Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913646,7470TG23.4% 259.5 / 51.1 112T255P (ACC→CCC) citGtriphosphoribosyl‑dephospho‑CoA synthase
Reads supporting (aligned to +/- strand):  ref base T (2/83);  new base G (26/0);  total (29/83)
Fisher's exact test for biased strand distribution p-value = 2.44e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 146 total aligned reads displayed.

AAATTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646608‑646886
                                                                                                                                           |                                                                                                                                             
aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGt                                                                                                                                               <  2:2523618/140‑1 (MQ=255)
aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGt                                                                                                                                               <  1:2240853/140‑1 (MQ=255)
aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGt                                                                                                                                               <  2:561428/140‑1 (MQ=255)
  aTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTc                                                                                                                                             <  2:2172573/140‑1 (MQ=255)
      aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAt                                                                                                                                        >  1:1944843/1‑140 (MQ=255)
        cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑Gc                                                                                                                                     <  1:1281892/140‑1 (MQ=255)
        cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑Gc                                                                                                                                     >  2:424907/1‑140 (MQ=255)
        cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑Gc                                                                                                                                     <  2:2041263/140‑1 (MQ=255)
         aaGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑Gcc                                                                                                                                    <  2:589901/140‑1 (MQ=255)
             gCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGGGATAATCGAGATCGGCGGGGGGTTG‑GAT‑Ggccccc                                                                                                                                >  2:130805/1‑139 (MQ=255)
              cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑GAT‑Ggccccct                                                                                                                               >  2:2684416/1‑138 (MQ=255)
              cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑CAT‑ccccccct                                                                                                                               >  2:1950414/1‑138 (MQ=255)
              cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAACACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑Gcccccct                                                                                                                               >  2:2525190/1‑138 (MQ=255)
               ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCttt                                                                                                                              <  1:605993/140‑1 (MQ=255)
                  acagatTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTg                                                                                                                           <  1:315501/136‑1 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCaat                                                                                                                       <  1:549969/140‑1 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCaat                                                                                                                       <  1:1396354/140‑1 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCTTTTTTCaat                                                                                                                       >  2:2691908/1‑140 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCctttttttat                                                                                                                       >  2:396418/1‑135 (MQ=255)
                               gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTTAATAAAGttttt                                                                                                              >  2:1828337/1‑138 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑GAT‑GGCCCCCTTTTTCAAAAATTTTTtcg                                                                                                             >  2:1816368/1‑140 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAA‑ACCCCCCTTTTTCAATAATTTTTtcg                                                                                                             >  2:1653625/1‑140 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCCTTTTTCTATAATttttttt                                                                                                             >  2:1700008/1‑137 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCCTTTTTCAATAATGTTTtcg                                                                                                             >  1:274748/1‑140 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCCTTTTTCAATAAAGTTTtcg                                                                                                             >  1:2668075/1‑140 (MQ=255)
                                 gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AGT‑GCCCCCTTTTTGCAATAAAGttttctc                                                                                                            >  2:1066981/1‑136 (MQ=255)
                                 gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCCTTTTTCTATAAAGTTTtcgc                                                                                                            >  2:2817511/1‑140 (MQ=255)
                                 gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAAG‑GCCCCCTTTTTTC‑ATAATCtttttgc                                                                                                            >  1:2694542/1‑136 (MQ=255)
                                  cTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGcc                                                                                                           <  1:238478/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:2290432/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:1768049/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:785201/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:3109920/140‑1 (MQ=255)
                                       aaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTcgcg                                                                                                      <  2:3136835/140‑1 (MQ=255)
                                         ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  1:1066981/140‑1 (MQ=255)
                                         ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  1:1368618/140‑1 (MQ=255)
                                         ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  1:1250266/140‑1 (MQ=255)
                                          cAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑CAT‑GCCCCCCTTTTTCTATAATATTTTTGCCTCccgccg                                                                                                   >  2:263420/1‑138 (MQ=255)
                                             gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GATGGCCCCCTTTTTTAAAAAAT‑TTTGTGCCTCGCGCTGTAg                                                                                                >  2:2868134/1‑140 (MQ=255)
                                             gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTACCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCCCGCCGttg                                                                                                >  2:2896122/1‑138 (MQ=255)
                                                  cagcAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgc                                                                                           <  1:2026901/137‑1 (MQ=255)
                                                   aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACCCTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgcg                                                                                          <  2:2182775/140‑1 (MQ=255)
                                                   aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑GGCCCCCTTTTTTAATAAAGTTTTTGCCCCGCGCCGTAGCCcgcg                                                                                          >  1:2100546/1‑140 (MQ=255)
                                                     cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCa                                                                                        <  1:2835342/140‑1 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAgg                                                                                      <  1:1082178/140‑1 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCCTTTTTTAATAATGTTTTCGCCTCCCGCTGTAGCCAGCGCCgg                                                                                      >  1:83273/1‑140 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGGCG‑GAT‑GGCCCCCTTTTTTTCTAATTTTTTGTCCTCCCGCCGTGGCCCGCGCAgg                                                                                      >  2:1576541/1‑140 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGCGGGTGG‑AAG‑GGCCCCCTTTTGTAATAATTTTTGTCCCCCCCGCGGTAGCCatccgcag                                                                                      >  2:2134802/1‑133 (MQ=255)
                                                             cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCCTTTTTTAATAATGTTTTCGCCCCCCGCTGTAGCCCGCGCCGGcccccc                                                                                >  2:2461444/1‑140 (MQ=255)
                                                              ggCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCt                                                                               <  1:1562879/139‑1 (MQ=255)
                                                              aGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGTGGGTCG‑GAC‑GACCCCCTTTTTTGATAAATTTTGTGCCCCCCGCTGTGTCCCACGCCGGgcccccc                                                                               >  2:73864/1‑139 (MQ=255)
                                                              aGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCCTTTTTTAATAATGTTTTTGCCCCCCCCCGTAGCCCGCGCAGGccccccc                                                                               >  2:782948/1‑139 (MQ=255)
                                                              aGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTCCATAATGTTTTTGCCCCCCGCTGTAGCCCGCGCCGGccccccc                                                                               >  2:1062982/1‑139 (MQ=255)
                                                                cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCCGTAGCCCGGGCCGGccccccccc                                                                             >  2:2083670/1‑137 (MQ=255)
                                                                   tGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCa                                                                          <  1:2691908/140‑1 (MQ=255)
                                                                      cgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcg                                                                       <  1:1996092/140‑1 (MQ=255)
                                                                       gccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTCCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgc                                                                      <  1:2983094/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCTCCTCGCCACcgcg                                                                     <  1:1494618/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:1576541/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:1653625/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:2817511/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:441103/140‑1 (MQ=255)
                                                                          tGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑GAT‑GCCCCCCTTTTTCTATAATATTTTTGCCCCCCCCCGTTGCCAGCGCCGGCCCCCCCCCCCCCcccgcc                                                                   >  2:1494618/1‑139 (MQ=255)
                                                                           ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGa                                                                  <  1:263420/140‑1 (MQ=255)
                                                                           ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGa                                                                  <  1:141006/140‑1 (MQ=255)
                                                                            gACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGAt                                                                 <  1:1950414/140‑1 (MQ=255)
                                                                             aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGG‑CCCCCTCGCCACCGCGCGATGc                                                               <  1:2134802/140‑1 (MQ=255)
                                                                             aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCCTTTTTTAATAATTTTTTTGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGATg                                                                >  2:1278026/1‑140 (MQ=255)
                                                                              cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGc                                                               <  1:1828337/140‑1 (MQ=255)
                                                                              cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGc                                                               <  1:1964263/140‑1 (MQ=255)
                                                                                  gaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGG‑TCG‑AAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCACCCCGCGATGCAACGt                                                          >  1:999556/1‑140 (MQ=255)
                                                                                      tcgttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTgg                                                       <  1:1700008/140‑1 (MQ=255)
                                                                                       cgttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑CAT‑GCCCCCCTTTTTTAATAATGTTTTCGCCCCCCGCTGTAGCCCGCGCAGGCCCCCCCCCCCCCCCCGCGATGCCACGTTggg                                                      >  2:90767/1‑139 (MQ=255)
                                                                                         ttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTAt                                                    <  2:1944843/140‑1 (MQ=255)
                                                                                                      cTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCCCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCGCGCTGCCAAGGTGGGATCGCCCGTGGTCGc                                       >  2:2220977/1‑140 (MQ=255)
                                                                                                       tGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc                                      <  1:2220977/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  1:2749269/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  1:2597499/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  2:1675609/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCCTTTTTTAATAATGTTTTTGCCCCCCGCCGTAGCCCGCGCAGGCCCCCCCCCCCCCCCCCCGGCGCCACGGTGGTATCGCCGCTGATCGccc                                     >  2:2740248/1‑139 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTCAATAATGTTTTTGCCCCCCCCTGTAGGCAGCGCCAGCCCCCCCCCCCCCCCCCCGATGCCACGGTGGGATCGCCGGTGATTGccc                                     >  2:2732964/1‑139 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCTTTTTTCAATAATGTTTTCGCCTCCCGCTGTAGCCAGCGCAGGCCCCCCCCCCCACCCCGCGATGCAACGGTGGTATCGCCGTTGATCGccc                                     >  2:2305273/1‑139 (MQ=255)
                                                                                                        agacagcTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  1:234227/134‑1 (MQ=255)
                                                                                                         tCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCAt                                    <  1:2772554/140‑1 (MQ=255)
                                                                                                           gAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTG‑AAT‑GCCCCCCTTTTTCAATAATGTTTTTGCCCCGCGCTGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGATGCCACGCTGGGATCGCCGTTGATCGCCATcc                                  >  2:2289993/1‑139 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  2:2598913/140‑1 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  1:291723/140‑1 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGGTGG‑GAT‑GTCCCCCTTTTTTAATAATGTTTTTGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCACCCCCCCCCGCAACCGGGGGATAGCCGGTGATCGccccccgg                                >  2:1401085/1‑134 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTTAATAATTTTTTCGCCTCCCGCTGTTGCCCGCGCAGGCCCCCCCCCCCCCCCCCCGATGCAACGGTGGTATCGCCGTTGATCGCCCTCAga                                >  2:3107021/1‑139 (MQ=255)
                                                                                                               tGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg                              <  1:1289521/140‑1 (MQ=255)
                                                                                                               tGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg                              <  1:2525190/140‑1 (MQ=255)
                                                                                                               tGCCGGAGATAATCGAGATCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTTAATAAAGTTTTCGCCCCCCGCCGTTGCCCGCGCAGGCCCCCCCCCCCCCCCCCCGGTGCAACGGTGGGATCGCCCGTGATTGCCCCCAGTAg                              >  2:1560846/1‑140 (MQ=255)
                                                                                                                    gagaTAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:1816368/140‑1 (MQ=255)
                                                                                                                    agacagaTCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:474007/134‑1 (MQ=255)
                                                                                                                         aaTCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCCTTTTTCAATAAAATTTTCGCCTCCCCCTGTAGCCAGCGCAGGCCCCCCCCCCCACCGCCCCCTGCCACGGTGGGATCGCCGTTGATCGCCATCAGCAGGAGcccgtct                    >  2:234227/1‑134 (MQ=255)
                                                                                                                           tCGAGATCGGCGGGGGGTCG‑AAT‑GCCCCCCTTTTTTAATAATTTTTTCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCCCGATGCAACGATGGGATTGCCCTTGGTCGCCCTCCGTAAGAGCAAAGGATc                  >  2:998713/1‑140 (MQ=255)
                                                                                                                                aTCGGCGGGGGGTCG‑GAT‑GCCCCCCTTTTTCAATAAAGTTTTCGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCACCCCGCGCTGCCACGATGGTATCGCCGTTGATCGCCCTCAGTAGGAGCAAGGGATctgtct             >  2:2431561/1‑135 (MQ=255)
                                                                                                                                    gcggGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGc         <  1:2474167/140‑1 (MQ=255)
                                                                                                                                     cggGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGcc        <  1:2461444/140‑1 (MQ=255)
                                                                                                                                         ggTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt    <  1:2066818/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                             
AAATTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCG‑AAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646608‑646886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑