Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4350CT28.2% 181.8 / 55.4 103intergenic (‑179/‑28)ttdR/ttdADNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (6/68);  new base T (29/0);  total (35/68)
Fisher's exact test for biased strand distribution p-value = 4.79e-20
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 121 total aligned reads displayed.

GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA  >  NC_000913/3206296‑3206574
                                                                                                                                             |                                                                                                                                            
  aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCa                                                                                                                                            >  2:853121/1‑140 (MQ=255)
  aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCa                                                                                                                                            <  1:872638/140‑1 (MQ=255)
      cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACa                                                                                                                                        <  2:925745/140‑1 (MQ=255)
         tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAAt                                                                                                                                     >  1:310850/1‑140 (MQ=255)
           ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATAc                                                                                                                                   <  2:676901/140‑1 (MQ=255)
              ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTTAGACAAAAACaaa                                                                                                                                >  2:1771562/1‑140 (MQ=255)
               tCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACaaaa                                                                                                                               <  2:568228/140‑1 (MQ=255)
                cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAATACaaaaa                                                                                                                              >  1:2503792/1‑140 (MQ=255)
                cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACaaaaa                                                                                                                              >  1:326237/1‑140 (MQ=255)
                cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCAAGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAg                                                                                                                                           >  2:1886533/1‑127 (MQ=255)
                cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCAAGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAg                                                                                                                                           <  1:1886533/127‑1 (MQ=255)
                     ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGAACAAAAAAAAAACAggg                                                                                                                         >  2:2390633/1‑139 (MQ=255)
                     ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGa                                                                                                                         <  1:603009/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                        <  1:668664/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                        <  1:1428009/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                        <  1:2331050/140‑1 (MQ=255)
                      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                        <  1:2390633/140‑1 (MQ=255)
                      cagggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                        <  1:1899519/137‑1 (MQ=255)
                         ggCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTG‑AATTTTT‑CTCACAAATAAAAAAAAAGGAGttt                                                                                                                     >  2:2183734/1‑139 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAACAAAAAAAGAAGTTgg                                                                                                                    >  2:1424877/1‑139 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAAAGGAGGTgg                                                                                                                    >  2:1162975/1‑139 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGc                                                                                                                    <  1:1530160/140‑1 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AAATTTTTCAGACAAAAAAAAAAAATGGAGGTgg                                                                                                                    >  2:1950658/1‑139 (MQ=255)
                          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AAATTTTTCAAACAAAAAAAAAAAAAGGAGGTgg                                                                                                                    >  2:1530160/1‑139 (MQ=255)
                             cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑GATTTTTTCACACAAAAAAAAAAAAAGGAGTTGccct                                                                                                                 >  2:2772626/1‑138 (MQ=255)
                              aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatg                                                                                                                <  1:397010/140‑1 (MQ=255)
                              aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatg                                                                                                                <  2:326237/140‑1 (MQ=255)
                               atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGAGTTGCCctga                                                                                                               >  1:2103985/1‑140 (MQ=255)
                                tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACGTATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TT‑GATTTTTTCCGAAAAAAAAAAAAAATGGAGGTGTCatggt                                                                                                              >  2:2331050/1‑138 (MQ=255)
                                   tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAg                                                                                                          <  1:2146549/140‑1 (MQ=255)
                                   tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAg                                                                                                          <  1:853121/140‑1 (MQ=255)
                                    cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGAGTTGCCCTGAT‑GAgg                                                                                                         >  2:1780858/1‑139 (MQ=255)
                                     attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCACACAAAAACAAAAAAAGGAGATGCCATGAT‑GAGCg                                                                                                        >  1:2855560/1‑140 (MQ=255)
                                     attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGA‑TG‑AATTTTTCCAGACAAATACAAAAACT‑GAGTTGCCATGAT‑GAg                                                                                                          <  2:832840/137‑1 (MQ=255)
                                     attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGA‑TG‑AATTTTTCCAGACAAATACAAAAACT‑GAGTTGCCATGAT‑GAg                                                                                                          >  1:832840/1‑137 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑GATTTTTTCAGAAAAAAACAAAAAATCGAGTTGGCATGAT‑GAGCGa                                                                                                       >  1:2368737/1‑140 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGa                                                                                                       <  2:1570324/140‑1 (MQ=255)
                                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGa                                                                                                       <  1:525882/140‑1 (MQ=255)
                                       tcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGaa                                                                                                      <  1:1614942/140‑1 (MQ=255)
                                       tcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGaa                                                                                                      <  2:2503792/140‑1 (MQ=255)
                                         ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAg                                                                                                    <  1:1950658/140‑1 (MQ=255)
                                          tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGG‑GG‑GG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGAT‑GAGCGAAAgga                                                                                                  >  1:1466192/1‑138 (MQ=255)
                                            ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AAATTTTTCTAAGAAAAAAAAAAAAAGGAGGTTTCGTGAT‑GAGGGaaaaaaa                                                                                                 >  2:701628/1‑136 (MQ=255)
                                             tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGtaat                                                                                                <  1:860447/140‑1 (MQ=255)
                                               tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGtaataa                                                                                              <  2:310850/140‑1 (MQ=255)
                                                 gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTTCGACAAAAACAAAAAATGGGGGTGCCCTGAT‑GAGGGAAAGgaataaaa                                                                                            >  2:1614942/1‑138 (MQ=255)
                                                 gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCATACAAATACAAAAAATGGAGTTGCCATGAT‑GAGAGAAAGtaataaaa                                                                                            >  2:1616565/1‑138 (MQ=255)
                                                 gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGAT‑GAGCGAAAGtaaaaaaa                                                                                            >  2:2487648/1‑138 (MQ=255)
                                                   gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCaa                                                                                          <  1:1762816/140‑1 (MQ=255)
                                                   caggATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCaa                                                                                          <  1:299029/137‑1 (MQ=255)
                                                    ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAAc                                                                                         <  1:2774692/140‑1 (MQ=255)
                                                     tGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACa                                                                                        <  2:1488364/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  1:1093277/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  1:1616565/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  2:1180070/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  2:1195224/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  2:2463492/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  2:2245656/140‑1 (MQ=255)
                                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAgg                                                                                      <  1:1162975/140‑1 (MQ=255)
                                                        ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGc                                                                                     <  1:1257877/140‑1 (MQ=255)
                                                              aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                               <  1:1254677/140‑1 (MQ=255)
                                                              aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                               <  1:2828207/140‑1 (MQ=255)
                                                                  gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                           <  1:213515/140‑1 (MQ=255)
                                                                   ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTTTCCA‑AAAAAAAAAAAAACTGGAGTTGACATTAT‑GAAAGGAAGAAAAAAAGAACAGCCAGGGAATAAga                                                                          >  2:213515/1‑139 (MQ=255)
                                                                       ttACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGAc                                                                      <  1:1914251/140‑1 (MQ=255)
                                                                           atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAAAGGAGGTGGCATGAT‑GAGGGGAAAGAAAAAACAAAAAGCAATGAAAAAAGTGACaaaa                                                                  >  2:2630768/1‑137 (MQ=255)
                                                                           atatTCACGGTGACAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCCAACAAAAAAAAAAAATGGAGTTGTCCTGAT‑GAGGGGAAGTAATAAACAAAAAGGAGAGAAAAAGATgagagaa                                                                  >  2:612674/1‑139 (MQ=255)
                                                                            tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                 <  1:2684978/140‑1 (MQ=255)
                                                                            tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                 <  1:518853/140‑1 (MQ=255)
                                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTTAGACAAAAAAAAAAAATGGAGTTGCCATGAT‑GAGCGAAAATAAAAAAAAACAAGCAATGAAAAAGTTGACAGAGAt                                                                >  2:1603863/1‑140 (MQ=255)
                                                                                  cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCg                                                           <  1:2727482/140‑1 (MQ=255)
                                                                                     tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGGGGTGGCCTGAT‑GAGCGAAAGAAATAAACAAAAAGCAGTGAAAAAAATGACAGAGATTGTCGCTa                                                        >  2:875813/1‑140 (MQ=255)
                                                                                     tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AAATTTTTCAAACAAAAAAAAAAAAAGGAGTTGCCCTGAT‑GAGGGAAAGGAAAAAACAACAAGCAGGGGAAAAATTGACAGAGGTTGTTGCTa                                                        >  2:2727482/1‑140 (MQ=255)
                                                                                      ggCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGAGTTGCCATGAT‑GAGCGAAAATAAAAAACAAAAAGCAGTGAATAAAATGACAGAGAATGTCGCTaa                                                       >  2:2725209/1‑140 (MQ=255)
                                                                                       gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑GATTTTTTCAGACAAAAACAAAAAATGGAGGTGGCATGAT‑GAGGGAAAGTAAAAAAAAAAAAGCAGGGAATAAATTGACAGAGAATGTCGCTaaa                                                      >  2:1049218/1‑139 (MQ=255)
                                                                                         aaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACtt                                                    <  1:2630768/140‑1 (MQ=255)
                                                                                                 taAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAACAAAA‑‑TGGGGTTTCCATGAT‑GAGCGGAAGGAAAAAAGAACAAGCAGGGAATAAAGTGACAGAGATTGTTGCTAAATTTTCCGCCCTg                                          >  2:347737/1‑140 (MQ=255)
                                                                                                     aCCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGAt                                        <  1:2538390/140‑1 (MQ=255)
                                                                                                         caTTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAACAAAAAATGGAGTTGCCATGAT‑GAGCGAAAGTAATAAACAAAAAGCAGGGAATAAATTGACAGAGAATGTCGCTAACTTTACCGCCATGAttttt                                    >  2:1487143/1‑138 (MQ=255)
                                                                                                         caTTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGAGGTGCCATGAT‑GAGGGAAAGGAAAAAACAACAAGCAGTGAATAAATTGACAGAGAATTTTGCTAAATTTACCCCCATGAttttt                                    >  2:1634249/1‑138 (MQ=255)
                                                                                                         caTTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCAAGAAAAATACAAAAACTGGAGTTCCCATGAT‑GAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCt                                    <  2:645919/140‑1 (MQ=255)
                                                                                                         acagtttAGTGGTAGTTTGTGGCGG‑TG‑AATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCt                                    <  1:1475539/136‑1 (MQ=255)
                                                                                                          aTTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGGGTTGGCATGAT‑GAGCGGAAGGAATAAACAACAAGGAGGGAATAAATTGACAGAGATTGTTGCTAAATTTTCCGCCCTGAtttttt                                   >  2:2508684/1‑137 (MQ=255)
                                                                                                          aTTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTTCAGAAAAAAAAAAAAAATGGAGGTGCCATGAT‑GAGGGGAAGAAAAAAAAAAAAAGCAGAGAAAAAAATGACAAAGATTGTTGCTAAATTTTTCGCCCAGATTTCtt                                   >  2:1767435/1‑139 (MQ=255)
                                                                                                              ttAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCg                               <  1:1487143/140‑1 (MQ=255)
                                                                                                               tAGTGGTAGTTTGTGGCGG‑TG‑ATTTTTTCCAGACAAATAC‑‑AAACTGGAGTTCCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                            <  1:347737/140‑1 (MQ=255)
                                                                                                               tAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                              <  1:1780858/140‑1 (MQ=255)
                                                                                                                 gTGGTAGTTTGTGGCGG‑TG‑GATTTTTTCCGACAAAAAAAAAAAATGGGGGTGGCATGAT‑TAGCGGAAAGAAAAAAAAAAAAGCAGGGAATAAAATGACAGAGAATGTTGCTAACTTTACCGCCCTGATTTTTTCCCCaaa                            >  2:2801503/1‑139 (MQ=255)
                                                                                                                 gTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                            <  1:1712145/140‑1 (MQ=255)
                                                                                                                 gTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                            <  1:2629218/140‑1 (MQ=255)
                                                                                                                 gTGGTAGCTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAAt                            <  1:2423845/140‑1 (MQ=255)
                                                                                                                      aGTTTGTGGCGG‑TG‑AATTTTTTCAGACAAAAAAAAAAAATGGGGGTGCCATGAT‑GAGGGAAAGTAAAAAAAAACAGGCAGGGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTTTACCCCAATGcccg                       >  2:1230264/1‑138 (MQ=255)
                                                                                                                         ttGTGGCGG‑TG‑ATTTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  1:1230264/140‑1 (MQ=255)
                                                                                                                         ttGTGGCGG‑TG‑AATTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGACAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  1:2053900/140‑1 (MQ=255)
                                                                                                                         ttGTGGCGG‑TG‑AATTTTCCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  1:934158/140‑1 (MQ=255)
                                                                                                                             ggggg‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGACTAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt                <  1:2801503/137‑1 (MQ=255)
                                                                                                                              gagg‑TG‑ATTTTTTCCAAACAAAAAAAAAATTTGGA‑TTGGCGTAATGGAGGAAAAATAATAACCACAAGTTAGTAAATAAGTTGACAGAGCTTTGCCCTAGCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg               <  2:483407/138‑1 (MQ=255)
                                                                                                                              gCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg               <  1:1634249/140‑1 (MQ=255)
                                                                                                                                 g‑TG‑AATTTTTTCCGACAAATAAAAAAAATGGAGGTGCCATTAT‑GAGGGGAAGTAATAAGCAACAGGCAGGGAAAAAGTTGACAGAGATTGTCGCCAAATTTTCCGCCATGATTTTTACCCCAATGGCCGGTGACgggggg            >  2:342085/1‑138 (MQ=255)
                                                                                                                                     aaaTTTTTCCAGACAAATACAAAAACGGGAGTTGCCATGAT‑GAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:2657125/139‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                            
GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TG‑AATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGAT‑GAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA  >  NC_000913/3206296‑3206574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑