Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,589,124 C→A G510G (GGC→GGA)  acrD → multidrug efflux pump RND permease AcrD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,589,1240CA100.0% 471.7 / NA 134G510G (GGC→GGA) acrDmultidrug efflux pump RND permease AcrD
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (74/60);  total (74/60)

Only 100 of 134 total aligned reads displayed.

GCCATCTATCGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGTGTTCCTGTT  >  NC_000913/2588987‑2589258
                                                                                                                                         |                                                                                                                                      
gCCATCTATCGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGAtt                                                                                                                                      >  1:1481405/1‑140 (MQ=255)
      tATCGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGc                                                                                                                                <  1:150720/140‑1 (MQ=255)
         cGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTg                                                                                                                             >  2:1851298/1‑140 (MQ=255)
         cGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTg                                                                                                                             >  1:856993/1‑140 (MQ=255)
           ccAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGt                                                                                                                           >  1:808567/1‑140 (MQ=255)
             aGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGttt                                                                                                                         <  2:434548/140‑1 (MQ=255)
               ttCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTaa                                                                                                                       >  2:1455870/1‑140 (MQ=255)
                   ctATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAg                                                                                                                   <  2:2263308/140‑1 (MQ=255)
                    tATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGc                                                                                                                                <  2:1793584/126‑1 (MQ=255)
                    tATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGc                                                                                                                                >  1:1793584/1‑126 (MQ=255)
                         ccATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGttt                                                                                                             >  2:389432/1‑140 (MQ=255)
                         ccATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGttt                                                                                                             >  1:567449/1‑140 (MQ=255)
                           aTTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTaa                                                                                                           >  1:1490995/1‑140 (MQ=255)
                            ttgttgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAAcc                                                                                                                     >  1:1187330/1‑129 (MQ=255)
                            ttgttgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAAcc                                                                                                                     <  2:1187330/129‑1 (MQ=255)
                              gttgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCg                                                                                                        >  1:547854/1‑140 (MQ=255)
                              gttgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCg                                                                                                        >  2:1533017/1‑140 (MQ=255)
                              gttgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCg                                                                                                        >  1:722536/1‑140 (MQ=255)
                              gttgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCg                                                                                                        >  2:2239266/1‑140 (MQ=255)
                                tgCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCa                                                                                                      >  1:2299324/1‑140 (MQ=255)
                                 gcggcgATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAg                                                                                                                   <  1:1393893/126‑1 (MQ=255)
                                    gcgATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGc                                                                                                  >  2:469305/1‑140 (MQ=255)
                                        tGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGaa                                                                                              <  2:945593/140‑1 (MQ=255)
                                        tGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGaa                                                                                              <  2:2378396/140‑1 (MQ=255)
                                         ggTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAAc                                                                                             >  1:1664961/1‑140 (MQ=255)
                                         ggTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAAc                                                                                             >  2:1772933/1‑140 (MQ=255)
                                              tGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTAc                                                                                        <  1:873163/140‑1 (MQ=255)
                                                  aGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGaaa                                                                                    >  1:2041391/1‑140 (MQ=255)
                                                   gTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGaaaa                                                                                   <  1:1301074/140‑1 (MQ=255)
                                                    tACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGaaaaa                                                                                  >  1:2560534/1‑140 (MQ=255)
                                                     aCTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAg                                                                                 >  2:2088615/1‑140 (MQ=255)
                                                        ggTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAgggg                                                                              >  1:102014/1‑140 (MQ=255)
                                                         gTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGt                                                                             >  2:264206/1‑140 (MQ=255)
                                                            gCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGc                                                                          >  2:989652/1‑140 (MQ=255)
                                                            gCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGc                                                                          >  2:610687/1‑140 (MQ=255)
                                                            gCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGc                                                                          >  1:2443487/1‑140 (MQ=255)
                                                              gatgatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGGAAAAGGGGTGGCGa                                                                        >  2:1020390/1‑140 (MQ=255)
                                                              gatgatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATCTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGa                                                                        <  2:1998107/140‑1 (MQ=255)
                                                               atgatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGaa                                                                       >  2:741215/1‑140 (MQ=255)
                                                                tgatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACCGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGaaa                                                                      >  2:33870/1‑140 (MQ=255)
                                                                 gatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGaaaa                                                                     <  2:1664961/140‑1 (MQ=255)
                                                                   tCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAAtt                                                                   >  1:1621100/1‑140 (MQ=255)
                                                                     cTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATtct                                                                 <  1:741215/140‑1 (MQ=255)
                                                                     cTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATtct                                                                 <  1:1455870/140‑1 (MQ=255)
                                                                     cTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATtct                                                                 <  1:2525276/140‑1 (MQ=255)
                                                                     cTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATtct                                                                 <  1:469305/140‑1 (MQ=255)
                                                                        aCTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCa                                                              >  2:989146/1‑140 (MQ=255)
                                                                              gCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGGGCGGAAATTTCTCCACCgagc                                                        >  2:1478664/1‑137 (MQ=255)
                                                                               ctctGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGc                                                       <  2:567449/140‑1 (MQ=255)
                                                                               ctctGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGc                                                       <  1:2239266/140‑1 (MQ=255)
                                                                               ctctGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGc                                                       >  2:41573/1‑140 (MQ=255)
                                                                                 ctGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCt                                                     <  2:547854/140‑1 (MQ=255)
                                                                                 ctGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCt                                                     <  2:1966189/140‑1 (MQ=255)
                                                                                  tgtgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTg                                                    >  2:484675/1‑140 (MQ=255)
                                                                                   gtgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgc                                                   <  2:2560534/140‑1 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGTGAAAATTCTCCACCGTAGCCTgcg                                                  >  1:2461431/1‑140 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcg                                                  >  2:2435038/1‑140 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcg                                                  >  1:2159372/1‑140 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcg                                                  >  2:918824/1‑140 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcg                                                  <  1:53408/140‑1 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAAGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATCCTCCACCGTAGCCTgcg                                                  >  1:1166091/1‑140 (MQ=255)
                                                                                    tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAAGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATCCTCCACCGTAGCCTgcg                                                  <  2:1166091/140‑1 (MQ=255)
                                                                                      tgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt                                                <  1:989652/140‑1 (MQ=255)
                                                                                      tgCCACACTACTTAAGCCACCGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt                                                <  1:33870/140‑1 (MQ=255)
                                                                                        ccACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTgg                                              <  1:1533017/140‑1 (MQ=255)
                                                                                        ccACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTgg                                              >  2:2247511/1‑140 (MQ=255)
                                                                                         cacaCTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGa                                             >  2:1102673/1‑140 (MQ=255)
                                                                                         cacaCTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGa                                             >  1:356605/1‑140 (MQ=255)
                                                                                         cacaCTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGACTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCTCCGTAGCCTGCGCTGGa                                             <  2:1447415/140‑1 (MQ=255)
                                                                                           cacTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGAtt                                           <  1:2247511/140‑1 (MQ=255)
                                                                                            actactTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATtg                                          <  1:1851298/140‑1 (MQ=255)
                                                                                             ctactTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATtgt                                         <  2:2159372/140‑1 (MQ=255)
                                                                                             ctactTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATtgt                                         <  2:487556/140‑1 (MQ=255)
                                                                                                ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcg                                                  >  1:1966878/1‑128 (MQ=255)
                                                                                                ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcg                                                  <  2:1966878/128‑1 (MQ=255)
                                                                                                ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGAt                                      >  2:856388/1‑140 (MQ=255)
                                                                                                  tAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGAttt                                    >  1:2410966/1‑140 (MQ=255)
                                                                                                     gCCACTGAAAAAAGGTGAGCATCATGAGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATg                                 >  2:2264642/1‑140 (MQ=255)
                                                                                                        aCTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTcc                              >  2:759860/1‑140 (MQ=255)
                                                                                                        aCTGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTcc                              >  2:674098/1‑140 (MQ=255)
                                                                                                          tGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCctg                            >  2:1957503/1‑140 (MQ=255)
                                                                                                          tGAAAAAAGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCctg                            <  1:484675/140‑1 (MQ=255)
                                                                                                               aaaGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTgctgct                       <  2:102014/140‑1 (MQ=255)
                                                                                                                 aGGTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGTGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTg                     <  2:2461431/140‑1 (MQ=255)
                                                                                                                  ggTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTgg                    <  1:674098/140‑1 (MQ=255)
                                                                                                                  ggTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTgg                    <  2:2041391/140‑1 (MQ=255)
                                                                                                                  ggTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTgg                    <  2:2299324/140‑1 (MQ=255)
                                                                                                                   gTGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTggc                   >  1:1889133/1‑140 (MQ=255)
                                                                                                                    tGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTggcg                  <  1:2435038/140‑1 (MQ=255)
                                                                                                                    tGAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTggcg                  <  1:2330217/140‑1 (MQ=255)
                                                                                                                     gAGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTggcgg                 <  2:889407/140‑1 (MQ=255)
                                                                                                                      aGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTggcggc                >  2:1532795/1‑140 (MQ=255)
                                                                                                                      aGCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTggcggc                >  2:79026/1‑140 (MQ=255)
                                                                                                                       gCATCATGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCa               <  2:856993/140‑1 (MQ=255)
                                                                                                                         atcatGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATg             <  1:1992575/140‑1 (MQ=255)
                                                                                                                         atcatGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATg             <  1:989146/140‑1 (MQ=255)
                                                                                                                             tGGGCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATgg            >  1:983983/1‑137 (MQ=255)
                                                                                                                               ggCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGtgttc       <  1:380394/140‑1 (MQ=255)
                                                                                                                               ggCAAAAAGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGtgttc       <  1:463203/140‑1 (MQ=255)
                                                                                                                                    aaaGGATTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGtgttcctgtt  >  1:2267832/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                      
GCCATCTATCGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGTGTTCCTGTT  >  NC_000913/2588987‑2589258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑