                                                       >  1:588147/1‑140 (MQ=255)

                                                                 cccTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACa                                                                      <  1:2445827/140‑1 (MQ=255)

                                                                    tCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCg                                                                         >  2:2108713/1‑134 (MQ=255)

                                                                    tCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGAc                                                                       <  2:394277/136‑1 (MQ=255)

                                                                    tCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATcc                                                                   >  2:1094095/1‑140 (MQ=255)

                                                                      gCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTc                                                                 >  1:2103756/1‑140 (MQ=255)

                                                                             tttttGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGgcg                                                          <  2:1777079/140‑1 (MQ=255)

                                                                                       cTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGa                                                <  1:1060874/140‑1 (MQ=255)

                                                                                          cGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAg                                              <  1:1423650/139‑1 (MQ=255)

                                                                                          cGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAg                                              >  2:1423650/1‑139 (MQ=255)

                                                                                           gTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa                                            <  1:2431302/140‑1 (MQ=255)

                                                                                           gTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa                                            <  2:856068/140‑1 (MQ=255)

                                                                                           gTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa                                            <  1:188147/140‑1 (MQ=255)

                                                                                           gTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa                                            <  2:801753/140‑1 (MQ=255)

                                                                                           gTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa                                            <  1:1346512/140‑1 (MQ=255)

                                                                                           gTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa                                            <  2:588147/140‑1 (MQ=255)

                                                                                                 atTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTC‑AAGGCGCTGCGATGGAAGGACAAtata                                     >  1:988462/1‑140 (MQ=255)

                                                                                                    cccTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAg                                   >  2:1910195/1‑140 (MQ=255)

                                                                                                     ccTTCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAgg                                  <  2:2541589/140‑1 (MQ=255)

                                                                                                       ttCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgc                                >  2:1766008/1‑140 (MQ=255)

                                                                                                       ttCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgc                                >  1:422663/1‑140 (MQ=255)

                                                                                                       ttCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgc                                >  2:2312235/1‑140 (MQ=255)

                                                                                                       ttCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgc                                >  1:2383729/1‑140 (MQ=255)

                                                                                                        tCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcg                               >  1:1125328/1‑140 (MQ=255)

                                                                                                        tCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcg                               >  1:1873938/1‑140 (MQ=255)

                                                                                                        tCCGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcg                               >  2:1188511/1‑140 (MQ=255)

                                                                                                         ccGTTACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGgcgc                              >  1:825633/1‑140 (MQ=255)

                                                                                                            ttACGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCa                           >  2:2398446/1‑140 (MQ=255)

                                                                                                               cGCTTACCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACg                        >  2:1930292/1‑140 (MQ=255)

                                                                                                                   ttcccTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAAGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTggg                    <  2:1296849/138‑1 (MQ=255)

                                                                                                                    aCCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAgg                                  <  1:2108394/125‑1 (MQ=255)

                                                                                                                    aCCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAAc                         <  1:835341/134‑1 (MQ=255)

                                                                                                                    aCCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGt                       <  1:675893/136‑1 (MQ=255)

                                                                                                                    aCCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTgggg                   >  1:1994492/1‑140 (MQ=255)

                                                                                                                    aCCCTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTgggg                   >  1:629657/1‑140 (MQ=255)

                                                                                                                    aCCCTCCAACAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAgg                                  >  2:2108394/1‑125 (MQ=255)

                                                                                                                     cccTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGc                  <  1:485132/140‑1 (MQ=255)

                                                                                                                      ccTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGc                  <  2:1661253/139‑1 (MQ=255)

                                                                                                                       cTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGGTGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa                <  1:1133360/140‑1 (MQ=255)

                                                                                                                       cTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa                <  2:2383729/140‑1 (MQ=255)

                                                                                                                       cTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa                <  1:2588322/140‑1 (MQ=255)

                                                                                                                       cTCCACCAATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCa                <  1:1930292/140‑1 (MQ=255)

                                                                                                                         ccaccaATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGc                  <  1:530469/136‑1 (MQ=255)

                                                                                                                         ccaccaATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGc                  >  2:530469/1‑136 (MQ=255)

                                                                                                                          caccaATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGt                       >  2:1399001/1‑130 (MQ=255)

                                                                                                                          caccaATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAAt             >  1:1674266/1‑140 (MQ=255)

                                                                                                                          caccaATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAAt             >  2:123910/1‑140 (MQ=255)

                                                                                                                           accaATACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATg            >  1:1277144/1‑140 (MQ=255)

                                                                                                                               aTACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgag        <  2:629657/140‑1 (MQ=255)

                                                                                                                               aTACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgag        <  2:825633/140‑1 (MQ=255)

                                                                                                                                tACGCGTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgagg       >  1:383189/1‑140 (MQ=255)

                                                                                                                                  cgcgTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCgaggag     >  2:222067/1‑140 (MQ=255)

                                                                                                                                    cgTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaaa              <  1:102346/129‑1 (MQ=255)

                                                                                                                                    cgTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCaaa              >  2:102346/1‑129 (MQ=255)

                                                                                                                                    cgTGCTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGAt   >  1:807497/1‑140 (MQ=255)

                                                                                                                                     gtgcTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATc  <  1:123910/140‑1 (MQ=255)

GGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATC  >  NC_000913/2564346‑2564618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`