Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4460CA23.8% 230.4 / 19.0 105intergenic (‑190/‑17)ttdR/ttdADNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (18/62);  new base A (22/3);  total (40/65)
Fisher's exact test for biased strand distribution p-value = 5.28e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 125 total aligned reads displayed.

CCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTA  >  NC_000913/3206307‑3206582
                                                                                                                                           |                                                                                                                                          
ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAc                                                                                                                                            <  2:2142108/140‑1 (MQ=255)
 cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACa                                                                                                                                           <  1:22833/140‑1 (MQ=255)
     cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAaaaaaaaaaa                                                                                                                                       >  1:3210517/1‑140 (MQ=255)
     cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAaaaaaaaaaa                                                                                                                                       >  2:3384725/1‑140 (MQ=255)
        tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTg                                                                                                                                    >  1:2091675/1‑140 (MQ=255)
        tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTg                                                                                                                                    <  2:2060907/140‑1 (MQ=255)
          ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAaaaaaaaaaaatagg                                                                                                                                  >  2:849590/1‑135 (MQ=255)
           tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                                <  2:2547170/140‑1 (MQ=255)
           tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                                <  2:2980760/140‑1 (MQ=255)
             tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑Gtt                                                                                                                              >  1:1813492/1‑140 (MQ=255)
               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAACAAGA‑GGTGc                                                                                                                            >  1:609486/1‑140 (MQ=255)
                   aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCatg                                                                                                                        <  1:3369663/140‑1 (MQ=255)
                    atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑GTTTTCatga                                                                                                                       >  1:2919267/1‑140 (MQ=255)
                    atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCatga                                                                                                                       <  2:1899075/140‑1 (MQ=255)
                    atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCatga                                                                                                                       <  1:473536/140‑1 (MQ=255)
                          attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑g                                                                                                                <  2:3164995/140‑1 (MQ=255)
                          attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑g                                                                                                                <  2:3166549/140‑1 (MQ=255)
                           ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Ga                                                                                                               <  2:1724127/140‑1 (MQ=255)
                           ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Ga                                                                                                               <  2:449401/140‑1 (MQ=255)
                           ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Ga                                                                                                               <  2:2108339/140‑1 (MQ=255)
                             cTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑Gaaa                                                                                                             <  1:811143/140‑1 (MQ=255)
                              ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAg                                                                                                            <  1:849590/140‑1 (MQ=255)
                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGA‑GGTGGCATTATGAGC‑GGAAga                                                                                                           >  2:2679034/1‑139 (MQ=255)
                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAAAAAAAAATAGA‑GGTTGCATGATGAGG‑GAAAga                                                                                                           >  2:3229126/1‑139 (MQ=255)
                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCCGACAAAAACAAAAAATAGA‑GGTGCCATGGTGAAC‑Ggaaaa                                                                                                           >  2:1171048/1‑138 (MQ=255)
                                aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAACAAAAAAAAGA‑GGTGCCATGATGAGC‑GGAAgga                                                                                                          >  1:1081827/1‑138 (MQ=255)
                                 ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGGCATGATGAGG‑Gaaaagaa                                                                                                         >  2:2199535/1‑136 (MQ=255)
                                  tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGtaat                                                                                                        <  1:2857988/140‑1 (MQ=255)
                                    tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGtaataa                                                                                                      <  2:2968919/140‑1 (MQ=255)
                                        tttGATTCACGAACT‑TTTATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAATCAAc                                                                                                 <  1:2569170/139‑1 (MQ=255)
                                        gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCaa                                                                                                  <  2:13807/140‑1 (MQ=255)
                                        gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCaa                                                                                                  <  1:2747112/140‑1 (MQ=255)
                                        gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCaa                                                                                                  <  2:1908463/140‑1 (MQ=255)
                                         acagttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAAc                                                                                                 <  1:792384/136‑1 (MQ=255)
                                            aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAgg                                                                                              <  1:3457002/140‑1 (MQ=255)
                                            aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAgg                                                                                              <  2:2091675/140‑1 (MQ=255)
                                             ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCTAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGc                                                                                             <  1:2040565/140‑1 (MQ=255)
                                             ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGc                                                                                             <  1:2199535/140‑1 (MQ=255)
                                              tCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCa                                                                                            <  1:1171048/140‑1 (MQ=255)
                                                   aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGaa                                                                                       <  2:1414511/140‑1 (MQ=255)
                                                   aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGaa                                                                                       <  1:1729936/140‑1 (MQ=255)
                                                      tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGAAAAATAAAAAAAATGGA‑GGTGGCATGATGGGG‑GCAAGAAATAAACAACAAGCAGTGAATaa                                                                                    >  2:105966/1‑140 (MQ=255)
                                                      tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGA‑GGTGCCATGATGGGC‑GGAAGAAAAAAACAACAAGCAGGGAaaaa                                                                                    >  1:2176809/1‑140 (MQ=255)
                                                       gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGCCATGATGAGG‑GAAAAAAATAAAAAAAAAGCAGAGAaaaaa                                                                                   >  1:1693154/1‑139 (MQ=255)
                                                        ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCCGACAAAAAAAAAAAATGGA‑GGTGCCATGGTGAGG‑GAAAGGAATAAACAAAAAGCAGTGAATaaaa                                                                                  >  1:1984208/1‑138 (MQ=255)
                                                        ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCCTGATGAGG‑GGAAGAAAAAAAAAACAAGCAGGGAATaaaa                                                                                  >  2:2003680/1‑138 (MQ=255)
                                                        ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATGATGAGC‑GAAAAAAAAAAACAAAAAGCAGGGaaactgt                                                                                  >  2:792384/1‑135 (MQ=255)
                                                        ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTCAAACAAAAACAAAAAATGGG‑GGTGGCCTGGTGAGC‑GGAAGAAATAAACAAAAGGCAGTGAaaaaat                                                                                  >  2:3181712/1‑138 (MQ=255)
                                                         tAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGtt                                                                                 <  1:2049988/140‑1 (MQ=255)
                                                            ttACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAAAAAAAAAAATGGA‑GGTGCCCTTATGAGA‑GAAAGAAATAAACAAAAAGCAGGGAaaaaaatgaa                                                                              >  2:1758967/1‑134 (MQ=255)
                                                             tACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACa                                                                             <  1:2586777/140‑1 (MQ=255)
                                                                atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATTGA‑GTTGCCATGATGAGC‑GAAAAAAATAAAAAAAAAGCAGTGAAAAAATTGACagag                                                                          >  2:3449795/1‑140 (MQ=255)
                                                                 tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgana                                                                         <  1:1237730/140‑1 (MQ=255)
                                                                  atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGACAAATACAAAAAATGGA‑GTTGGCATGATGAGG‑GAAAGAAATAAACAAAAAGCAGAGAAAAAGTTGAGAGAGAt                                                                        >  2:1237730/1‑140 (MQ=255)
                                                                  atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGG‑GGTGGCCTGATGAGG‑GGAAGGAAAAAAAAAAAAGCAGGGAAAAAAATGAAAgagaa                                                                        >  2:131566/1‑139 (MQ=255)
                                                                  atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAAATGGG‑GGTGCCCTGATGAGC‑GGAAAAAAAAAACAACAAGCAGGGAATAAATTTACAgagaa                                                                        >  2:231159/1‑139 (MQ=255)
                                                                      aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGACAAAAAAAAAAAATGGG‑GTTGGCATGATGAGC‑GAAAGAAATAAAAAAAAGGGAGTGAATAAGTTGGAagaggatgtg                                                                    >  2:563816/1‑134 (MQ=255)
                                                                      aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAAAAAAAAAATGA‑GGTGGCCTGATGAGG‑GAAAATAATAAAAAAAAAGCAGTGAAAAAATTGACAGAGATTGtt                                                                    >  2:506961/1‑139 (MQ=255)
                                                                       cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCg                                                                   <  1:231159/140‑1 (MQ=255)
                                                                         gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCAACAAAAAAAAAAAAAGGA‑GGTGCCCTGATGAGC‑GAAAGTAATAAACAACAAGCAGTGAATAAAATGACAGAGATTTTTGCt                                                                 >  2:2535558/1‑140 (MQ=255)
                                                                         gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAAATGA‑GGTGGCATGATGGGG‑GGAAGTAATAAACAACAAGGAGGGAAAAAATTTACAGAGAATTTCGCt                                                                 >  2:2882543/1‑140 (MQ=255)
                                                                         gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                                 <  1:3449795/140‑1 (MQ=255)
                                                                          tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATGATGAGG‑GAAAAAAATAAACAAAAAGCAGTGAAAAAAGTGACAAAGATTTTCGCTa                                                                >  2:8402/1‑140 (MQ=255)
                                                                          tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTa                                                                <  1:3181712/140‑1 (MQ=255)
                                                                          tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCACACAAAAAAAAAAAATGGA‑GGTGGCCTGATGAGC‑GGAAAAAATAAAAAAAAAGGAGGGGATAAATTGACAGAGAATGTTGCTa                                                                >  2:443361/1‑140 (MQ=255)
                                                                            gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAAATGGA‑GGTGGCATGATGAGC‑GAAAGTAATAAACAACAAGCAGTGAATAAATTGACAGAGATTGTCGCTAAc                                                              >  2:38029/1‑140 (MQ=255)
                                                                             cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAAAAAAAAAAATGGA‑GTTGGCATGATGAGG‑GGAAGAAAAAAACAAAAAGGAGGGAAAAAAATTACAGAGAATGTTGCTAACt                                                             >  2:1516075/1‑140 (MQ=255)
                                                                                 aaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAATTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTAc                                                         <  2:1813492/140‑1 (MQ=255)
                                                                                 aaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAc                                                         <  2:3481641/140‑1 (MQ=255)
                                                                                     ataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACGGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGcc                                                     <  2:2448016/140‑1 (MQ=255)
                                                                                      aaaacCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                    <  1:8402/139‑1 (MQ=255)
                                                                                      aaaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                    <  1:1149366/139‑1 (MQ=255)
                                                                                      aaaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                    <  1:3438076/139‑1 (MQ=255)
                                                                                              caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGGTTGCC‑TGGTTAGCGGAAAGAAAAAAAAAAAAGG‑AGGGAAAAAAATTAAAGAGATTGTTGCTAAATTTACCGCCCAGAttttt                                            >  2:1679735/1‑138 (MQ=255)
                                                                                              caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCt                                            <  1:443361/140‑1 (MQ=255)
                                                                                                     aGTGGTATTTTGTGGCGGTAAATTTTTCCAGACAAATACAAAACCTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGaa                                     <  1:767039/140‑1 (MQ=255)
                                                                                                     aGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa                                     <  2:2176809/140‑1 (MQ=255)
                                                                                                     aGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa                                     <  1:1797912/140‑1 (MQ=255)
                                                                                                      gTGGTAGTTTGTGGGGGTGAATTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGAAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                                    <  2:609486/140‑1 (MQ=255)
                                                                                                      gTGGTAGTTTGTGGCGGTGAATTTTTCCAGAAAAATACAAAAACGGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                                    <  1:2657275/140‑1 (MQ=255)
                                                                                                       tGGTAGTTTGTGGGGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATg                                   <  1:131566/140‑1 (MQ=255)
                                                                                                         gTAGTTTGTGGCGGTGGATTTTTTCAGACAAATACAAAAAATGGA‑GGTGGCATGATTAGG‑GGAAGGAATAAACAAAAAGCAGGGAAAAAATTTACAGAGATTGTCGCTAACTTTTTCGCCATGATTTTTACCCCAAAGcc                                 >  2:1592138/1‑140 (MQ=255)
                                                                                                                  ggggttaaaTTTTTCCAGAAAAAAACAAAATCTGGT‑GTTGCCATGATGAGC‑GAAAGAAATAAGCAACAGGGATTAAATAAGTGGAAAGAGATTGCCGCTAACTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACgt                        <  2:1756252/133‑1 (MQ=255)
                                                                                                                   gCGGTGATTTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                       <  1:1480435/140‑1 (MQ=255)
                                                                                                                   gCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                       <  1:2882543/140‑1 (MQ=255)
                                                                                                                      gTGAATTTTCCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAAATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtggtg                    <  1:105966/140‑1 (MQ=255)
                                                                                                                       tGAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAA‑AAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                  <  2:597335/140‑1 (MQ=255)
                                                                                                                        gAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGGGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                  <  1:2679034/140‑1 (MQ=255)
                                                                                                                        gAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                  <  2:2339560/140‑1 (MQ=255)
                                                                                                                        gAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                  <  2:1693154/140‑1 (MQ=255)
                                                                                                                        aaaTTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                  <  1:2535558/139‑1 (MQ=255)
                                                                                                                                 cAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa         <  1:3229126/140‑1 (MQ=255)
                                                                                                                                  aGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAATTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa        <  2:3294277/140‑1 (MQ=255)
                                                                                                                                   gACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc       >  2:2772315/1‑140 (MQ=255)
                                                                                                                                   gACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAAc       <  1:506961/140‑1 (MQ=255)
                                                                                                                                        aTACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa  <  2:3081082/140‑1 (MQ=255)
                                                                                                                                        aTACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa  >  2:171020/1‑140 (MQ=255)
                                                                                                                                        aTACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa  >  1:791254/1‑140 (MQ=255)
                                                                                                                                        aTACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa  >  2:760479/1‑140 (MQ=255)
                                                                                                                                        aTACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa  <  1:1592138/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                          
CCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGC‑GAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTA  >  NC_000913/3206307‑3206582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑