Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,111,7520TC25.6% 238.2 / 28.4 121K155E (AAA→GAA) yiiQDUF1454 domain‑containing protein YiiQ
Reads supporting (aligned to +/- strand):  ref base T (72/18);  new base C (0/31);  total (72/49)
Fisher's exact test for biased strand distribution p-value = 1.74e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 132 total aligned reads displayed.

TCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGATGGGTAGC  >  NC_000913/4111615‑4111891
                                                                                                                                          |                                                                                                                                           
gcttttATTCAACCCTTAAAGCGATTCAGATAGCCCCAGCTTAATCGGTTAAACAGCGAAGGTCACCCCCTTTCCGCCGTTGCCCGCGACAACATAACGCAGTGCCCCTTCTGTCTGGGTGTAATAACTTTTTTTTTccc                                                                                                                                          <  2:2912034/137‑1 (MQ=255)
  ttttATTCAACCCTTCAAGCAATTAAGATAGCCCCAGCTTAATCGGTACAACAGCGAGGGTCACCCCTTTTCCGCCGTTGTCCGCGACAACATAACGCAGTGCCCCTTTTTTCTGGGTGTAATAACGTTTTTTTTTcccc                                                                                                                                         <  2:2542368/139‑1 (MQ=255)
  ttttATTCAAACCTCCAAGCGATTCAGATAGCGCCAGTTTAATCGGTTCAACAGCGAAGGTCACCCCTTTTTCGCGGTTGCCCGCGACAACATAACGCGGTGCCCTTTCTGTCTGGGTGTAATACCTTTTTTTTTTcccc                                                                                                                                         <  2:616658/139‑1 (MQ=255)
   tttATTCAACCCTTAAAGCGATTCAGATAGCGCCAGTTTAATCGGTTCAACAGCGAGGGCCACCCCCTTTTCGCCGTTGTCCGCGACAACATACCGCGGTGCCCCTTCTGTCTCGGTGTAATAACTTTTTTTTTCCCccg                                                                                                                                        <  2:27815/140‑1 (MQ=255)
   tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCccg                                                                                                                                        >  1:637985/1‑140 (MQ=255)
   tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCccg                                                                                                                                        >  1:2668376/1‑140 (MQ=255)
          aaaCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtag                                                                                                                                 >  1:313118/1‑140 (MQ=255)
           acccTTCAGGCGATTCAGATGCCGCCGGCTTAATGGTTTAAACAGCGAGGGTCACCCCTTTTTCCCGGTTGCCCGCAAAAAAAAACCGCAGTCCACCTTCTGCCCGGGTATAATAGCTTTTTTTTTTCCCCGCCGTtagt                                                                                                                                <  2:1409580/138‑1 (MQ=255)
            aCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtagtc                                                                                                                               >  1:2912034/1‑139 (MQ=255)
            aCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtagta                                                                                                                               >  1:1049580/1‑140 (MQ=255)
                tCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGa                                                                                                                           >  1:2729551/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  1:2769708/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  1:2224058/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  2:2490901/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  2:2137585/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  1:326817/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  1:358355/1‑140 (MQ=255)
                 cAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCACCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                                                                                          >  2:3145423/1‑140 (MQ=255)
                  acgCGTTTCAGATCGCCCCAGCTAAATCGTTCCAACAGGGAGGGCCCCCCCTTTTCCGCCGTTTCCCGCAACAACATACCGCAGTCCCCCTTCTGTCTGGGTGTAATATTTTTTTTTTTCCCCCGCCGTTAGTAGCGACt                                                                                                                         <  2:565068/138‑1 (MQ=255)
                  aaGCGATTAAGAAAGCCCCAGCTTAATCGGTCAAACAGCGAGGGCCCCCCCTTTTCCGCGTTTGCCCGCAAAAACATAACGCGGTCCCCCTTCTGTCTGGGTTTAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACt                                                                                                                         <  2:2352116/140‑1 (MQ=255)
                       aTTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGt                                                                                                                    >  1:3074456/1‑140 (MQ=255)
                        ttCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                                   >  1:1565992/1‑140 (MQ=255)
                        ttCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                                   >  2:460139/1‑140 (MQ=255)
                        ttCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                                   >  1:492449/1‑140 (MQ=255)
                        ttCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                                   >  1:582900/1‑140 (MQ=255)
                        ttCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                                   >  1:1254021/1‑140 (MQ=255)
                        ttCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                                                                                   >  1:1966215/1‑140 (MQ=255)
                               aGCGCCATCTTAATCGGTAAAACAGCGAAGGTCACCCCTTTTTCGCCGTTGTCCGCGAAAACATAACGCGGTCCCCCTTCTGTCTGGGTGTAATAATTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTg                                                                                                            <  2:1181671/140‑1 (MQ=255)
                               aGCGCCAGTTTAAGCGTTACAACAGCGAAGGTCACCCCTTTTCCGCCTTTGCCCGCAAAAACAAAACGCAGTGCCCCTTCTGTCTGGGTGTAATAGCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTg                                                                                                            <  2:2711119/140‑1 (MQ=255)
                               aGCGCCAGCTAAACCGATTCAACAGCGAAGGTCACCCCTTTTTCGCCGTTGCCCGGAAAAACATAACGCAGTGCCCCTTCTGTCTGGGTTAAATACCGTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTg                                                                                                            <  2:582900/140‑1 (MQ=255)
                                  gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                         >  2:1588840/1‑140 (MQ=255)
                                  gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                         >  1:50255/1‑140 (MQ=255)
                                  gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                         >  2:1837701/1‑140 (MQ=255)
                                  gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                         >  1:1109793/1‑140 (MQ=255)
                                  gcCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCt                                                                                                         >  1:1958578/1‑140 (MQ=255)
                                    catcTTAATCGGTACAACAGCGAAGGCCCCCCCTTTTTCGCTGTTGTCCGCGAAAACATAACGCAGTCCCCCTTTTGTCTGGGTGTAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCttt                                                                                                       <  2:2263423/137‑1 (MQ=255)
                                      gCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgg                                                                                                     >  1:2913068/1‑139 (MQ=255)
                                       cTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgtg                                                                                                    >  1:2523878/1‑140 (MQ=255)
                                         tAATCGGTCCAACAGCGAGGGTCACCCCTTTTGCGCGTTTTTCCGCGAAAACAAACCCCAGTCCCCCTTCTGTCTGGTTGTAAAAATTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGtt                                                                                                  <  2:3074456/140‑1 (MQ=255)
                                              gtttCAACAGGGAGGGTCAGCCCTTTTTCGCCGTTGTCCGCAACAACATACCGCGGTGCCCCTTCTGTCTGGGTTTAATACTTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                             <  2:326817/138‑1 (MQ=255)
                                              gtttCAACAGCGATGGTCGGCCCTTTTTCGCCTTTGCCCGCAACAACATACCGCGGTCCCCTTTTTTTCTGGTTGTAATAGCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                                                                                             <  2:492449/138‑1 (MQ=255)
                                                ttCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCa                                                                                           >  1:279416/1‑140 (MQ=255)
                                                ttCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCa                                                                                           >  1:2637185/1‑140 (MQ=255)
                                                 tCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCAt                                                                                          >  1:2242732/1‑140 (MQ=255)
                                                    aCAGCGAGGGTCACCCCTTTTTCGCCTTTGCCCGCGAAAACAAAACGCAGTGCCCCTTCTGTCTGGGTGAAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTaa                                                                                       <  2:2721768/140‑1 (MQ=255)
                                                          aaGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 >  1:702664/1‑140 (MQ=255)
                                                          aaGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 >  1:922963/1‑140 (MQ=255)
                                                          aaGGTCACCCCTTTTTCGCCTTTGCCCGCGACAAAATACCGCTGTGCCCTTTCTGCCTCGGTGAAATATCGTTTGTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 <  2:1152532/140‑1 (MQ=255)
                                                          aaGGTCACCCCCTTTTCCCCTTTGCCCGCAACAACATAACGCAGTCCCCCTTCTGTCTGGGTGTAATAGTTTTTGTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 <  2:313118/140‑1 (MQ=255)
                                                          aaGGCCACCCCTTTTTCGCCGTTGTCCGCAAAAAAAAAACGCAGTGCCCCTTCTGTCTGGGTTTAATATTGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 <  2:1966215/140‑1 (MQ=255)
                                                           agggccaccccTTTTCCGCCGTTGCCCGCGACAATATACCGCAGTGCCCCTTCTGTCTCGGTTAAATATCTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 <  2:106111/133‑1 (MQ=255)
                                                           aaggcccccccTTTTCCGCCGTTGCCCGCAAAAACATAACGCAGTGCCCCTTCTGTCTGGGTTTAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt                                                                                 <  2:1067881/133‑1 (MQ=255)
                                                            ggcccgCCCTTTTTCGCCGTGGGCGGGCACAACATACCGCGGTCCCCTTGCTGCGCGGGTGAAAGCGCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGa                                                                               <  2:2753036/135‑1 (MQ=255)
                                                            ggTCACCCCCTTTCCGCCGTTGCCCGCAACAACATACCCTTTTGCCCCTTCGGTCGGGGTGTAATAGTTTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGa                                                                               <  2:1958578/140‑1 (MQ=255)
                                                             ggcccccccTTTTCCGCTGTTGCCCGCAAAAACATACCGCAGTCCCCCTTCTGTCTGGGTGTAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGa                                                                               <  2:330637/135‑1 (MQ=255)
                                                             gTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAg                                                                              >  1:3110735/1‑140 (MQ=255)
                                                                  ccccTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGc                                                                         >  2:397171/1‑140 (MQ=255)
                                                                       tttCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGact                                                                    >  1:2452431/1‑138 (MQ=255)
                                                                       tttCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATc                                                                    >  2:80242/1‑140 (MQ=255)
                                                                            gCCTTTGCCCGCAAAAAAAAAACGCAGTGCCCTTTCTGTCTGGGTGTAATAACGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCg                                                                <  1:1575932/140‑1 (MQ=255)
                                                                            cccGTTCCCCGCGACAACAAAGCGCACTGCTCCTTCTGCTTGGGTGTAATATCGTTTGTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCg                                                                <  2:2218952/139‑1 (MQ=255)
                                                                               gttccccGCAAAAACAAACCGCAGCCCCCCTTTTTTCTGGGTATAATAACTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTg                                                             <  2:2323654/135‑1 (MQ=255)
                                                                               gTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTg                                                             >  2:321107/1‑140 (MQ=255)
                                                                                    ccGCAAAAACATACCGCAGTCCCCCTTCTGTCTGGGTATAATAAGTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATg                                                        <  2:2769708/140‑1 (MQ=255)
                                                                                          caacaTAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTcc                                                  >  1:23256/1‑140 (MQ=255)
                                                                                             caTAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGa                                               >  2:1018614/1‑140 (MQ=255)
                                                                                             caTAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGa                                               >  1:1144071/1‑140 (MQ=255)
                                                                                             caTAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGa                                               >  1:149205/1‑140 (MQ=255)
                                                                                                        gCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACCGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAgctttcgcttt                                    >  2:751155/1‑140 (MQ=255)
                                                                                                          tgcTTCTGTCTCGGTTTAATAATTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGctttcgctttcg                                  <  2:1225746/138‑1 (MQ=255)
                                                                                                            tttttGTCTGGGTGTAATAACTTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTcgcg                                <  2:1787399/136‑1 (MQ=255)
                                                                                                                 gTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                           >  1:2311456/1‑140 (MQ=255)
                                                                                                                 gTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                           >  1:2916834/1‑140 (MQ=255)
                                                                                                                 gTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                           >  1:2644245/1‑140 (MQ=255)
                                                                                                                 gTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                           >  1:731066/1‑140 (MQ=255)
                                                                                                                 gTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttt                           >  1:1787399/1‑140 (MQ=255)
                                                                                                                   ctcGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCttttt                         >  1:993055/1‑140 (MQ=255)
                                                                                                                    tcGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTg                        >  1:2674462/1‑140 (MQ=255)
                                                                                                                    tcGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTg                        >  2:279493/1‑140 (MQ=255)
                                                                                                                      ggTATAATATCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGct                      <  2:2637185/140‑1 (MQ=255)
                                                                                                                       gtgtAATATCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctc                     <  2:2916834/140‑1 (MQ=255)
                                                                                                                        tgtAATACCGTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctct                    <  1:321107/140‑1 (MQ=255)
                                                                                                                          taataaCGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGAGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTgg                  >  2:252353/1‑140 (MQ=255)
                                                                                                                            atagttttttttttCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGcc                <  2:2224058/134‑1 (MQ=255)
                                                                                                                            ataaCTTTTTTTTTCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGcc                <  1:460139/140‑1 (MQ=255)
                                                                                                                            ataaCGTTTTTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGAGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGcc                <  1:252353/140‑1 (MQ=255)
                                                                                                                                ttttttttttTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg            <  1:1304382/138‑1 (MQ=255)
                                                                                                                                 tttttttttCCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTgg           <  1:2137585/139‑1 (MQ=255)
                                                                                                                                  ttttttttTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctct                    <  1:2525587/130‑1 (MQ=255)
                                                                                                                                  tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGctct                    >  2:2525587/1‑130 (MQ=255)
                                                                                                                                  tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGTTCTGGCCCCTGGa          >  1:1273990/1‑140 (MQ=255)
                                                                                                                                  tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa          >  1:2459709/1‑140 (MQ=255)
                                                                                                                                  tttgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGa          >  1:102056/1‑140 (MQ=255)
                                                                                                                                    tgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGccc               >  2:720348/1‑133 (MQ=255)
                                                                                                                                    tgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg            <  1:1810092/136‑1 (MQ=255)
                                                                                                                                    tgtttTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTg            >  2:1810092/1‑136 (MQ=255)
                                                                                                                                     ttttttCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGATgg       <  1:80242/139‑1 (MQ=255)
                                                                                                                                     tttttcCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGATgg       <  2:2644245/139‑1 (MQ=255)
                                                                                                                                          tCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGATGGGTAGc  <  1:1869769/140‑1 (MQ=255)
                                                                                                                                          tCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGATGGGTAGc  <  2:149205/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
TCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATCACCGCTGCCATGTATTCCTGAGCTTTCGCTTTCGCGGCTTTTTGCTCTGGCCCCTGGATGGGTAGC  >  NC_000913/4111615‑4111891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: