BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,576,484	G→T	A379D (GCT→GAT)	yddB ←	putative TonB‑dependent receptor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,576,484	0	G	T	100.0%	413.2 / NA	117	A379D (GCT→GAT)	yddB	putative TonB‑dependent receptor
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (55/62); total (55/62)

Only 100 of 117 total aligned reads displayed.

GATTCAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACAGCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCCCAACCAACGGTGGTAC  >  NC_000913/1576349‑1576619

gATTCAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTg                                                                                                                                     >  1:892710/1‑140 (MQ=255)

  ttCAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTggg                                                                                                                                   <  1:400631/140‑1 (MQ=255)

  ttCAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTggg                                                                                                                                   >  1:2753788/1‑140 (MQ=255)

    cAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGaa                                                                                                                                 <  1:2207024/140‑1 (MQ=255)

    cAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGaa                                                                                                                                 <  1:2044491/140‑1 (MQ=255)

     aGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGaaa                                                                                                                                <  1:2462303/140‑1 (MQ=255)

      gACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAAt                                                                                                                               >  1:2065077/1‑140 (MQ=255)

          ggTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATgtgt                                                                                                                           >  1:2811938/1‑140 (MQ=255)

          ggTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATgtgt                                                                                                                           >  2:633420/1‑140 (MQ=255)

                   gTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCg                                                                                                                  >  2:2911296/1‑140 (MQ=255)

                    ttCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGc                                                                                                                 <  1:2255336/140‑1 (MQ=255)

                     tCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  1:2926943/1‑140 (MQ=255)

                     tCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  2:1171939/1‑140 (MQ=255)

                     tCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  2:3059189/1‑140 (MQ=255)

                     tCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  1:1767890/1‑140 (MQ=255)

                     tCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  2:708575/1‑140 (MQ=255)

                     tCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  2:725452/1‑140 (MQ=255)

                      cAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTc                                                                                                                          >  2:2899537/1‑129 (MQ=255)

                      cAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTc                                                                                                                          <  1:2899537/129‑1 (MQ=255)

                       aGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCAc                                                                                                              <  1:297901/140‑1 (MQ=255)

                         tCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACgg                                                                                                            <  1:997885/140‑1 (MQ=255)

                         tCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACgg                                                                                                            <  1:115476/140‑1 (MQ=255)

                         tCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACgg                                                                                                            <  2:1443163/140‑1 (MQ=255)

                          ccACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                <  2:2038442/135‑1 (MQ=255)

                          ccACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGcc                                                                                                                >  1:2038442/1‑135 (MQ=255)

                            aCGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTg                                                                                                         <  1:3149907/140‑1 (MQ=255)

                              gCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCa                                                                                                       <  1:460590/140‑1 (MQ=255)

                              gCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCa                                                                                                       <  2:2811938/140‑1 (MQ=255)

                              gCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCa                                                                                                       <  1:1171939/140‑1 (MQ=255)

                               cATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCaa                                                                                                      <  2:698405/140‑1 (MQ=255)

                                aTCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAAc                                                                                                     <  1:633420/140‑1 (MQ=255)

                                 tCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACg                                                                                                    <  2:2259656/140‑1 (MQ=255)

                                 tCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACg                                                                                                    <  2:2606063/140‑1 (MQ=255)

                                 tCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACg                                                                                                    <  2:880353/140‑1 (MQ=255)

                                   ggAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGcc                                                                                                  >  2:2173108/1‑140 (MQ=255)

                                    gAATAGATGTATTCAGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGccc                                                                                                 <  1:386722/140‑1 (MQ=255)

                                        aGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTa                                                                                             <  1:708575/140‑1 (MQ=255)

                                        aGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTa                                                                                             <  1:725452/140‑1 (MQ=255)

                                        aGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTa                                                                                             <  2:956078/140‑1 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACggg                                                                                                           >  2:2147031/1‑124 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACggg                                                                                                           <  1:2147031/124‑1 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGc                                                                                                   <  1:2383693/132‑1 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGc                                                                                                   >  2:2383693/1‑132 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAat                                                                                           >  1:2942734/1‑140 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAat                                                                                           <  2:1767890/140‑1 (MQ=255)

                                          aTGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAat                                                                                           <  2:2942734/140‑1 (MQ=255)

                                           tGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAata                                                                                          <  2:82824/140‑1 (MQ=255)

                                           tGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAata                                                                                          <  2:2065077/140‑1 (MQ=255)

                                               ttCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCAc                                                                                      >  2:2767570/1‑140 (MQ=255)

                                                  cgcgCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCat                                                                                   <  2:77061/140‑1 (MQ=255)

                                                  cgcgCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCat                                                                                   <  2:2796645/140‑1 (MQ=255)

                                                  cgcgCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCat                                                                                   <  2:2926943/140‑1 (MQ=255)

                                                    cgcCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTg                                                                                               <  1:2617555/126‑1 (MQ=255)

                                                    cgcCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTg                                                                                               >  2:2617555/1‑126 (MQ=255)

                                                    cgcCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCatat                                                                                 >  2:161248/1‑140 (MQ=255)

                                                    cgcCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCatat                                                                                 >  2:221451/1‑140 (MQ=255)

                                                     gcCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATg                                                                                >  1:2963571/1‑140 (MQ=255)

                                                                 ttGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGtt                                                                    <  1:221451/140‑1 (MQ=255)

                                                                   gATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGt                                                                     >  2:468977/1‑137 (MQ=255)

                                                                   gATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCg                                                                  <  2:892710/140‑1 (MQ=255)

                                                                   gATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCg                                                                  >  2:1961553/1‑140 (MQ=255)

                                                                   gATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCg                                                                  <  1:1961553/140‑1 (MQ=255)

                                                                         aaaCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTAc                                                            >  2:1924235/1‑140 (MQ=255)

                                                                         aaaCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTAc                                                            <  1:1924235/140‑1 (MQ=255)

                                                                          aaCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTAcc                                                           <  1:2911296/140‑1 (MQ=255)

                                                                           aCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCa                                                          <  1:363577/140‑1 (MQ=255)

                                                                           aCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCa                                                          <  2:1156021/140‑1 (MQ=255)

                                                                           aCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCa                                                          <  2:2963571/140‑1 (MQ=255)

                                                                           aCATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCa                                                          <  1:2173108/140‑1 (MQ=255)

                                                                               tACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATg                                                      >  1:2392618/1‑140 (MQ=255)

                                                                                    aCGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATg                                                 >  2:1037655/1‑140 (MQ=255)

                                                                                     cGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGTAAATGTGTCCTAATCCGCCACCGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGa                                                >  2:230161/1‑140 (MQ=255)

                                                                                      ggCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  1:3145038/1‑140 (MQ=255)

                                                                                      ggCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  1:608014/1‑140 (MQ=255)

                                                                                      ggCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  2:2194448/1‑140 (MQ=255)

                                                                                      ggCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  1:2742681/1‑140 (MQ=255)

                                                                                      ggCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  2:1027347/1‑140 (MQ=255)

                                                                                      ggCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  1:2498062/1‑140 (MQ=255)

                                                                                      ggCGAAATTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGAt                                               >  1:878541/1‑140 (MQ=255)

                                                                                       gCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATc                                              >  2:163159/1‑140 (MQ=255)

                                                                                           aTTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGa                                          <  1:2194448/140‑1 (MQ=255)

                                                                                                tGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGt                                     <  2:2498062/140‑1 (MQ=255)

                                                                                                tGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGt                                     <  2:2742681/140‑1 (MQ=255)

                                                                                                   cAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGtata                                  <  2:1003868/140‑1 (MQ=255)

                                                                                                    aGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATaa                                 <  2:3145038/140‑1 (MQ=255)

                                                                                                      tCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGtata                                  >  1:2464456/1‑137 (MQ=255)

                                                                                                      tCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGtata                                  <  2:2464456/137‑1 (MQ=255)

                                                                                                      tCCAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATc                               >  1:272128/1‑140 (MQ=255)

                                                                                                       ccAGGCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCa                              <  2:608014/140‑1 (MQ=255)

                                                                                                           gCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACt                            >  2:1294083/1‑138 (MQ=255)

                                                                                                           gCGTGTTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACt                            <  1:1294083/138‑1 (MQ=255)

                                                                                                              tgtTTTGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAatat                       >  2:1009998/1‑140 (MQ=255)

                                                                                                                ttttGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGa                     >  1:3041432/1‑140 (MQ=255)

                                                                                                                  ttGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATc                   <  2:272128/140‑1 (MQ=255)

                                                                                                                   tGAAGGTGTAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATcc                  <  1:1009998/140‑1 (MQ=255)

                                                                                                                     aaGGTGTAATTATCTTCATCCTGGGAAATGTGTTCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCcca                <  1:2767570/140‑1 (MQ=255)

                                                                                                                         tgtAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCccaacca            >  1:1704759/1‑140 (MQ=255)

                                                                                                                          gtAATTATCTACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCccaaccaa           <  2:2392618/140‑1 (MQ=255)

                                                                                                                                   tACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCCCAACCAACGGTGGTAc  >  1:1752902/1‑140 (MQ=255)

                                                                                                                                   tACATCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCCCAACCAACGGTGGTAc  <  2:1752902/140‑1 (MQ=255)

GATTCAGACTGGTTATGGCGTTCAGTCCACGCATCGGAATAGATGTATTCCGCGCCGAAGTAGGGTTGATGCGAAACATTACCCACGGCGAATTTTTGCCAGTCCAGGCGTGTTTTGAAGGTGTAATTATCTACAGCCTGGGAAATGTGTCCTAATCCGCCACGGGTGCAACGCCCTGTAATATCACCATATGTACATGAAAGTTCGGTGTACCAGATGTCATGATCGTGACGGGTATAATCACTAATATGATCCCAACCAACGGTGGTAC  >  NC_000913/1576349‑1576619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`