| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 345,403 | G→T | intergenic (+412/‑1) | yahL → / → yahM | uncharacterized protein YahL/uncharacterized protein YahM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 345,403 | 0 | G | T | 99.0% | 719.3 / ‑1.3 | 201 | intergenic (+412/‑1) | yahL/yahM | uncharacterized protein YahL/uncharacterized protein YahM |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (99/100); total (100/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 201 total aligned reads displayed.
TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAGGGGAGAGTGGG > NC_000913/345266‑345538 | tCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTAt > 2:636388/1‑140 (MQ=255) tttttCTGTATCTTACGCACCGCACTAAAGCCAAAAAAAAAATATGTTGAAAGGC‑TAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATg < 2:1126549/139‑1 (MQ=255) tttCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGc > 1:2649675/1‑140 (MQ=255) tttCTGTATCTTACGCATCACACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGc > 1:1652134/1‑140 (MQ=255) tATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCa > 2:2623819/1‑140 (MQ=255) aTCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCaa > 2:1302484/1‑140 (MQ=255) aTCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCaa > 1:1540626/1‑140 (MQ=255) tCTTCCCCATCCCACTCAAGCCTGAAAAAAAATATGCTGAAAGCC‑TCATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAAc < 2:2649675/140‑1 (MQ=255) tACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTcctgtctc > 1:2378964/1‑134 (MQ=255) tACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACttt > 1:2615319/1‑140 (MQ=255) aTCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCaaa > 1:1789116/1‑140 (MQ=255) cGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCaaaaa > 2:2188891/1‑139 (MQ=255) cGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAAc > 1:1874541/1‑140 (MQ=255) cGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAAc > 1:46009/1‑140 (MQ=255) cGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAAc > 1:274473/1‑140 (MQ=255) cGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAAc > 1:578549/1‑140 (MQ=255) gCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAAct > 1:1003361/1‑140 (MQ=255) aCTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAActct > 1:2341395/1‑140 (MQ=255) cAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACtcttct > 1:169050/1‑140 (MQ=255) aaGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTg < 1:1302484/140‑1 (MQ=255) gACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAg > 2:2858438/1‑140 (MQ=255) aCAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGa < 1:1821086/140‑1 (MQ=255) aCAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGa < 1:1850589/140‑1 (MQ=255) aCAAAAAATTTGCTGTAAGCT‑TCATAACAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGa < 1:330103/140‑1 (MQ=255) aCAAAAAATTTGCTGAAAGGC‑TAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGa < 2:386707/140‑1 (MQ=255) cAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGAt > 2:1714596/1‑140 (MQ=255) cAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGAt < 1:876862/140‑1 (MQ=255) aaGAAAATATGCTAAAAGGA‑CCATAACAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGAt < 2:1652134/139‑1 (MQ=255) aaaaatTATGCTGAAAGAC‑AAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATc < 2:672357/138‑1 (MQ=255) aaaaaaTATGTTGAAAGTC‑TAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATc < 2:2172703/138‑1 (MQ=255) aaaaaaTATGGTAAAAGAC‑TCATAACAAAACCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATc < 2:46009/138‑1 (MQ=255) aaaaaaTATGCTTTAAGGC‑TAAAATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATc < 1:1478364/138‑1 (MQ=255) aGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATc < 2:2681189/140‑1 (MQ=255) gAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATcc < 1:2679227/140‑1 (MQ=255) aaaTTTGCTGTAGGCC‑TCATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATcccc < 2:1586773/140‑1 (MQ=255) aaaTATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATcccc > 1:2496196/1‑140 (MQ=255) aaaTATGCTG‑AAGGCTTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATcccc < 2:1740675/140‑1 (MQ=255) atatGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCtt < 1:636388/140‑1 (MQ=255) atatGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCtt < 1:2164163/140‑1 (MQ=255) tGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGa > 2:892390/1‑130 (MQ=255) ttGTAGGGC‑TAATAAAAAAATCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTtattat < 2:578549/139‑1 (MQ=255) tAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatcat > 1:1740675/1‑140 (MQ=255) aaGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatcatc > 1:481768/1‑140 (MQ=255) atatCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCaa > 1:2334098/1‑140 (MQ=255) atcaaaaCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGt > 1:1345706/4‑140 (MQ=255) aaaaCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTgg < 2:327557/139‑1 (MQ=255) aaaaCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGa > 2:504364/1‑140 (MQ=255) aaaaCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGa > 1:2265771/1‑140 (MQ=255) aaaCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGaa > 2:1709964/1‑140 (MQ=255) aaaCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGaa < 2:2496196/140‑1 (MQ=255) aCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACa < 1:2530339/140‑1 (MQ=255) gCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCa < 2:76211/127‑1 (MQ=255) ccATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGt < 2:540602/130‑1 (MQ=255) ccATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGt > 1:540602/1‑130 (MQ=255) ccATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGc < 1:95490/140‑1 (MQ=255) tcatcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGttt < 2:188096/140‑1 (MQ=255) tcatcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGttt < 1:2703587/140‑1 (MQ=255) atcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTgg < 1:322386/140‑1 (MQ=255) atcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTgg < 2:2615319/140‑1 (MQ=255) atcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTgg < 2:1003361/140‑1 (MQ=255) tcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCCTTGTTTGGc > 1:2019819/1‑140 (MQ=255) tcaGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGc > 1:2633767/1‑140 (MQ=255) aGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACCCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTa > 1:2099751/1‑140 (MQ=255) gAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTAtt < 1:1714596/140‑1 (MQ=255) agagCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCa > 1:2577424/1‑140 (MQ=255) gCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa < 1:2080573/140‑1 (MQ=255) gCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa > 1:2033583/1‑140 (MQ=255) gCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa > 1:653368/1‑140 (MQ=255) gCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa < 2:1526602/140‑1 (MQ=255) gCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa > 1:920521/1‑140 (MQ=255) cAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa < 1:2185360/139‑1 (MQ=255) aGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATg > 2:1645713/1‑140 (MQ=255) gacgacAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGc < 1:777558/128‑1 (MQ=255) cgacAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATgggg > 1:2659721/1‑140 (MQ=255) gacAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa < 2:1418715/134‑1 (MQ=255) gacAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa > 1:1418715/1‑134 (MQ=255) acAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCa < 2:2521714/140‑1 (MQ=255) aaCCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGa > 1:2248338/1‑131 (MQ=255) aaCCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATgggg < 2:2336155/136‑1 (MQ=255) aaCCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGa < 2:2659721/140‑1 (MQ=255) aGGATTGTTGTATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCaa < 2:424951/140‑1 (MQ=255) tgttgtATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGaaa > 1:1162676/1‑140 (MQ=255) ttgtATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCa < 1:389033/127‑1 (MQ=255) ttgtATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGaaaaa < 2:2577424/140‑1 (MQ=255) tATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc < 1:1645713/140‑1 (MQ=255) tATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc < 2:2265771/140‑1 (MQ=255) tATGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc < 2:2033583/140‑1 (MQ=255) tGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCa < 2:186046/122‑1 (MQ=255) tGGTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGccc > 2:1795928/1‑140 (MQ=255) gTACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCcac < 1:1709964/140‑1 (MQ=255) tACGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTACAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCcaca < 1:2858438/140‑1 (MQ=255) cGGGGTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCcacaca > 2:827232/1‑140 (MQ=255) gggTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAgg < 2:2019819/140‑1 (MQ=255) gggTTCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAgg < 2:2085040/140‑1 (MQ=255) ttCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc < 2:2157934/128‑1 (MQ=255) tCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc < 1:1182253/127‑1 (MQ=255) tCGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAGGGgag > 1:687786/1‑140 (MQ=255) cGAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAGGGgaga < 2:1832822/140‑1 (MQ=255) gAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc < 2:1023339/125‑1 (MQ=255) gAGGCCTCTATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGc > 1:1023339/1‑125 (MQ=255) | TCTTTTCTGTATCTTACGCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGGC‑TCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAGGGGAGAGTGGG > NC_000913/345266‑345538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |