Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,453,510 G→T A314S (GCG→TCG)  ytfT → galactofuranose ABC transporter putative membrane subunit YtfT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,453,5100GT99.6% 889.8 / ‑4.9 250A314S (GCG→TCG) ytfTgalactofuranose ABC transporter putative membrane subunit YtfT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base T (108/141);  minor base C (0/1);  total (108/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.30e-01

Only 100 of 252 total aligned reads displayed.

GGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCTTTAC  >  NC_000913/4453374‑4453645
                                                                                                                                        |                                                                                                                                       
ggtgATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCgg                                                                                                                                      <  2:1073022/140‑1 (MQ=255)
   gATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCggtgg                                                                                                                                   <  2:2165299/140‑1 (MQ=255)
   gATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCggtgg                                                                                                                                   <  2:1539614/140‑1 (MQ=255)
     ttGGCGGCGGATCGCTGATTGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCggtggtg                                                                                                                                 >  2:2523323/1‑140 (MQ=255)
         cggcggATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCggtggt                                                                                                                                  <  2:1972343/135‑1 (MQ=255)
         cggcggATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCggtggt                                                                                                                                  >  1:1972343/1‑135 (MQ=255)
          ggcggATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCt                                                                                                                            <  2:2135184/140‑1 (MQ=255)
           gcggATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCtt                                                                                                                           >  1:2292068/1‑140 (MQ=255)
              gATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGAGAAATCGGTGGTGGTGCTTTGc                                                                                                                        >  1:2436238/1‑140 (MQ=255)
                tCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGt                                                                                                                      <  1:3363462/140‑1 (MQ=255)
                tCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGt                                                                                                                      <  2:2605994/140‑1 (MQ=255)
                tCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAACCGGTGGTGGTGCTTTGCGt                                                                                                                      <  2:129888/140‑1 (MQ=255)
                      aTGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGAt                                                                                                                <  2:3469079/140‑1 (MQ=255)
                         ggcgggcgCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGt                                                                                                             >  1:3154654/1‑140 (MQ=255)
                           cgggcgCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGt                                                                                                                      <  1:167692/129‑1 (MQ=255)
                           cgggcgCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGt                                                                                                                      <  1:847383/129‑1 (MQ=255)
                             ggcgCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAg                                                                                                         >  1:1454560/1‑140 (MQ=255)
                              gcgcTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGt                                                                                                        >  2:644182/1‑140 (MQ=255)
                                 cTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGc                                                                                                     <  1:3578067/140‑1 (MQ=255)
                                 cTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGc                                                                                                     <  1:56959/140‑1 (MQ=255)
                                 cTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGc                                                                                                     <  1:2093069/140‑1 (MQ=255)
                                 cTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGc                                                                                                     <  2:70137/140‑1 (MQ=255)
                                  tttAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCATGCTGATTGTTCAGTCGCa                                                                                                    <  2:2858571/140‑1 (MQ=255)
                                        cTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCtt                                                                                              >  1:1098338/1‑140 (MQ=255)
                                           cTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTAt                                                                                           >  2:1197805/1‑140 (MQ=255)
                                           cTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTAt                                                                                           >  2:2804325/1‑140 (MQ=255)
                                               tttCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       <  1:1197805/140‑1 (MQ=255)
                                               tttCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       <  2:187388/140‑1 (MQ=255)
                                               tttCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       <  1:262766/140‑1 (MQ=255)
                                               tttCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       <  2:3439511/140‑1 (MQ=255)
                                               tttCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       <  2:1006249/140‑1 (MQ=255)
                                               tttCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       <  2:1095740/140‑1 (MQ=255)
                                                 tCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACg                                                                                                 <  2:966069/128‑1 (MQ=255)
                                                 tCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGt                                                                                       >  2:1489943/1‑138 (MQ=255)
                                                 tCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCt                                                                                     <  1:1547484/140‑1 (MQ=255)
                                                    gtggtgGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGAt                                                                                  >  1:759826/1‑140 (MQ=255)
                                                    gtggtgGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGAt                                                                                  <  1:644182/140‑1 (MQ=255)
                                                      ggtggGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTa                                                                                <  1:1224772/140‑1 (MQ=255)
                                                       gtggGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTaa                                                                               <  2:1658471/140‑1 (MQ=255)
                                                       gtggGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTaa                                                                               <  1:2796730/140‑1 (MQ=255)
                                                        tggGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTaaa                                                                              >  1:2392067/1‑140 (MQ=255)
                                                         gggggCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAg                                                                             <  1:1178053/140‑1 (MQ=255)
                                                         gggggCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAg                                                                             <  2:113503/140‑1 (MQ=255)
                                                          ggggCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAgg                                                                            <  2:1454560/140‑1 (MQ=255)
                                                          ggggCGCTGATTATTCAGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGa                                                                           >  2:1682796/1‑140 (MQ=255)
                                                           gggCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGa                                                                           <  1:1734817/140‑1 (MQ=255)
                                                            ggCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAg                                                                             >  1:324686/1‑137 (MQ=255)
                                                            ggCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAg                                                                          >  1:2136708/1‑140 (MQ=255)
                                                                cTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACg                                                                      <  1:2804325/140‑1 (MQ=255)
                                                                  gATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTa                                                                    >  2:1335113/1‑140 (MQ=255)
                                                                   attattCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAg                                                                   <  1:3440851/140‑1 (MQ=255)
                                                                     tattCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGcc                                                                 <  1:1004853/140‑1 (MQ=255)
                                                                         cAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGa                                                             <  2:1956097/140‑1 (MQ=255)
                                                                              gATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATaaaa                                                        >  2:441197/1‑140 (MQ=255)
                                                                               aTGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAAc                                                       >  1:2428279/1‑140 (MQ=255)
                                                                                tGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACg                                                      <  2:873437/140‑1 (MQ=255)
                                                                                 gAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGt                                                     >  1:1993712/1‑140 (MQ=255)
                                                                                 gAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGt                                                     >  2:2083117/1‑140 (MQ=255)
                                                                                 gAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGt                                                     >  2:918736/1‑140 (MQ=255)
                                                                                  aaCACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTa                                                    >  1:1378366/1‑140 (MQ=255)
                                                                                   acacCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTaa                                                   >  1:1016200/1‑140 (MQ=255)
                                                                                     acCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAAtt                                                 <  1:8349/140‑1 (MQ=255)
                                                                                      ccGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAAttt                                                >  1:2199287/1‑140 (MQ=255)
                                                                                      ccGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAAttt                                                >  2:3304237/1‑140 (MQ=255)
                                                                                      ccGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAAttt                                                >  2:2417923/1‑140 (MQ=255)
                                                                                      ccGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAGGAGTACGTAGCCGTGATAAAACGTAATTTg                                               >  1:194684/1‑140 (MQ=255)
                                                                                       cGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTg                                               <  1:2999864/140‑1 (MQ=255)
                                                                                        ggAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGAt                                                            <  1:258617/126‑1 (MQ=255)
                                                                                         gAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATCGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGcc                                             >  1:152154/1‑140 (MQ=255)
                                                                                          aaTTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCa                                            <  1:2916335/140‑1 (MQ=255)
                                                                                          aaTTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCa                                            <  2:2220679/140‑1 (MQ=255)
                                                                                          aaTTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCa                                            <  2:2434107/140‑1 (MQ=255)
                                                                                            ttttGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGc                                              >  1:936476/1‑136 (MQ=255)
                                                                                              ttGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACtga                                        <  2:2653554/140‑1 (MQ=255)
                                                                                                 cTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACt                                          <  2:1478510/135‑1 (MQ=255)
                                                                                                 cTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACt                                          >  1:1478510/1‑135 (MQ=255)
                                                                                                 cTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACt                                          <  2:2869632/135‑1 (MQ=255)
                                                                                                 cTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACt                                          >  1:2869632/1‑135 (MQ=255)
                                                                                                      gggCTTTCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCAcc                                <  1:451909/140‑1 (MQ=255)
                                                                                                            tCCGCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGc                          >  1:2238032/1‑140 (MQ=255)
                                                                                                               gCCAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTc                       <  2:796899/140‑1 (MQ=255)
                                                                                                                ccAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCt                      <  1:1888540/140‑1 (MQ=255)
                                                                                                                ccAGAGATGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCt                      <  1:3304237/140‑1 (MQ=255)
                                                                                                                    agaTGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTtgt                  <  1:1335113/140‑1 (MQ=255)
                                                                                                                    agaTGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTtgt                  <  1:2299215/140‑1 (MQ=255)
                                                                                                                    agaTGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTtgt                  >  1:268029/1‑140 (MQ=255)
                                                                                                                      aTGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTgtgt                >  2:3247249/1‑140 (MQ=255)
                                                                                                                       tGAACCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGtt               <  2:2956592/140‑1 (MQ=255)
                                                                                                                         aaCCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTgg             <  1:918736/140‑1 (MQ=255)
                                                                                                                         aaCCAGGTGGTGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTgg             <  1:996332/140‑1 (MQ=255)
                                                                                                                              ggtggtGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTgtgt                >  2:508345/1‑132 (MQ=255)
                                                                                                                              ggtggtGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGt           >  2:1421064/1‑137 (MQ=255)
                                                                                                                              ggtggtGAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTAt        >  2:2718424/1‑140 (MQ=255)
                                                                                                                               gtggtgAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATc       >  2:1572589/1‑140 (MQ=255)
                                                                                                                               gtggtgAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTgg             >  1:2541319/1‑133 (MQ=255)
                                                                                                                                tggtgAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCt      >  2:2585541/1‑140 (MQ=255)
                                                                                                                                tggtgAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCt      >  1:2847016/1‑140 (MQ=255)
                                                                                                                                  gtgAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCttt    >  1:413945/1‑140 (MQ=255)
                                                                                                                                   tgAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATCAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGt           >  2:839543/1‑132 (MQ=255)
                                                                                                                                    gAAATCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCTTTAc  >  2:3124579/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
GGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCTTTAC  >  NC_000913/4453374‑4453645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: