Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4440TA27.3% 176.7 / 40.9 99intergenic (‑188/‑19)ttdR/ttdADNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base T (11/61);  new base A (27/0);  total (38/61)
Fisher's exact test for biased strand distribution p-value = 8.60e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 118 total aligned reads displayed.

TGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAA  >  NC_000913/3206305‑3206583
                                                                                                                                           |                                                                                                                                            
tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAAt                                                                                                                                              <  1:2433130/140‑1 (MQ=255)
tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAAt                                                                                                                                              >  1:2027005/1‑140 (MQ=255)
  ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAc                                                                                                                                            <  2:2027005/140‑1 (MQ=255)
       cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCATACAAATACaaaaa                                                                                                                                       >  2:2641610/1‑140 (MQ=255)
          tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACaaaaa                                                                                                                                       <  2:404834/137‑1 (MQ=255)
            ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGa                                                                                                                                  <  1:464611/140‑1 (MQ=255)
             tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                                <  1:879503/140‑1 (MQ=255)
             tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                                <  2:2170726/140‑1 (MQ=255)
             tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                                <  1:3025603/140‑1 (MQ=255)
             tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                                <  1:343325/140‑1 (MQ=255)
                 gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATAGA‑GGTgg                                                                                                                            >  1:1885328/1‑139 (MQ=255)
                  cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGcc                                                                                                                           <  1:1661736/140‑1 (MQ=255)
                      atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGAAAAAAAAAAAAAAAGGA‑GGTGCCctga                                                                                                                       >  2:279320/1‑140 (MQ=255)
                      atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAAAAAAAAAAGGA‑GTTGGCatga                                                                                                                       >  2:879503/1‑140 (MQ=255)
                      atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCatga                                                                                                                       <  2:2389352/140‑1 (MQ=255)
                         ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAACTGGA‑GTTGCCAtgatga                                                                                                                    >  1:431175/1‑140 (MQ=255)
                          tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAg                                                                                                                   <  2:1011945/140‑1 (MQ=255)
                             ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGa                                                                                                                <  1:945852/140‑1 (MQ=255)
                             ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGa                                                                                                                <  1:2641610/140‑1 (MQ=255)
                                 tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAAAAGA‑GGTGCCATGATGAGCGaaaaa                                                                                                            >  2:3039974/1‑138 (MQ=255)
                                   ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGtaa                                                                                                          >  1:15941/1‑140 (MQ=255)
                                   ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGATGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGtaa                                                                                                          >  1:794379/1‑140 (MQ=255)
                                    tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGtaat                                                                                                         <  1:1131653/140‑1 (MQ=255)
                                      tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAAAAAAAAAAAAGGA‑GGTGGCATGATGAGGGGAAGgaataa                                                                                                       >  2:1624808/1‑140 (MQ=255)
                                          gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCaa                                                                                                   <  1:2929427/140‑1 (MQ=255)
                                              aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                               <  1:1422259/140‑1 (MQ=255)
                                              aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                               <  2:15941/140‑1 (MQ=255)
                                                tCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                             <  2:2371334/140‑1 (MQ=255)
                                                    gAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAC‑AAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                                        <  1:1251717/140‑1 (MQ=255)
                                                     aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                                        <  1:3039974/140‑1 (MQ=255)
                                                        tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTCACAAAAAAAAAAAAACAGGA‑GGTGCCATGATGAGGGAAAATAATAAAAAACAAGCAGGGAaaaa                                                                                     >  2:2269030/1‑140 (MQ=255)
                                                         gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                                    <  1:633166/140‑1 (MQ=255)
                                                         agtAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                                    <  1:2136140/138‑1 (MQ=255)
                                                          ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑GTTGGCATGATGAGCGGAAGTAATAAACAAAAAGCAGTGAATaaat                                                                                   >  2:904406/1‑138 (MQ=255)
                                                                  atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCCGACAAAAACAAAAAATGGG‑GGTGCCATGATGAGCGAAAAAAAAAAGCAAAAAGCAGTGAAAAAATTGACagag                                                                           >  2:2038588/1‑140 (MQ=255)
                                                                  atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAATGGA‑GGTGCCATGATGAGGGGAAGAAATAAACAACAAGCAGTGAATAAAATGACagag                                                                           >  2:1995612/1‑140 (MQ=255)
                                                                   tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                          <  1:2269030/140‑1 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATGGA‑GGTGGCATGATGAGCGAAAAGAATAAACAACAAGCAGTGAAAAAGTTGACAgagaa                                                                         >  2:1258248/1‑139 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGG‑GTTGGCATTATGAGCGGAAAGAATAAAAAACAAGCAGTGAATAAAATGACAgagaa                                                                         >  2:1335903/1‑139 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAACAAAAAATGGG‑GGTGGCATGATGAGGGAAAGTAATAAGAAACAAGCAGGGAATAAATTGAGAAAGAt                                                                         >  2:881064/1‑140 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAAAAAAAAAAGGG‑GGTGTCATGATGAGGGGAAGAAAAAAAAAAAAAGCAGAGAAAAAAATTACAgagaa                                                                         >  2:1956372/1‑139 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                         <  1:2263207/140‑1 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                         <  2:431175/140‑1 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                         <  1:279320/140‑1 (MQ=255)
                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAAAAAGA‑GGTGGCATGATGAGCGAAAAAAAAAAAAAACAAGCAGCGAATAAAATGACAgagaa                                                                         >  2:2141060/1‑139 (MQ=255)
                                                                      tCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTg                                                                       <  1:881064/140‑1 (MQ=255)
                                                                          ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGc                                                                   <  1:2038588/140‑1 (MQ=255)
                                                                            tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGACAAAAACAAAAAAAGGA‑GGTGGCATGATGAGGGGAAGTAAAAAAAAAAAGGCAGTGGAAAAAATGACAGAGATTGttggta                                                                 >  2:472379/1‑135 (MQ=255)
                                                                            tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCTGACAAAAAAAAAAAATGGAGGTTGCC‑TGATGAGGGGAAGTAATAAACAAAAAGCAGAGAAAAAAATTAAAGAGAATGTTGCTa                                                                 >  2:1177626/1‑140 (MQ=255)
                                                                            tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑GTTGCCATGATGAGCGAAAAGAAAAAACAAAAAGCAGGGAATAAGTTGACAGAGATTGTTGCTa                                                                 >  2:2479168/1‑140 (MQ=255)
                                                                            tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAAAAGA‑GTTGGCAAGATGAGAGAAAATAAAAAACAACAAGCAATGAAAAAATTGACAGAGAATGTCGcca                                                                 >  2:714299/1‑138 (MQ=255)
                                                                              gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAAAAAAAAAAATTGA‑GGTGCCATGATGAGCGGAAATAATAAGCAACAAGCAGTGAATAAGTTGACAGAGATTGTCGCTAAc                                                               >  2:143879/1‑140 (MQ=255)
                                                                               cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAATGGG‑GGTGGCATGATGAGGGAAAATAAAAAAAAAAAAGCAGGGAATAAGTTGAAAGAGATTGTTGCTAACt                                                              >  2:266908/1‑140 (MQ=255)
                                                                                   agatatAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAc                                                          <  1:1611844/138‑1 (MQ=255)
                                                                                    aaTAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAcc                                                         <  1:1177626/140‑1 (MQ=255)
                                                                                        taAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCCGACAAAAAAAAAAAATGGG‑GTTGCCATGATGAGCGAAAAAAAAAAACAAAAAGCAGTGAATAAATTGAAAGAGATTTTTGCTAAATTTACCGccc                                                     >  2:919164/1‑139 (MQ=255)
                                                                                        taAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGA‑GGTGCCATGATGAGGGAAAGGAATAAACAACAAGCAGTGAATAAAATGACAGAGATTGTCGCTAAATTTAACGccc                                                     >  2:1154470/1‑139 (MQ=255)
                                                                                        taAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGCCCTGATGAGGGAAAAAAAAAAAAAAAAGGCAGTGAAAAAATTGACAGAGAATGTCGCTAACTTTatccccc                                                     >  2:2966673/1‑134 (MQ=255)
                                                                                        aaaaaCCACATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                     <  1:1624808/139‑1 (MQ=255)
                                                                                              cacaTTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAATTGA‑GGTGCCCTGATGGGGGAAAGGAATAAAAAAAAAGCAGTGAAAAAAATGACAGAGATTTGCGCTAACTTTTCCGCCCTGAttt                                               >  2:2581826/1‑140 (MQ=255)
                                                                                                caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAACAAAAAAAGGG‑GGTGGCATGATGAGCGGAAATAAAAAACAACAAGCAGGGGAAAAAATGAAAGAGAATGTCGCTAACTTTACCGCCATGAttttt                                             >  2:23595/1‑138 (MQ=255)
                                                                                                caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑GGTGCCATGATGAGCGGAAAGAAAAAACAACAGGCAGAGAATAAGTTTACAGAGAATGTCGCTAACTTTACCGCCATGAttttt                                             >  2:2532738/1‑138 (MQ=255)
                                                                                                caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGCCATGATGAGCGGAAGGAAAAAGCAACAAGCAAAGAAAAAATTGACAGAGAATTTCGCTAACTTTATCCCCCTGAttttt                                             >  2:2957360/1‑138 (MQ=255)
                                                                                                caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAAAAAAAAATGGA‑GGTGTCATGGTGAGCGAAAAAAAAAAACAAAAAGCAGGGAATAAGTTTGAAGAGATTATCGCTTACATTATCCCCAAGAttttt                                             >  2:1611844/1‑138 (MQ=255)
                                                                                                     ttAGTGTTATTTTGTGGCGGTAAATTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCAAAAGTAATAAGCAAAGGGGAGTGAATAAGTTGACAGAGATTGCCGCTAACTTTACCGCCATGATTTCTACCCg                                        <  2:1561355/140‑1 (MQ=255)
                                                                                                     ttAGTGGTTTTTTGGGGCGGTGAATTTTTCAAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACGGGCAGTGAATAAGTAAACAGAGAGTGTCGATATCTTTACCGCCATGATTTCTACCCg                                        <  2:1783594/140‑1 (MQ=255)
                                                                                                      tAGTGGTAGTTTGTGGCGGTGATTTTTTCCAGACAAATACAAAAACGGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGa                                       <  1:839539/140‑1 (MQ=255)
                                                                                                      tAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                                       <  1:1335903/140‑1 (MQ=255)
                                                                                                       aGTGGTAGTTTGTGGCGGTGAATTTTTTTTGACAAAAAAAAAAAATGGG‑GGTGGCCTGATGAGCGAAAATAATAAACAAAAAGCAGTGAAAAAATTGACAGAGATTGTCGCTAACTTTATCCCCATGATTTTTACCCCaa                                      >  2:839539/1‑140 (MQ=255)
                                                                                                       aGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTTCCGCCATGATTTCTACCCGaa                                      <  1:266908/140‑1 (MQ=255)
                                                                                                       aGTGGTAGTTTGGGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa                                      <  1:2880902/140‑1 (MQ=255)
                                                                                                          ggTAGTTTGTGGCGGTGAATTTTTTCCAACAAATAAAAAAAATGGA‑GGTGGCCTGATGAGCGAAAGAAATAAAGAACAGGCAGCGAAAAAATTGAGAGAAAATGTTGCTAAATTTTCCCCCCTGATTTTTACCCCAAttc                                   >  2:768669/1‑138 (MQ=255)
                                                                                                           gTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGcc                                  <  1:1154470/140‑1 (MQ=255)
                                                                                                            tAGTTTGTGGCGGTGAATTTTTTTAGGCAAAAAAAAAAAATGGG‑GGTGTCATGATGAGGGGAAGTAAAAAAAAAAAAGGAGGGAATAAAGTTAAAGAGATTGTTGCTTACTTTTTCCCCCTGATTTTTTCCCCAATGCCt                                 >  2:2383385/1‑140 (MQ=255)
                                                                                                             aGTTTGTGGCGGGGAATTTTTTCTGACAAAAAAAAAAAATGGA‑GGTTGCATGATGAGGGAAAGGAAAAAAAAAAAGGCAGTGAATAAGTTGACAGAGAATTTCGCTAACTTTTACCCCCTGAATTTTTCCCGAAAGGCtg                                >  2:1013562/1‑140 (MQ=255)
                                                                                                                ttGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                             <  1:2957360/140‑1 (MQ=255)
                                                                                                                ttGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                             <  1:2532738/140‑1 (MQ=255)
                                                                                                                ttGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                             <  1:1995612/140‑1 (MQ=255)
                                                                                                                ttGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                             <  1:143879/140‑1 (MQ=255)
                                                                                                                ttGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                             <  1:23595/140‑1 (MQ=255)
                                                                                                                ttGTGGCGGTGAATTTTCCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                             <  1:472379/140‑1 (MQ=255)
                                                                                                                    ggCGGTGATTTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt                         <  1:1238393/140‑1 (MQ=255)
                                                                                                                     gCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                        <  1:919164/140‑1 (MQ=255)
                                                                                                                     gCGGTGAATTTTCCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                        <  1:646667/140‑1 (MQ=255)
                                                                                                                      cGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑GGTGCCATGATGAGGGAAAGGAATAAGAAAAAGGCAGTGGATAAGTTGACAGAGAATGTCGCTAACTTTACCGCCATGATTTTTACCCCAATGCCTGATGACgtgg                       >  2:2944987/1‑140 (MQ=255)
                                                                                                                      cGGTGAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGCCATGATGAGCGAAAGTAATAAACAAAAAGCAGTGAAAAAATTGGAAGAGAATGTCGCTAACTTTTTCGCCCTGATTTTTTCCCCAATGCCtgatgaagggg                       >  2:646667/1‑135 (MQ=255)
                                                                                                                         tGAATTTTTTCCGACAAAAACAAAAAATGGG‑GGTGGCATGGTGAGGGGAAGAAATAAACAAAAAGCAGGGAATAAATTGTCAGAGATTGTCGCTAAATTTTCCGCCCTGATTTTTTCCCGAATGCCTGATGACGtggtgg                    >  2:2037683/1‑140 (MQ=255)
                                                                                                                          gAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                   <  1:2407293/140‑1 (MQ=255)
                                                                                                                          aaaTTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAATTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                   <  1:2037683/139‑1 (MQ=255)
                                                                                                                          aaaTTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                   <  2:1885328/139‑1 (MQ=255)
                                                                                                                                  ccAGAAAAAAACAAAACCGGGA‑GTTCCCATGATGCCAAAAGGTAATAAGCAACCGGTTGTGAAGAAGTAGACAGGGATTGTCCTTACCTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa           <  2:1409080/140‑1 (MQ=255)
                                                                                                                                    aGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa         <  1:562789/140‑1 (MQ=255)
                                                                                                                                    aGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa         <  1:1013562/140‑1 (MQ=255)
                                                                                                                                    aGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa         <  1:2966673/140‑1 (MQ=255)
                                                                                                                                     gACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                   <  1:1960787/129‑1 (MQ=255)
                                                                                                                                     gACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc        >  1:1355940/1‑140 (MQ=255)
                                                                                                                                     gACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc        >  1:892047/1‑140 (MQ=255)
                                                                                                                                          aTACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa   >  1:1495804/1‑140 (MQ=255)
                                                                                                                                          aTACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa   >  2:2934560/1‑140 (MQ=255)
                                                                                                                                           tACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaa  >  1:1409080/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                            
TGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAA  >  NC_000913/3206305‑3206583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑