| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,132,505 | C→A | intergenic (+238/‑111) | metL → / → metF | fused aspartate kinase/homoserine dehydrogenase 2/5,10‑methylenetetrahydrofolate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,132,505 | 0 | C | A | 98.9% | 615.3 / ‑3.1 | 175 | intergenic (+238/‑111) | metL/metF | fused aspartate kinase/homoserine dehydrogenase 2/5,10‑methylenetetrahydrofolate reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (79/94); minor base G (1/1); total (80/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.26e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
GAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTCATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGAGGTAAGGTATGAGCTTTTTTCACGCCAGCCA > NC_000913/4132372‑4132638 | gaATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAAttttt > 1:1099773/1‑140 (MQ=255) aaTCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTc > 2:81542/1‑140 (MQ=255) aTCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAAttttt > 2:745593/1‑138 (MQ=255) aTCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAAttttt < 1:745593/138‑1 (MQ=255) aTCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCg > 2:2399537/1‑140 (MQ=255) tCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCgg > 1:1684455/1‑140 (MQ=255) agCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCt < 1:2120202/140‑1 (MQ=255) gCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCtt < 1:571516/140‑1 (MQ=255) aTAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGa < 1:259813/130‑1 (MQ=255) aaGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCt < 1:566945/140‑1 (MQ=255) aaGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCt < 1:2460830/140‑1 (MQ=255) aaGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCt < 2:1070846/140‑1 (MQ=255) gTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCttt > 2:380607/1‑140 (MQ=255) cATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTcc > 1:118909/1‑140 (MQ=255) cATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTcc > 1:229740/1‑140 (MQ=255) aTGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCGTCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCt < 2:1196950/140‑1 (MQ=255) aTGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACg < 1:1985543/124‑1 (MQ=255) aTGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCtt > 2:1289407/1‑129 (MQ=255) aTGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCt > 2:2462118/1‑140 (MQ=255) tGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTGATTTTTCGGTTGACGCCCt < 1:391492/127‑1 (MQ=255) tGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTGATTTTTCGGTTGACGCCCt > 2:391492/1‑127 (MQ=255) tGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCtt < 1:2567579/140‑1 (MQ=255) ggTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTc < 2:229740/140‑1 (MQ=255) gTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCa > 2:1814624/1‑140 (MQ=255) tAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATc > 1:1467807/1‑140 (MQ=255) tAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATc > 1:1430985/1‑140 (MQ=255) aGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCt < 2:1807349/140‑1 (MQ=255) gTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCt > 1:418826/1‑133 (MQ=255) tatTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACAt > 2:369920/1‑140 (MQ=255) atTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATc > 2:1444117/1‑140 (MQ=255) ttGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTg < 1:2399537/140‑1 (MQ=255) ttGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTg < 1:850487/140‑1 (MQ=255) tGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTgg < 2:737380/140‑1 (MQ=255) gCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACAt < 1:2333763/135‑1 (MQ=255) gCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTgg < 2:1559318/139‑1 (MQ=255) gCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTgg > 1:1559318/1‑139 (MQ=255) cAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTc < 1:1839777/124‑1 (MQ=255) cAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTc > 2:1839777/1‑124 (MQ=255) cAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTg > 1:860538/1‑137 (MQ=255) cAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTg < 2:860538/137‑1 (MQ=255) tCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTc < 2:442425/140‑1 (MQ=255) ccGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCt > 2:1675618/1‑140 (MQ=255) ggTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTaa < 2:1684455/140‑1 (MQ=255) ggTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTaa < 1:1814908/140‑1 (MQ=255) tttgctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTg < 2:2649944/129‑1 (MQ=255) tttgctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTg > 1:2649944/1‑129 (MQ=255) tttgccttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAAc > 1:448442/1‑140 (MQ=255) tgctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAG‑TTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa < 1:174228/140‑1 (MQ=255) gctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa < 1:391825/140‑1 (MQ=255) gctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa < 1:369920/140‑1 (MQ=255) gctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa < 2:571832/140‑1 (MQ=255) gctttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa < 2:2120806/140‑1 (MQ=255) ttgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAg < 2:1695643/140‑1 (MQ=255) tgcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGa > 2:2044824/1‑140 (MQ=255) gcATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGAt < 2:1884140/140‑1 (MQ=255) cATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCt > 1:359826/1‑127 (MQ=255) cATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCt < 2:359826/127‑1 (MQ=255) tACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGAtgtg < 2:1394020/140‑1 (MQ=255) aCCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa < 1:1003765/131‑1 (MQ=255) aCCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGa > 2:1003765/1‑131 (MQ=255) cGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAg < 2:383921/132‑1 (MQ=255) cGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca > 2:1484157/1‑139 (MQ=255) ttttctttttctTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGcacaaca < 1:176516/140‑1 (MQ=255) ttttctttttctTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGcacaaca < 1:1444117/140‑1 (MQ=255) ttttctttttctTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGcacaaca < 2:1099773/140‑1 (MQ=255) ttttctttttctTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGcacaaca < 2:1948615/140‑1 (MQ=255) tttctttttcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca < 2:593877/134‑1 (MQ=255) ttcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACatat < 1:1537521/140‑1 (MQ=255) tcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca > 2:1634813/1‑126 (MQ=255) tcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca < 1:1634813/126‑1 (MQ=255) tcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca < 1:576083/126‑1 (MQ=255) tcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca > 2:672279/1‑126 (MQ=255) tcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca < 1:672279/126‑1 (MQ=255) tcttACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca > 2:576083/1‑126 (MQ=255) aCCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGca > 2:2326059/1‑122 (MQ=255) aCCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTa > 2:2627147/1‑140 (MQ=255) tCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAg < 2:1467807/140‑1 (MQ=255) ccTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGc > 1:1979533/1‑140 (MQ=255) ccTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGc < 1:2044824/140‑1 (MQ=255) cTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCg > 1:1352570/1‑140 (MQ=255) cTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCg < 2:1352570/140‑1 (MQ=255) cTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCg > 1:113070/1‑140 (MQ=255) tGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGa < 1:1812393/140‑1 (MQ=255) gAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGAt < 1:380717/140‑1 (MQ=255) aaGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGAtt > 2:1818813/1‑140 (MQ=255) aGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtg < 2:113070/140‑1 (MQ=255) gTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtga < 2:2580470/140‑1 (MQ=255) ttttttCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtgat < 1:2462118/140‑1 (MQ=255) ttttttCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtgat < 1:81542/140‑1 (MQ=255) ttttCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtgatga > 1:1252334/1‑140 (MQ=255) tttCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtg > 2:2300253/1‑135 (MQ=255) tttCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtg < 1:2300253/135‑1 (MQ=255) ttCATCTTCCCTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGagg > 1:630701/1‑140 (MQ=255) cccTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGAt > 2:40528/1‑124 (MQ=255) cccTGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATtgat > 1:585117/1‑128 (MQ=255) tGATTTTTCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAAC‑TATAACTACAAGCGATtgat > 1:1140951/1‑124 (MQ=255) tCCTCACCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGAGGTAAGGTATGAGCtttttt > 2:1971815/1‑140 (MQ=255) aCCATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGAGGTAAGGTATGAGCTTTTTTCACgc > 1:1018574/1‑140 (MQ=255) ccATCATTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGAGGTAAGGTATGAGCTTTTTTCACgcc > 1:646688/1‑140 (MQ=255) catTGGTAATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGAGGTAAGGTATGAGCTTTTTTCACgccagcc > 2:2368353/1‑140 (MQ=255) | GAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGATTTTCTTTTTCTTACCATCCTGAAGTTTTTTCATCTTCCCTGATTTTTCCTCACCATCATTGGTCATTTTTCGGTTGACGCCCTTCGGCTTTTCCTTCATCTTTACATCTGGACGTCTAAACGGATAGATGTGCACAACACAACATATAACTACAAGCGATTGATGAGGTAAGGTATGAGCTTTTTTCACGCCAGCCA > NC_000913/4132372‑4132638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |