BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	204,281	G→T	V312F (GTC→TTC)	lpxB →	lipid A disaccharide synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	204,281	0	G	T	100.0%	505.4 / NA	140	V312F (GTC→TTC)	lpxB	lipid A disaccharide synthase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (68/72); total (68/72)

Only 100 of 145 total aligned reads displayed.

GCCAGCGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATGTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGATGCACGAT  >  NC_000913/204146‑204415

gCCAGCGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTtctc                                                                                                                                    <  1:896094/140‑1 (MQ=255)

gCCAGCGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTtctc                                                                                                                                    >  1:352609/1‑140 (MQ=255)

 ccAGCGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCg                                                                                                                                   >  1:1652458/1‑140 (MQ=255)

     cGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGc                                                                                                                               >  1:2271070/1‑140 (MQ=255)

     cGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGc                                                                                                                               >  2:2183613/1‑140 (MQ=255)

       aTGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCa                                                                                                                             >  2:1805190/1‑140 (MQ=255)

        tGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCaa                                                                                                                            >  2:1546932/1‑140 (MQ=255)

        tGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCaa                                                                                                                            >  1:2716656/1‑140 (MQ=255)

        tGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCaa                                                                                                                            <  2:1913745/140‑1 (MQ=255)

            gcgcTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAGACTGATTATTTCTCGCTGCCAAATct                                                                                                                        >  1:584685/1‑140 (MQ=255)

            gcgcTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATct                                                                                                                        >  1:316394/1‑140 (MQ=255)

            gcgcTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATct                                                                                                                        >  1:20322/1‑140 (MQ=255)

             cgcTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATctg                                                                                                                       <  1:1514729/140‑1 (MQ=255)

               cTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATctgct                                                                                                                     >  2:125053/1‑140 (MQ=255)

               cTACTGGCGTCGGGTACGGCAGCCCTGGA‑‑GTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTgg                                                                                                                   <  2:2972188/140‑1 (MQ=255)

                 aCTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAGACTGATTATTTCTCGCTGCCAAATCTGCTgg                                                                                                                   <  2:584685/140‑1 (MQ=255)

                 aCTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTgg                                                                                                                   <  1:1805190/140‑1 (MQ=255)

                  cTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGc                                                                                                                  >  1:2169640/1‑140 (MQ=255)

                       gTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCa                                                                                                             <  2:1419583/140‑1 (MQ=255)

                       gTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCa                                                                                                             <  2:1219945/140‑1 (MQ=255)

                        tCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCag                                                                                                            >  2:1733929/1‑140 (MQ=255)

                          gggTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCg                                                                                                                 <  1:2223692/133‑1 (MQ=255)

                          gggTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCg                                                                                                                 >  2:2223692/1‑133 (MQ=255)

                          gggTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCagag                                                                                                          >  2:2549777/1‑140 (MQ=255)

                            gTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTCTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCagagag                                                                                                        >  1:2192004/1‑140 (MQ=255)

                             tACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATGTCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGt                                                                                                       <  2:1239130/140‑1 (MQ=255)

                             tACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGt                                                                                                       <  1:2611302/140‑1 (MQ=255)

                             tACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGt                                                                                                       <  1:3161771/140‑1 (MQ=255)

                               cGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTa                                                                                                     >  1:646515/1‑140 (MQ=255)

                                 gCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCa                                                                                                             >  1:2547762/1‑130 (MQ=255)

                                    gCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCaa                                                                                                <  2:2716656/140‑1 (MQ=255)

                                     cccTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCaaa                                                                                               >  1:902428/1‑140 (MQ=255)

                                      ccTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGc                                                                                                              >  1:1222862/1‑124 (MQ=255)

                                      ccTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCa                                                                                                             >  1:86537/1‑125 (MQ=255)

                                      ccTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCa                                                                                                             <  2:86537/125‑1 (MQ=255)

                                        cagAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGaa                                                                                            <  1:2968525/138‑1 (MQ=255)

                                            gtgtATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAattat                                                                                        <  2:1652458/140‑1 (MQ=255)

                                            gtgtATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTCTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAattat                                                                                        <  2:2192004/140‑1 (MQ=255)

                                               tATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGt                                                                                                       <  1:2316355/122‑1 (MQ=255)

                                               tATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGt                                                                                                       >  2:2316355/1‑122 (MQ=255)

                                               tATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGc                                                                                     >  1:2906963/1‑140 (MQ=255)

                                               tATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGc                                                                                     >  2:1710415/1‑140 (MQ=255)

                                               tATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGc                                                                                     >  2:1151447/1‑140 (MQ=255)

                                                 tGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAg                                                                                   <  2:563007/140‑1 (MQ=255)

                                                   cTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGa                                                                                 <  1:806507/140‑1 (MQ=255)

                                                     ggCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCa                                                                                                 <  1:2894560/122‑1 (MQ=255)

                                                      gCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGGGGGCAGAGGGTTAGTTAAAAAATTATTGAAGGaaat                                                                              >  2:2968525/1‑138 (MQ=255)

                                                      gCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAatt                                                                                          >  2:3145805/1‑128 (MQ=255)

                                                      gCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAatt                                                                                          <  1:3145805/128‑1 (MQ=255)

                                                        gAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAgt                                                                            <  1:1546932/140‑1 (MQ=255)

                                                            tGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGa                                                                        >  2:313137/1‑140 (MQ=255)

                                                                   tggtggtggGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCaa                                                                 >  2:709393/1‑140 (MQ=255)

                                                                             atatCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTg                                                       <  1:125053/140‑1 (MQ=255)

                                                                             atatCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTg                                                       >  2:1998827/1‑140 (MQ=255)

                                                                               atCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcg                                                     >  1:2590790/1‑140 (MQ=255)

                                                                               atCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcg                                                     <  2:82185/140‑1 (MQ=255)

                                                                                tCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcgg                                                    >  2:466952/1‑140 (MQ=255)

                                                                                tCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcgg                                                    <  2:646515/140‑1 (MQ=255)

                                                                                tCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcgg                                                    >  1:300863/1‑140 (MQ=255)

                                                                                 cGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcggc                                                   <  2:1981879/140‑1 (MQ=255)

                                                                                 cGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcgg                                                    <  1:539958/139‑1 (MQ=255)

                                                                                  gCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcggcg                                                  <  1:1151447/140‑1 (MQ=255)

                                                                                  gCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTgcggcg                                                  >  1:625113/1‑140 (MQ=255)

                                                                                   cATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGgcgc                                                 <  2:1549991/140‑1 (MQ=255)

                                                                                   cATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGgcgc                                                 <  1:1998827/140‑1 (MQ=255)

                                                                                     tGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCt                                                        <  2:2063871/131‑1 (MQ=255)

                                                                                     tGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCt                                                        >  1:2063871/1‑131 (MQ=255)

                                                                                      gAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGt                                              >  1:1356616/1‑140 (MQ=255)

                                                                                        aGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTa                                            >  1:1961273/1‑140 (MQ=255)

                                                                                         gCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTAc                                           <  1:1710415/140‑1 (MQ=255)

                                                                                              ttACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTg                                      >  2:2716884/1‑140 (MQ=255)

                                                                                                    tCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCg                                >  2:2573808/1‑140 (MQ=255)

                                                                                                     cTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGa                               <  1:2872701/140‑1 (MQ=255)

                                                                                                      tGGTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGaa                              >  2:2306794/1‑140 (MQ=255)

                                                                                                        gTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACg                            >  1:1002706/1‑140 (MQ=255)

                                                                                                        gTTGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACg                            >  1:839541/1‑140 (MQ=255)

                                                                                                          tGGCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAGCggg                          <  2:537435/140‑1 (MQ=255)

                                                                                                            gCGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGaa                        <  2:2590790/140‑1 (MQ=255)

                                                                                                             cGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGaaa                       <  2:871829/140‑1 (MQ=255)

                                                                                                             cGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGaaa                       >  2:2889304/1‑140 (MQ=255)

                                                                                                             cGAAGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGaaa                       >  2:242633/1‑140 (MQ=255)

                                                                                                               aaGCGGCTGGTGAAACCTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAAc                     >  2:2585578/1‑140 (MQ=255)

                                                                                                               aaGCGGCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACgg                           <  2:2035688/134‑1 (MQ=255)

                                                                                                                    gCTGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGcc                <  1:2306794/140‑1 (MQ=255)

                                                                                                                      tGGTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGC‑GGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAATGGGAAAACCAGCCAcg             <  2:462333/140‑1 (MQ=255)

                                                                                                                       ggTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGaa                        <  1:1085482/129‑1 (MQ=255)

                                                                                                                       ggTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGaa                        >  2:1085482/1‑129 (MQ=255)

                                                                                                                       ggTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             <  2:1165897/140‑1 (MQ=255)

                                                                                                                       ggTGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             <  1:466952/140‑1 (MQ=255)

                                                                                                                         tGAAAACTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcgcg           <  2:323985/140‑1 (MQ=255)

                                                                                                                           aaaaCTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             >  2:1350248/1‑136 (MQ=255)

                                                                                                                           aaaaCTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             <  1:1350248/136‑1 (MQ=255)

                                                                                                                           aaaaCTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGAt         <  2:1124183/140‑1 (MQ=255)

                                                                                                                           aaaaCTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGAt         <  1:58782/140‑1 (MQ=255)

                                                                                                                            aaaCTGATTATTTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGATg        <  2:625113/140‑1 (MQ=255)

                                                                                                                                  attattTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             <  2:2482562/129‑1 (MQ=255)

                                                                                                                                  attattTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             <  2:332580/129‑1 (MQ=255)

                                                                                                                                  attattTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             >  1:332580/1‑129 (MQ=255)

                                                                                                                                  attattTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCAcg             >  1:2482562/1‑129 (MQ=255)

                                                                                                                                  attattTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGATGCACGAt  <  1:1583059/140‑1 (MQ=255)

GCCAGCGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATGTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGATGCACGAT  >  NC_000913/204146‑204415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`