Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913646,7470TG23.4% 259.5 / 51.1 112T255P (ACC→CCC) citGtriphosphoribosyl‑dephospho‑CoA synthase
Reads supporting (aligned to +/- strand):  ref base T (2/83);  new base G (26/0);  total (29/83)
Fisher's exact test for biased strand distribution p-value = 2.44e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 146 total aligned reads displayed.

AAATTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646608‑646886
                                                                                                                                           |                                                                                                                                             
aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGt                                                                                                                                               <  2:2523618/140‑1 (MQ=255)
aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGt                                                                                                                                               <  1:2240853/140‑1 (MQ=255)
aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGt                                                                                                                                               <  2:561428/140‑1 (MQ=255)
  aTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTc                                                                                                                                             <  2:2172573/140‑1 (MQ=255)
      aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAAt                                                                                                                                        >  1:1944843/1‑140 (MQ=255)
        cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGc                                                                                                                                     <  1:1281892/140‑1 (MQ=255)
        cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGc                                                                                                                                     >  2:424907/1‑140 (MQ=255)
        cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGc                                                                                                                                     <  2:2041263/140‑1 (MQ=255)
         aaGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGcc                                                                                                                                    <  2:589901/140‑1 (MQ=255)
             gCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGGGATAATCGAGATCGGCGGGGGGTTGGATGgccccc                                                                                                                                >  2:130805/1‑139 (MQ=255)
              cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGATGgccccct                                                                                                                               >  2:2684416/1‑138 (MQ=255)
              cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGCATccccccct                                                                                                                               >  2:1950414/1‑138 (MQ=255)
              cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAACACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGcccccct                                                                                                                               >  2:2525190/1‑138 (MQ=255)
               ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCttt                                                                                                                              <  1:605993/140‑1 (MQ=255)
                  acagatTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTg                                                                                                                           <  1:315501/136‑1 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCaat                                                                                                                       <  1:549969/140‑1 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCaat                                                                                                                       <  1:1396354/140‑1 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCTTTTTTCaat                                                                                                                       >  2:2691908/1‑140 (MQ=255)
                      atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCctttttttat                                                                                                                       >  2:396418/1‑135 (MQ=255)
                               gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTTAATAAAGttttt                                                                                                              >  2:1828337/1‑138 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGATGGCCCCCTTTTTCAAAAATTTTTtcg                                                                                                             >  2:1816368/1‑140 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGAAACCCCCCTTTTTCAATAATTTTTtcg                                                                                                             >  2:1653625/1‑140 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGCCCCCCTTTTTCTATAATttttttt                                                                                                             >  2:1700008/1‑137 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGCCCCCCTTTTTCAATAATGTTTtcg                                                                                                             >  1:274748/1‑140 (MQ=255)
                                tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGCCCCCCTTTTTCAATAAAGTTTtcg                                                                                                             >  1:2668075/1‑140 (MQ=255)
                                 gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAGTGCCCCCTTTTTGCAATAAAGttttctc                                                                                                            >  2:1066981/1‑136 (MQ=255)
                                 gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCCTTTTTCTATAAAGTTTtcgc                                                                                                            >  2:2817511/1‑140 (MQ=255)
                                 gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAAAGGCCCCCTTTTTTCATAATCtttttgc                                                                                                            >  1:2694542/1‑136 (MQ=255)
                                  cTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGcc                                                                                                           <  1:238478/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:2290432/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:1768049/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:785201/140‑1 (MQ=255)
                                    aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:3109920/140‑1 (MQ=255)
                                       aaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTcgcg                                                                                                      <  2:3136835/140‑1 (MQ=255)
                                         ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  1:1066981/140‑1 (MQ=255)
                                         ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  1:1368618/140‑1 (MQ=255)
                                         ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  1:1250266/140‑1 (MQ=255)
                                          cAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGCATGCCCCCCTTTTTCTATAATATTTTTGCCTCccgccg                                                                                                   >  2:263420/1‑138 (MQ=255)
                                             gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGGCCCCCTTTTTTAAAAAATTTTGTGCCTCGCGCTGTAg                                                                                                >  2:2868134/1‑140 (MQ=255)
                                             gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTACCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTCAATAATGTTTTCGCCCCCCGCCGttg                                                                                                >  2:2896122/1‑138 (MQ=255)
                                                  cagcAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgc                                                                                           <  1:2026901/137‑1 (MQ=255)
                                                   aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACCCTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgcg                                                                                          <  2:2182775/140‑1 (MQ=255)
                                                   aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGGCCCCCTTTTTTAATAAAGTTTTTGCCCCGCGCCGTAGCCcgcg                                                                                          >  1:2100546/1‑140 (MQ=255)
                                                     cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCa                                                                                        <  1:2835342/140‑1 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAgg                                                                                      <  1:1082178/140‑1 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGCCCCCCTTTTTTAATAATGTTTTCGCCTCCCGCTGTAGCCAGCGCCgg                                                                                      >  1:83273/1‑140 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGGCGGATGGCCCCCTTTTTTTCTAATTTTTTGTCCTCCCGCCGTGGCCCGCGCAgg                                                                                      >  2:1576541/1‑140 (MQ=255)
                                                       gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGCGGGTGGAAGGGCCCCCTTTTGTAATAATTTTTGTCCCCCCCGCGGTAGCCatccgcag                                                                                      >  2:2134802/1‑133 (MQ=255)
                                                             cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCCTTTTTTAATAATGTTTTCGCCCCCCGCTGTAGCCCGCGCCGGcccccc                                                                                >  2:2461444/1‑140 (MQ=255)
                                                              ggCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCt                                                                               <  1:1562879/139‑1 (MQ=255)
                                                              aGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGTGGGTCGGACGACCCCCTTTTTTGATAAATTTTGTGCCCCCCGCTGTGTCCCACGCCGGgcccccc                                                                               >  2:73864/1‑139 (MQ=255)
                                                              aGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCCTTTTTTAATAATGTTTTTGCCCCCCCCCGTAGCCCGCGCAGGccccccc                                                                               >  2:782948/1‑139 (MQ=255)
                                                              aGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTCCATAATGTTTTTGCCCCCCGCTGTAGCCCGCGCCGGccccccc                                                                               >  2:1062982/1‑139 (MQ=255)
                                                                cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCCGTAGCCCGGGCCGGccccccccc                                                                             >  2:2083670/1‑137 (MQ=255)
                                                                   tGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCa                                                                          <  1:2691908/140‑1 (MQ=255)
                                                                      cgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcg                                                                       <  1:1996092/140‑1 (MQ=255)
                                                                       gccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTCCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgc                                                                      <  1:2983094/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCTCCTCGCCACcgcg                                                                     <  1:1494618/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:1576541/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:1653625/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:2817511/140‑1 (MQ=255)
                                                                        ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:441103/140‑1 (MQ=255)
                                                                          tGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGATGCCCCCCTTTTTCTATAATATTTTTGCCCCCCCCCGTTGCCAGCGCCGGCCCCCCCCCCCCCcccgcc                                                                   >  2:1494618/1‑139 (MQ=255)
                                                                           ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGa                                                                  <  1:263420/140‑1 (MQ=255)
                                                                           ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGa                                                                  <  1:141006/140‑1 (MQ=255)
                                                                            gACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGAt                                                                 <  1:1950414/140‑1 (MQ=255)
                                                                             aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCTCGCCACCGCGCGATGc                                                               <  1:2134802/140‑1 (MQ=255)
                                                                             aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCCTTTTTTAATAATTTTTTTGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGATg                                                                >  2:1278026/1‑140 (MQ=255)
                                                                              cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGc                                                               <  1:1828337/140‑1 (MQ=255)
                                                                              cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGc                                                               <  1:1964263/140‑1 (MQ=255)
                                                                                  gaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTCGAATGCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCACCCCGCGATGCAACGt                                                          >  1:999556/1‑140 (MQ=255)
                                                                                      tcgttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTgg                                                       <  1:1700008/140‑1 (MQ=255)
                                                                                       cgttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGCATGCCCCCCTTTTTTAATAATGTTTTCGCCCCCCGCTGTAGCCCGCGCAGGCCCCCCCCCCCCCCCCGCGATGCCACGTTggg                                                      >  2:90767/1‑139 (MQ=255)
                                                                                         ttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTAt                                                    <  2:1944843/140‑1 (MQ=255)
                                                                                                      cTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTCAATAATGTTTTCGCCCCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCGCGCTGCCAAGGTGGGATCGCCCGTGGTCGc                                       >  2:2220977/1‑140 (MQ=255)
                                                                                                       tGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc                                      <  1:2220977/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  1:2749269/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  1:2597499/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  2:1675609/140‑1 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCCTTTTTTAATAATGTTTTTGCCCCCCGCCGTAGCCCGCGCAGGCCCCCCCCCCCCCCCCCCGGCGCCACGGTGGTATCGCCGCTGATCGccc                                     >  2:2740248/1‑139 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTCAATAATGTTTTTGCCCCCCCCTGTAGGCAGCGCCAGCCCCCCCCCCCCCCCCCCGATGCCACGGTGGGATCGCCGGTGATTGccc                                     >  2:2732964/1‑139 (MQ=255)
                                                                                                        gTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTCGAATGCCCCCTTTTTTCAATAATGTTTTCGCCTCCCGCTGTAGCCAGCGCAGGCCCCCCCCCCCACCCCGCGATGCAACGGTGGTATCGCCGTTGATCGccc                                     >  2:2305273/1‑139 (MQ=255)
                                                                                                        agacagcTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCa                                     <  1:234227/134‑1 (MQ=255)
                                                                                                         tCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCAt                                    <  1:2772554/140‑1 (MQ=255)
                                                                                                           gAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGAATGCCCCCCTTTTTCAATAATGTTTTTGCCCCGCGCTGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGATGCCACGCTGGGATCGCCGTTGATCGCCATcc                                  >  2:2289993/1‑139 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  2:2598913/140‑1 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  1:291723/140‑1 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGGTGGGATGTCCCCCTTTTTTAATAATGTTTTTGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCACCCCCCCCCGCAACCGGGGGATAGCCGGTGATCGccccccgg                                >  2:1401085/1‑134 (MQ=255)
                                                                                                             aCTGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTTAATAATTTTTTCGCCTCCCGCTGTTGCCCGCGCAGGCCCCCCCCCCCCCCCCCCGATGCAACGGTGGTATCGCCGTTGATCGCCCTCAga                                >  2:3107021/1‑139 (MQ=255)
                                                                                                               tGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg                              <  1:1289521/140‑1 (MQ=255)
                                                                                                               tGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg                              <  1:2525190/140‑1 (MQ=255)
                                                                                                               tGCCGGAGATAATCGAGATCGGCGGGGGGTCGGATGCCCCCCTTTTTTAATAAAGTTTTCGCCCCCCGCCGTTGCCCGCGCAGGCCCCCCCCCCCCCCCCCCGGTGCAACGGTGGGATCGCCCGTGATTGCCCCCAGTAg                              >  2:1560846/1‑140 (MQ=255)
                                                                                                                    gagaTAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:1816368/140‑1 (MQ=255)
                                                                                                                    agacagaTCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:474007/134‑1 (MQ=255)
                                                                                                                         aaTCGAGATCGGCGGGGGGTCGAATGCCCCCCTTTTTCAATAAAATTTTCGCCTCCCCCTGTAGCCAGCGCAGGCCCCCCCCCCCACCGCCCCCTGCCACGGTGGGATCGCCGTTGATCGCCATCAGCAGGAGcccgtct                    >  2:234227/1‑134 (MQ=255)
                                                                                                                           tCGAGATCGGCGGGGGGTCGAATGCCCCCCTTTTTTAATAATTTTTTCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCCCGATGCAACGATGGGATTGCCCTTGGTCGCCCTCCGTAAGAGCAAAGGATc                  >  2:998713/1‑140 (MQ=255)
                                                                                                                                aTCGGCGGGGGGTCGGATGCCCCCCTTTTTCAATAAAGTTTTCGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCACCCCGCGCTGCCACGATGGTATCGCCGTTGATCGCCCTCAGTAGGAGCAAGGGATctgtct             >  2:2431561/1‑135 (MQ=255)
                                                                                                                                    gcggGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGc         <  1:2474167/140‑1 (MQ=255)
                                                                                                                                     cggGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGcc        <  1:2461444/140‑1 (MQ=255)
                                                                                                                                         ggTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt    <  1:2066818/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                             
AAATTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646608‑646886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: