BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,292,332	G→C	G331A (GGC→GCC)	yraK →	putative fimbrial adhesin YraK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,292,332	0	G	C	100.0%	471.7 / NA	128	G331A (GGC→GCC)	yraK	putative fimbrial adhesin YraK
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (61/67); total (61/67)

Only 100 of 130 total aligned reads displayed.

CAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTAACGCAACGCTTC  >  NC_000913/3292196‑3292467

cAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCAc                                                                                                                                      >  2:1242167/1‑140 (MQ=255)

   tACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGt                                                                                                                                   >  2:927642/1‑140 (MQ=255)

   tACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGt                                                                                                                                   >  2:1668717/1‑140 (MQ=255)

   tACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGt                                                                                                                                   >  2:1510905/1‑140 (MQ=255)

    aCAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCTCGTTGATCCTTCCGGGCATGCCa                                                                                                                                       <  2:86880/135‑1 (MQ=255)

    aCAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCTCGTTGATCCTTCCGGGCATGCCa                                                                                                                                       >  1:86880/1‑135 (MQ=255)

     cAACCTGGTCGCCAGGCGAATAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCa                                                                                                                                 <  1:488939/140‑1 (MQ=255)

     cAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCa                                                                                                                                 <  1:1164696/140‑1 (MQ=255)

     cAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCa                                                                                                                                 <  1:68776/140‑1 (MQ=255)

          tGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATg                                                                                                                            <  2:868795/140‑1 (MQ=255)

          tGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATg                                                                                                                            <  2:1481759/140‑1 (MQ=255)

          tGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATg                                                                                                                            <  1:927642/140‑1 (MQ=255)

            gTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATgcg                                                                                                                          >  2:1230677/1‑140 (MQ=255)

             tCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGTGCATGCCACCGTCAATATgcgc                                                                                                                         >  1:172074/1‑140 (MQ=255)

             tCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCa                                                                                                                                 <  2:978504/132‑1 (MQ=255)

             tCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCa                                                                                                                                 >  1:978504/1‑132 (MQ=255)

             tCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATgcgc                                                                                                                         >  1:1842232/1‑140 (MQ=255)

             tCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATgcgc                                                                                                                         >  2:69293/1‑140 (MQ=255)

              cGCCAGGCGAAGAAGCTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATgcgcg                                                                                                                        <  2:1187384/140‑1 (MQ=255)

               gCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCa                                                                                                                                       >  2:481634/1‑124 (MQ=255)

                ccAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATgcg                                                                                                                          <  1:240660/136‑1 (MQ=255)

                  aGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTg                                                                                                                    <  1:1639524/140‑1 (MQ=255)

                  aGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTg                                                                                                                    <  1:805229/140‑1 (MQ=255)

                  aGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTg                                                                                                                    <  1:568974/140‑1 (MQ=255)

                  aGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTg                                                                                                                    >  1:486422/1‑140 (MQ=255)

                  aGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTg                                                                                                                    >  1:419846/1‑140 (MQ=255)

                     cGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGcc                                                                                                                 <  1:1668717/140‑1 (MQ=255)

                            gTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAAt                                                                                                          <  2:1302696/140‑1 (MQ=255)

                            gTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAAt                                                                                                          <  1:1563533/140‑1 (MQ=255)

                            gTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCCCCTGGCCAGTTAAt                                                                                                          <  1:282389/140‑1 (MQ=255)

                              tCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCt                                                                                                        <  2:1608721/140‑1 (MQ=255)

                                 gACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGt                                                                                                     <  1:393444/140‑1 (MQ=255)

                                      tgtgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtg                                                                                                >  1:406277/1‑140 (MQ=255)

                                      tgtgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtg                                                                                                <  2:941334/140‑1 (MQ=255)

                                      tgtgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtg                                                                                                >  1:1842470/1‑140 (MQ=255)

                                       gtgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtgg                                                                                               >  2:1195288/1‑140 (MQ=255)

                                       gtgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtgg                                                                                               >  2:444015/1‑140 (MQ=255)

                                        tgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtggt                                                                                              <  2:1317021/140‑1 (MQ=255)

                                        tgCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCggtggt                                                                                              <  1:1345441/140‑1 (MQ=255)

                                             gATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCt                                                                                         <  1:788591/140‑1 (MQ=255)

                                              aTGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTg                                                                                        >  2:825269/1‑140 (MQ=255)

                                                gTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGa                                                                                      <  2:1842232/140‑1 (MQ=255)

                                                   ggTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAAc                                                                                   >  2:598859/1‑140 (MQ=255)

                                                       ttCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAAc                                                                                   >  2:720933/1‑136 (MQ=255)

                                                         cGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGaaa                                                                             >  1:1710996/1‑140 (MQ=255)

                                                           tATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAAt                                                                           >  2:833630/1‑140 (MQ=255)

                                                             ttGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAAttt                                                                         >  2:234388/1‑140 (MQ=255)

                                                                  aaTCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAggg                                                                    <  1:1353733/140‑1 (MQ=255)

                                                                    tctcGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGca                                                                  <  2:1802216/140‑1 (MQ=255)

                                                                     ctcGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGcac                                                                 >  1:849406/1‑140 (MQ=255)

                                                                      tcGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGcaca                                                                <  2:198070/140‑1 (MQ=255)

                                                                      tcGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGcaca                                                                <  2:656002/140‑1 (MQ=255)

                                                                       cggcggcggAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGca                                                                  >  1:1292904/1‑137 (MQ=255)

                                                                       cggcggcggAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGca                                                                  <  2:1292904/137‑1 (MQ=255)

                                                                        ggcggcggAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGTGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGc                                                              <  2:172074/140‑1 (MQ=255)

                                                                          cggcggAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGcca                                                            >  1:435691/1‑140 (MQ=255)

                                                                                   tGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCg                                                   <  1:734937/140‑1 (MQ=255)

                                                                                         tatTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCg                                             <  1:1469572/140‑1 (MQ=255)

                                                                                         tatTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCg                                             <  2:435691/140‑1 (MQ=255)

                                                                                         tatTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCg                                             <  2:1808050/140‑1 (MQ=255)

                                                                                           ttCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTg                                           <  1:833630/140‑1 (MQ=255)

                                                                                           ttCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTg                                           <  2:569784/140‑1 (MQ=255)

                                                                                            tCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGc                                          >  1:1564728/1‑140 (MQ=255)

                                                                                              cTTTTCAGGACCGGTACCCTCCCCGTTG‑TTCTTCCGGGCATGGCACCGTCAATAAGGCCGGCTGGGCCATTTATCTGGTCGGGGGGTGGGTGGAAACAAGAAAATTTCCAGGCACAAGCCCCATTACCGTCATCGTGCgg                                        <  2:406277/140‑1 (MQ=255)

                                                                                               ttttCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGt                                       >  2:1743966/1‑140 (MQ=255)

                                                                                               ttttCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGt                                       >  1:1604235/1‑140 (MQ=255)

                                                                                               ttttCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGt                                       >  1:1657668/1‑140 (MQ=255)

                                                                                                tttCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTa                                      <  1:1195288/140‑1 (MQ=255)

                                                                                                tttCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTa                                      <  1:1647385/140‑1 (MQ=255)

                                                                                                   cA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTaaaa                                   >  2:940087/1‑140 (MQ=255)

                                                                                                           gTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACg                            <  1:598859/140‑1 (MQ=255)

                                                                                                           gTATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACg                            <  2:419846/140‑1 (MQ=255)

                                                                                                            tATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCgg                                        <  2:134317/127‑1 (MQ=255)

                                                                                                            tATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCgg                                        >  1:134317/1‑127 (MQ=255)

                                                                                                            tATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGt                           >  2:1314333/1‑140 (MQ=255)

                                                                                                            tATCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGt                           >  2:1577813/1‑140 (MQ=255)

                                                                                                             aTCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGtt                          <  1:1012939/140‑1 (MQ=255)

                                                                                                             aTCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGtt                          <  2:811926/140‑1 (MQ=255)

                                                                                                             aTCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGtt                          <  1:1242167/140‑1 (MQ=255)

                                                                                                              tCCTTCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTg                         >  2:382453/1‑140 (MQ=255)

                                                                                                                  tCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGtt                     <  1:699834/140‑1 (MQ=255)

                                                                                                                  tCCCGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGtt                     <  2:1699824/140‑1 (MQ=255)

                                                                                                                   cccGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGttt                    >  1:1790844/1‑140 (MQ=255)

                                                                                                                    ccGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGtttt                   <  1:786640/140‑1 (MQ=255)

                                                                                                                     cGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTaaa                                    >  2:1876047/1‑122 (MQ=255)

                                                                                                                     cGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTaaa                                    <  1:1876047/122‑1 (MQ=255)

                                                                                                                     cGTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTg                  >  1:1259943/1‑140 (MQ=255)

                                                                                                                      gTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGa                 >  1:1415616/1‑140 (MQ=255)

                                                                                                                      gTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGa                 >  1:401233/1‑140 (MQ=255)

                                                                                                                      gTTGATCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGa                 >  1:1186738/1‑140 (MQ=255)

                                                                                                                          aTCCTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTaa             >  2:549957/1‑140 (MQ=255)

                                                                                                                            ccTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGtt                     >  2:1112440/1‑130 (MQ=255)

                                                                                                                            ccTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGtt                     <  1:1112440/130‑1 (MQ=255)

                                                                                                                             cTTCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTaacgc          <  1:444015/140‑1 (MQ=255)

                                                                                                                              ttCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTaacgca         >  1:448594/1‑140 (MQ=255)

                                                                                                                               tCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTaacgcaa        <  2:486422/140‑1 (MQ=255)

                                                                                                                               tCCGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTaacgcaa        <  1:69293/140‑1 (MQ=255)

                                                                                                                                ccGGGCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTaacgcaac       >  1:1102633/1‑140 (MQ=255)

                                                                                                                                   ggCATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTAACGCAACGCt    >  1:1006964/1‑140 (MQ=255)

                                                                                                                                     cATGCCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTAACGCAACGCTTc  <  2:857226/140‑1 (MQ=255)

CAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCA‑GAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAAAAGAAGACGTTGCGTTTTGATTAACGCAACGCTTC  >  NC_000913/3292196‑3292467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`