BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,377,990	G→T	P319T (CCC→ACC)	ampC ←	beta‑lactamase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,377,990	0	G	T	100.0%	604.9 / NA	176	P319T (CCC→ACC)	ampC	beta‑lactamase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (92/84); total (92/84)

Only 100 of 179 total aligned reads displayed.

CGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGGCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAG  >  NC_000913/4377853‑4378123

  cTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTa                                                                                                                                   <  1:809280/140‑1 (MQ=255)

    ggATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAAt                                                                                                                                 <  1:1262561/140‑1 (MQ=255)

    ggATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAAt                                                                                                                                 <  1:1418819/140‑1 (MQ=255)

      aTTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCg                                                                                                                               <  2:1856559/140‑1 (MQ=255)

         gggATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCtt                                                                                                                            >  1:1957900/1‑140 (MQ=255)

          ggATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCttt                                                                                                                           >  2:762257/1‑140 (MQ=255)

          ggATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCttt                                                                                                                           >  2:1076935/1‑140 (MQ=255)

             tAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTAc                                                                                                                        <  2:1066051/140‑1 (MQ=255)

               gTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACgg                                                                                                                      <  1:2469323/140‑1 (MQ=255)

               gTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACgg                                                                                                                      >  1:946990/1‑140 (MQ=255)

               gTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACgg                                                                                                                      <  1:2019955/140‑1 (MQ=255)

                    tgtttgCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTa                                                                                                                                   >  1:1842315/1‑122 (MQ=255)

                     gtttgCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGtg                                                                                                                >  1:1879371/1‑140 (MQ=255)

                         gCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGtgctgc                                                                                                            <  1:2500509/140‑1 (MQ=255)

                          ccAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGCCGTAATCGCTTTTACGGGGCGTGCTGcc                                                                                                           >  2:918168/1‑140 (MQ=255)

                              cATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACgg                                                                                                                      <  1:143424/125‑1 (MQ=255)

                              cATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACgg                                                                                                                      >  2:143424/1‑125 (MQ=255)

                              cATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTg                                                                                                       <  1:908452/140‑1 (MQ=255)

                                   cGATACCCAGCTCTTTTTCTGAAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAAtt                                                                                                  >  1:1561416/1‑140 (MQ=255)

                                        cccAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTAtt                                                                                             >  1:1244332/1‑140 (MQ=255)

                                        cccAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTAtt                                                                                             >  2:2386878/1‑140 (MQ=255)

                                        cccAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTAtt                                                                                             >  1:82342/1‑140 (MQ=255)

                                           aGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCa                                                                                                          <  2:890397/124‑1 (MQ=255)

                                           aGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCa                                                                                                          >  1:890397/1‑124 (MQ=255)

                                           aGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTg                                                                                                       <  1:1380026/127‑1 (MQ=255)

                                           aGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGta                                                                                          >  1:2262463/1‑139 (MQ=255)

                                            gCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCa                                                                                         >  2:166230/1‑140 (MQ=255)

                                            gCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCa                                                                                         <  2:1742183/140‑1 (MQ=255)

                                             ctctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCa                                                                                         >  2:131687/1‑139 (MQ=255)

                                             ctctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCAc                                                                                        <  2:1957900/140‑1 (MQ=255)

                                             ctctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCAc                                                                                        >  2:433153/1‑140 (MQ=255)

                                              tctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACt                                                                                       <  2:1879371/140‑1 (MQ=255)

                                              tctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACt                                                                                       <  2:2007454/140‑1 (MQ=255)

                                              tctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACt                                                                                       <  1:166230/140‑1 (MQ=255)

                                              tctTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCAAGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACt                                                                                       <  1:2344292/140‑1 (MQ=255)

                                                tttttCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTg                                                                                                       <  1:1087371/122‑1 (MQ=255)

                                                  tttCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCa                                                                                         >  1:993088/1‑134 (MQ=255)

                                                  tttCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCAc                                                                                        <  1:42780/135‑1 (MQ=255)

                                                      tGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTaa                                                                               <  1:1570229/140‑1 (MQ=255)

                                                       ggAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGc                                                                                     >  1:686619/1‑133 (MQ=255)

                                                       ggAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAat                                                                              >  2:2079697/1‑140 (MQ=255)

                                                       ggAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAat                                                                              >  2:2572580/1‑140 (MQ=255)

                                                         aaTAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAatga                                                                            <  1:1161379/140‑1 (MQ=255)

                                                          aTAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAatgat                                                                           <  1:2079697/140‑1 (MQ=255)

                                                           tAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAatgatg                                                                          <  2:1561416/140‑1 (MQ=255)

                                                              aCGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTaa                                                                               <  2:1461946/132‑1 (MQ=255)

                                                              aCGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTg                                                                       >  2:2188144/1‑140 (MQ=255)

                                                               cgcgACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGt                                                                      <  2:1098011/140‑1 (MQ=255)

                                                                   aCATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAgg                                                                  >  2:674416/1‑140 (MQ=255)

                                                                            ccAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCgg                                                         >  1:33536/1‑140 (MQ=255)

                                                                             cAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGc                                                        >  2:252555/1‑140 (MQ=255)

                                                                             cAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGc                                                        >  2:58400/1‑140 (MQ=255)

                                                                             cAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGc                                                        <  2:1244332/140‑1 (MQ=255)

                                                                              aaaTCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGAGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGcc                                                       >  1:917613/1‑140 (MQ=255)

                                                                                 tCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGc                                                        <  2:1517474/136‑1 (MQ=255)

                                                                                 tCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGt                                                    >  2:13547/1‑140 (MQ=255)

                                                                                  ccgccgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTc                                                   <  2:82342/140‑1 (MQ=255)

                                                                                   cgccgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTcc                                                  >  2:226457/1‑140 (MQ=255)

                                                                                    gccgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGc                                                        <  1:359158/133‑1 (MQ=255)

                                                                                     ccgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAg                                                >  2:651278/1‑140 (MQ=255)

                                                                                      cgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTc                                                   <  2:1391111/136‑1 (MQ=255)

                                                                                      cgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGc                                               >  2:1713353/1‑140 (MQ=255)

                                                                                      cgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGc                                               >  1:1332901/1‑140 (MQ=255)

                                                                                      cgGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGc                                               >  2:2226892/1‑140 (MQ=255)

                                                                                            ccccTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcc                                         <  2:946990/140‑1 (MQ=255)

                                                                                            ccccTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcc                                         <  1:1748270/140‑1 (MQ=255)

                                                                                             cccTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTccc                                        >  1:384507/1‑140 (MQ=255)

                                                                                                   tttATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  <  1:1713353/140‑1 (MQ=255)

                                                                                                   tttATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  <  1:2220577/140‑1 (MQ=255)

                                                                                                     tATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAgg                                <  1:1412332/140‑1 (MQ=255)

                                                                                                       tGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCTAGTCCAGCATTTCCCAGCCCAGGcc                              <  1:446803/140‑1 (MQ=255)

                                                                                                       tGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  >  2:1180847/1‑136 (MQ=255)

                                                                                                       tGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGcc                              >  2:416512/1‑140 (MQ=255)

                                                                                                       tGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGcc                              <  2:384507/140‑1 (MQ=255)

                                                                                                       tGTACCCATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGcc                              >  2:13273/1‑140 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  <  1:637941/131‑1 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  >  1:1203925/1‑131 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  <  1:265962/131‑1 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  >  2:265962/1‑131 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTc                                          <  2:2475666/123‑1 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGAt                         >  1:2471880/1‑140 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGAt                         >  1:2120636/1‑140 (MQ=255)

                                                                                                            ccATGATGCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGAt                         >  1:2015634/1‑140 (MQ=255)

                                                                                                               tgatgCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagccca                                  <  1:1463687/128‑1 (MQ=255)

                                                                                                               tgatgCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagcc                                    >  2:2435256/1‑126 (MQ=255)

                                                                                                               tgatgCGCGTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTcccagcc                                    <  1:2435256/126‑1 (MQ=255)

                                                                                                                      cgTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGcc                              >  1:2315621/1‑125 (MQ=255)

                                                                                                                      cgTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGcc                              <  2:2315621/125‑1 (MQ=255)

                                                                                                                      cgTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGcc               >  1:1819433/1‑140 (MQ=255)

                                                                                                                      cgTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGcc               <  1:226457/140‑1 (MQ=255)

                                                                                                                      cgTACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGcc               >  1:627755/1‑140 (MQ=255)

                                                                                                                        tACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCgg             <  2:2120636/140‑1 (MQ=255)

                                                                                                                        tACTGCAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCgg             <  2:811814/140‑1 (MQ=255)

                                                                                                                             cAGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGc        <  2:1819433/140‑1 (MQ=255)

                                                                                                                              aGGAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGcc       >  2:1837485/1‑140 (MQ=255)

                                                                                                                               ggAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCa      >  2:620023/1‑140 (MQ=255)

                                                                                                                                gAGTTGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAg     >  1:102657/1‑140 (MQ=255)

                                                                                                                                   ttGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGcc       >  2:300911/1‑135 (MQ=255)

                                                                                                                                   ttGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAg  >  1:1509526/1‑140 (MQ=255)

                                                                                                                                   ttGGGGTCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAg  >  1:1068435/1‑140 (MQ=255)

CGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCACGATACCCAGCTCTTTTTCTGGAATAAACGCGACATAGCTACCAAATCCGCCGGTCGCCCCTGTTTTATGTACCCATGATGCGCGTACTGCAGGAGTTGGGGGCGTAATCGCTTTTACGGGGCGTGCTGCCAGTGCAATTTTATTGTCACTGCCGTTAATGATGCTGTCAGGATTTACCGGCCAGTCCAGCATTTCCCAGCCCAGGCCCTGATACATATCGCCGGTTTGCCAGTAG  >  NC_000913/4377853‑4378123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`