Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,508,973 C→A E281* (GAA→TAA)  yhfW ← putative mutase YhfW

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,508,9730CA100.0% 221.7 / NA 63E281* (GAA→TAA) yhfWputative mutase YhfW
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (34/29);  total (34/29)

CTCAACAAGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTCGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGCCTGCTTCATACAGTTTTTGTG  >  NC_000913/3508839‑3509104
                                                                                                                                      |                                                                                                                                   
cTCAACAAGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGa                                                                                                                                >  1:427818/1‑140 (MQ=255)
cTCAACAAGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGa                                                                                                                                >  1:360744/1‑140 (MQ=255)
  caacaaGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAgg                                                                                                                              <  1:648509/140‑1 (MQ=255)
  caacaaGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGCTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAgg                                                                                                                              <  1:596150/140‑1 (MQ=255)
    acaaGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGt                                                                                                                            >  2:135690/1‑140 (MQ=255)
      aaGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGa                                                                                                                          <  2:427818/140‑1 (MQ=255)
      aaGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGa                                                                                                                          <  1:515824/140‑1 (MQ=255)
            ggCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCa                                                                                                                    >  2:295036/1‑140 (MQ=255)
            ggCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCa                                                                                                                    >  2:766212/1‑140 (MQ=255)
             gCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCAt                                                                                                                   <  2:360744/140‑1 (MQ=255)
             gCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCAt                                                                                                                   >  1:519317/1‑140 (MQ=255)
                           aaCGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTAt                                                                                                     >  2:789887/1‑140 (MQ=255)
                           aaCGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTAt                                                                                                     >  1:134461/1‑140 (MQ=255)
                           aaCGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTAt                                                                                                     >  2:650235/1‑140 (MQ=255)
                             cGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATcc                                                                                                   >  1:496190/1‑140 (MQ=255)
                               aCCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATccac                                                                                                 <  1:210106/140‑1 (MQ=255)
                                   gCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGa                                                                                             >  1:349761/1‑140 (MQ=255)
                                   gCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGa                                                                                             >  2:367981/1‑140 (MQ=255)
                                          ttCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGcc                                                                                      >  1:29732/1‑140 (MQ=255)
                                            cGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAg                                                                                    >  2:662665/1‑140 (MQ=255)
                                              gCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCt                                                                                  <  1:789887/140‑1 (MQ=255)
                                               cATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTc                                                                                 <  1:650235/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  2:779209/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  2:29732/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  2:349761/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  1:295036/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  1:766212/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  2:793608/140‑1 (MQ=255)
                                                aTAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCa                                                                                <  2:412935/140‑1 (MQ=255)
                                                   aCGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGc                                                                             <  2:490236/140‑1 (MQ=255)
                                                           cGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGa                                                                     <  2:496190/140‑1 (MQ=255)
                                                                 ctGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGAttgttg                                                               >  1:3535/1‑140 (MQ=255)
                                                                   gCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCAATAATCCGCTGGCTACCCACCAGATTTGGCCAGCTCACGCCATAAGGATTGTTGAc                                                             <  2:776209/140‑1 (MQ=255)
                                                                       gACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGAtt                                                                   >  1:530350/1‑130 (MQ=255)
                                                                       gACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGAtt                                                                   <  2:530350/130‑1 (MQ=255)
                                                                       gACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGa                                                              <  2:888846/135‑1 (MQ=255)
                                                                       gACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGa                                                              >  1:888846/1‑135 (MQ=255)
                                                                        aCCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGatat                                                        >  2:280706/1‑140 (MQ=255)
                                                                         ccAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATc                                                       >  1:266506/1‑140 (MQ=255)
                                                                          cAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCt                                                      >  1:261570/1‑140 (MQ=255)
                                                                           aGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTg                                                     <  2:519317/140‑1 (MQ=255)
                                                                             cGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGcc                                                   >  1:487313/1‑140 (MQ=255)
                                                                              gAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCAGGCCATAAGGATTGTTGACGATATCTGCCa                                                  >  1:787400/1‑140 (MQ=255)
                                                                              gAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCa                                                  <  2:487313/140‑1 (MQ=255)
                                                                                    ggTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTAc                                            >  2:342669/1‑140 (MQ=255)
                                                                                     gTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTAcc                                           <  2:301810/140‑1 (MQ=255)
                                                                                           tGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAg                                     >  1:681575/1‑140 (MQ=255)
                                                                                                gTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACgg                                >  2:875621/1‑140 (MQ=255)
                                                                                                  tGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGtt                              >  2:122696/1‑140 (MQ=255)
                                                                                                  tGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGtt                              >  1:19916/1‑140 (MQ=255)
                                                                                                   ggTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTg                             >  1:743728/1‑140 (MQ=255)
                                                                                                   ggTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTg                             >  2:38588/1‑140 (MQ=255)
                                                                                                    gTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTgg                            >  2:632384/1‑140 (MQ=255)
                                                                                                    gTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTgg                            <  1:280706/140‑1 (MQ=255)
                                                                                                    gTGCAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTgg                            <  1:875621/140‑1 (MQ=255)
                                                                                                       cAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTgg                            <  1:851685/137‑1 (MQ=255)
                                                                                                       cAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTgg                            >  2:851685/1‑137 (MQ=255)
                                                                                                       cAAATAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCAc                         >  1:134160/1‑140 (MQ=255)
                                                                                                         aaTAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGc                       <  1:36323/140‑1 (MQ=255)
                                                                                                           tAAACGCCGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGCCt                     <  1:38588/140‑1 (MQ=255)
                                                                                                                 ccGTCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGCCTGCTTCa               <  1:833824/140‑1 (MQ=255)
                                                                                                                    tCGGATGGGTGTTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGCCTGCTTCATAc            >  1:491592/1‑140 (MQ=255)
                                                                                                                              gtTAAATTAGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGCCTGCTTCATACAGTTTTtgtg  >  2:382658/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                   
CTCAACAAGCCGGGCAAGGTTACGGTCAACGACCTGCAAACGTTCGGCATAACGTGCGACGTCTTCTGCATGACCAGCGAGGTCGGTTTCCTGAATGTTGGTGCAAATAAACGCCGTCGGATGGGTGTTAAATTCGTTGAGGGTGATATCCATAATCCGCTGGCTATCCACCAGATTTTGCCAGCTCACGCCATAAGGATTGTTGACGATATCTGCCACCTTACCCACCAGCACGGTTGGCACGCCTGCTTCATACAGTTTTTGTG  >  NC_000913/3508839‑3509104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: