Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 697,054 (A)7→6 intergenic (‑7/+3) leuW ← / ← metT tRNA‑Leu/tRNA‑Met

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913697,0480A.100.0% 682.2 / NA 163intergenic (‑1/+9)leuW/metTtRNA‑Leu/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (67/96);  total (67/96)

Only 100 of 178 total aligned reads displayed.

CGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGT  >  NC_000913/696912‑697182
                                                                                                                                        |                                                                                                                                      
cGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaa                                                                                                                                     >  2:879875/1‑140 (MQ=255)
cGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTAGTGCGTCTACCAATTTCGCCACTCCCGCaaaa                                                                                                                                     >  1:42725/1‑140 (MQ=255)
  gTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaa                                                                                                                                   >  2:1372261/1‑140 (MQ=255)
  gTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaa                                                                                                                                   >  1:418774/1‑140 (MQ=255)
  gTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaa                                                                                                                                   >  2:2732248/1‑140 (MQ=255)
  gTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaa                                                                                                                                   >  2:2687905/1‑140 (MQ=255)
  gTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaa                                                                                                                                   >  2:1347647/1‑140 (MQ=255)
   tGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaag                                                                                                                                  >  1:1859600/1‑139 (MQ=255)
        tACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGAtggt                                                                                                                            <  2:2171195/140‑1 (MQ=255)
          ccGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGAtggtgg                                                                                                                          >  2:47768/1‑140 (MQ=255)
               tGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCaaaaaagatg                                                                                                                               <  1:1113003/131‑5 (MQ=255)
                ggCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTacga                                                                                                                    <  1:2687905/140‑1 (MQ=255)
                ggCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTacga                                                                                                                    <  1:2068849/140‑1 (MQ=255)
                ggCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGCCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTacga                                                                                                                    <  2:1120904/140‑1 (MQ=255)
                  cGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTacgacg                                                                                                                  <  1:879875/140‑1 (MQ=255)
                  cGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTacgacg                                                                                                                  <  1:302498/140‑1 (MQ=255)
                        cccATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCTGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTc                                                                                                            >  2:2554476/1‑140 (MQ=255)
                         ccATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCg                                                                                                           <  1:22296/140‑1 (MQ=255)
                          cATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGa                                                                                                          >  2:2473821/1‑140 (MQ=255)
                          cATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGa                                                                                                          >  2:2105178/1‑140 (MQ=255)
                            tCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAAc                                                                                                        >  1:284721/1‑140 (MQ=255)
                            tCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAAc                                                                                                        >  2:2263541/1‑140 (MQ=255)
                            tCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAAc                                                                                                        >  1:1453139/1‑140 (MQ=255)
                               gTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCtg                                                                                                     >  2:2763206/1‑140 (MQ=255)
                               gTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCtg                                                                                                     >  1:2656409/1‑140 (MQ=255)
                                tACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCtgt                                                                                                    <  1:841770/140‑1 (MQ=255)
                                tACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCtgt                                                                                                    <  1:634433/140‑1 (MQ=255)
                                 aCAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCg                                                                                                           <  1:904256/132‑1 (MQ=255)
                                 aCAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCg                                                                                                           >  2:904256/1‑132 (MQ=255)
                                 aCAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCtgtg                                                                                                   >  2:751050/1‑140 (MQ=255)
                                  cAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGa                                                                                                  <  2:1615860/140‑1 (MQ=255)
                                  cAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGa                                                                                                  <  2:2894196/140‑1 (MQ=255)
                                  cAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGa                                                                                                  <  2:342998/140‑1 (MQ=255)
                                  cAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGa                                                                                                  <  2:410269/140‑1 (MQ=255)
                                   aaCGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAc                                                                                                 <  2:954627/140‑1 (MQ=255)
                                   aaCGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAc                                                                                                 >  1:1929063/1‑140 (MQ=255)
                                    aCGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcc                                                                                                <  1:366442/140‑1 (MQ=255)
                                      gCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCTCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  2:1733592/140‑1 (MQ=255)
                                      gCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  2:2836000/140‑1 (MQ=255)
                                      gCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  2:120097/140‑1 (MQ=255)
                                      gCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  1:2003362/140‑1 (MQ=255)
                                      gCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  2:1929063/140‑1 (MQ=255)
                                      gCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  1:1059428/140‑1 (MQ=255)
                                       cTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCca                                                                                             <  2:479787/140‑1 (MQ=255)
                                       cTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCca                                                                                             <  1:97409/140‑1 (MQ=255)
                                         ttCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCcatc                                                                                           >  2:529012/1‑140 (MQ=255)
                                          tCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  2:342483/136‑1 (MQ=255)
                                          tCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  1:1635620/136‑1 (MQ=255)
                                          tCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              >  1:342483/1‑136 (MQ=255)
                                           cTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCcatcat                                                                                         <  1:2874809/140‑1 (MQ=255)
                                               tGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              <  1:2648398/131‑1 (MQ=255)
                                               tGAATGGTGCGGGAGGCGAGACTTGAACGCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              >  2:2648398/1‑131 (MQ=255)
                                                     gTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAt                                                                               <  1:273750/140‑1 (MQ=255)
                                                     gTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAt                                                                               <  1:2473821/140‑1 (MQ=255)
                                                      tGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGAcccc                                                                                              >  2:273990/1‑124 (MQ=255)
                                                      tGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCca                                                                                             <  2:1836543/125‑1 (MQ=255)
                                                      tGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtg                                                                              >  1:2275570/1‑140 (MQ=255)
                                                      tGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAt                                                                               <  1:1140904/139‑1 (MQ=255)
                                                      tGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAt                                                                               <  2:787279/139‑1 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            <  1:1018459/140‑1 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            >  1:1217679/1‑140 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            <  1:529012/140‑1 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            <  1:1942202/140‑1 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            >  2:230628/1‑140 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            <  1:2295795/140‑1 (MQ=255)
                                                        cGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            <  2:1777789/140‑1 (MQ=255)
                                                               cGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAAc                                                                     >  1:1341673/1‑140 (MQ=255)
                                                                gagaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgtg                                                                            <  2:1145080/132‑1 (MQ=255)
                                                                gagaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAt                                                                               <  2:1684902/129‑1 (MQ=255)
                                                                gagaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAAcc                                                                    <  1:2553950/140‑1 (MQ=255)
                                                                gagaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAAcc                                                                    >  2:668032/1‑140 (MQ=255)
                                                                gagaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAAcc                                                                    >  1:1474161/1‑140 (MQ=255)
                                                                gagaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCACAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAAcc                                                                    >  2:422147/1‑140 (MQ=255)
                                                                 agaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCa                                                                   <  1:1372261/140‑1 (MQ=255)
                                                                  gaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCaa                                                                  <  1:2763206/140‑1 (MQ=255)
                                                                  gaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCaa                                                                  <  2:2653268/140‑1 (MQ=255)
                                                                  gaCTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCaa                                                                  <  1:1735899/140‑1 (MQ=255)
                                                                       gAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAg                                                             >  1:1263449/1‑140 (MQ=255)
                                                                        aaCTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGct                                                                          <  1:1448791/126‑1 (MQ=255)
                                                                        aaCTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGct                                                                          >  2:1448791/1‑126 (MQ=255)
                                                                                  ccTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCa                                                  <  2:1324115/140‑1 (MQ=255)
                                                                                    ttGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATc                                                >  2:2132523/1‑140 (MQ=255)
                                                                                                 aCCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGa                                   <  1:1189733/140‑1 (MQ=255)
                                                                                                           ggTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCg                         >  1:2543336/1‑140 (MQ=255)
                                                                                                           ggTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCg                         >  2:677286/1‑140 (MQ=255)
                                                                                                            gTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCgg                        >  2:2348885/1‑140 (MQ=255)
                                                                                                             tGCGTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGc                       >  2:229793/1‑140 (MQ=255)
                                                                                                                gTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGtt                    <  1:1831578/140‑1 (MQ=255)
                                                                                                                gTCTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGtt                    <  1:2719446/140‑1 (MQ=255)
                                                                                                                  cTACCAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGc                  >  1:59271/1‑140 (MQ=255)
                                                                                                                     ccAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCggg               <  1:668032/140‑1 (MQ=255)
                                                                                                                      cAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgggg              <  1:751050/140‑1 (MQ=255)
                                                                                                                      cAATTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgggg              <  2:110994/140‑1 (MQ=255)
                                                                                                                       aaTTTCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGgc             <  1:1461456/140‑1 (MQ=255)
                                                                                                                           tCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt         <  1:2132523/140‑1 (MQ=255)
                                                                                                                           tCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt         <  2:1470838/140‑1 (MQ=255)
                                                                                                                           tCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt         <  2:1178812/140‑1 (MQ=255)
                                                                                                                           tCGCCACTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt         <  1:2132967/140‑1 (MQ=255)
                                                                                                                                 cTCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCg   >  2:2824613/1‑140 (MQ=255)
                                                                                                                                  tCCCGCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGGCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGt  >  1:1576218/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                      
CGGTGCCTTACCGCTTGGCGATACCCCATCCGTACAACGCTTTCTGGTGAATGGTGCGGGAGGCGAGACTTGAACTCGCACACCTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGT  >  NC_000913/696912‑697182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: