BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,503,462	G→T	intergenic (‑31/‑596)	insG ← / → yjhB	KpLE2 phage‑like element; IS4 putative transposase/putative sialic acid transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,503,462	0	G	T	100.0%	523.2 / NA	147	intergenic (‑31/‑596)	insG/yjhB	KpLE2 phage‑like element; IS4 putative transposase/putative sialic acid transporter
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (74/73); total (74/73)

Only 100 of 147 total aligned reads displayed.

GGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTT  >  NC_000913/4503326‑4503598

ggcaaCGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGAt                                                                                                                                       >  2:505438/1‑140 (MQ=255)

     cGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTa                                                                                                                                  >  1:1005948/1‑140 (MQ=255)

       agagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTaca                                                                                                                                <  1:1006855/140‑1 (MQ=255)

       agagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTaca                                                                                                                                <  2:1378680/140‑1 (MQ=255)

       agagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACCGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTaca                                                                                                                                <  2:1864514/140‑1 (MQ=255)

       agagaTGAGTTCGGGGTCGAAGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTaca                                                                                                                                <  1:1325969/140‑1 (MQ=255)

        gagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCTTGATTCTTacac                                                                                                                               <  1:1491620/140‑1 (MQ=255)

        gagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTacac                                                                                                                               <  1:408182/140‑1 (MQ=255)

        gagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTacac                                                                                                                               <  1:505438/140‑1 (MQ=255)

        gagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTacac                                                                                                                               <  1:736374/140‑1 (MQ=255)

           aTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGc                                                                                                                            <  2:778092/140‑1 (MQ=255)

           aTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGc                                                                                                                            >  2:20583/1‑140 (MQ=255)

           aTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGc                                                                                                                            >  2:837136/1‑140 (MQ=255)

                ttCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTg                                                                                                                       >  2:1468816/1‑140 (MQ=255)

                 tCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTgg                                                                                                                      >  1:1799122/1‑140 (MQ=255)

                  cGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGa                                                                                                                     >  2:1692785/1‑140 (MQ=255)

                  cGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGa                                                                                                                     >  2:359564/1‑140 (MQ=255)

                  cGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGa                                                                                                                     <  1:297104/140‑1 (MQ=255)

                  cGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAACCACTGGa                                                                                                                     <  1:276016/140‑1 (MQ=255)

                   ggggTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGAt                                                                                                                    <  2:258582/140‑1 (MQ=255)

                          aGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTacac                                                                                                                               <  2:596269/122‑1 (MQ=255)

                          aGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGt                                                                                                                <  2:866092/137‑1 (MQ=255)

                          aGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGt                                                                                                                >  1:866092/1‑137 (MQ=255)

                           ggTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAAc                                                                                                            <  2:988326/140‑1 (MQ=255)

                           ggTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAAc                                                                                                            <  1:1727695/140‑1 (MQ=255)

                           ggTAATCCCCAAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAAc                                                                                                            <  1:1196861/140‑1 (MQ=255)

                              aaTCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAAc                                                                                                            <  1:1108246/137‑1 (MQ=255)

                               aTCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGAt                                                                                                        >  1:609906/1‑140 (MQ=255)

                                   cccAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCtt                                                                                                    <  1:397697/140‑1 (MQ=255)

                                     cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAAc                                                                                                            <  1:1003666/130‑1 (MQ=255)

                                     cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAAc                                                                                                            >  2:1003666/1‑130 (MQ=255)

                                     cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTaa                                                                                                  >  1:1301387/1‑140 (MQ=255)

                                     cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTaa                                                                                                  >  1:926817/1‑140 (MQ=255)

                                     cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTaa                                                                                                  <  1:677174/140‑1 (MQ=255)

                                     cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTaa                                                                                                  <  1:661043/140‑1 (MQ=255)

                                          aaGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGAt                                                                                             <  1:1807515/140‑1 (MQ=255)

                                          aaGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGAt                                                                                             <  2:1705729/140‑1 (MQ=255)

                                           aGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATc                                                                                            <  2:819081/140‑1 (MQ=255)

                                              cAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGc                                                                                         >  1:539954/1‑140 (MQ=255)

                                               aGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCa                                                                                        <  2:445144/140‑1 (MQ=255)

                                                 tGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCAtt                                                                                      <  1:722464/140‑1 (MQ=255)

                                                    gTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAAt                                                                                   <  2:895985/140‑1 (MQ=255)

                                                    gTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAAt                                                                                   <  1:478269/140‑1 (MQ=255)

                                                    gTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAAt                                                                                   >  2:50490/1‑140 (MQ=255)

                                                     ttACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATc                                                                                  <  2:1180280/140‑1 (MQ=255)

                                                      tACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCt                                                                                 >  1:1354237/1‑140 (MQ=255)

                                                      tACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCt                                                                                 <  1:20583/140‑1 (MQ=255)

                                                       aCGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCtt                                                                                >  2:1190265/1‑140 (MQ=255)

                                                       aCGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCtt                                                                                >  2:1661642/1‑140 (MQ=255)

                                                       aCGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCtt                                                                                >  1:863103/1‑140 (MQ=255)

                                                        cGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTg                                                                               <  2:375777/140‑1 (MQ=255)

                                                             agaATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTTATCTTGGTTCt                                                                          >  1:90223/1‑140 (MQ=255)

                                                                aTCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgt                                                                       <  2:1005948/140‑1 (MQ=255)

                                                                  cGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGATCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgtgt                                                                     <  2:687813/140‑1 (MQ=255)

                                                                  cGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgtgt                                                                     <  1:359564/140‑1 (MQ=255)

                                                                  cGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgtgt                                                                     <  2:539954/140‑1 (MQ=255)

                                                                  cGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgtgt                                                                     <  2:1308098/140‑1 (MQ=255)

                                                                  cGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATAGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgtgt                                                                     <  2:1590571/140‑1 (MQ=255)

                                                                       cGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTa                                                                >  1:1301586/1‑140 (MQ=255)

                                                                         ggATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAAc                                                              >  2:787329/1‑140 (MQ=255)

                                                                          gATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACa                                                             <  2:863103/140‑1 (MQ=255)

                                                                          gATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACa                                                             <  1:1127406/140‑1 (MQ=255)

                                                                               cAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTa                                                        >  1:850452/1‑140 (MQ=255)

                                                                                  aTCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCa                                                     >  2:1079822/1‑140 (MQ=255)

                                                                                   tCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGGGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAg                                                    <  2:1507424/140‑1 (MQ=255)

                                                                                    cAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGc                                                   <  1:1190265/140‑1 (MQ=255)

                                                                                      agagCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTa                                                 >  2:667090/1‑140 (MQ=255)

                                                                                        agCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATc                                                      <  2:1475713/133‑1 (MQ=255)

                                                                                        agCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATc                                                      >  1:1475713/1‑133 (MQ=255)

                                                                                        agCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACa                                               >  2:68739/1‑140 (MQ=255)

                                                                                         gCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACaa                                              >  1:1522362/1‑140 (MQ=255)

                                                                                         gCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCT‑‑GTTCTGGTGTTTGTAACAAACTATCAGCTACaaaa                                            <  1:1864694/140‑1 (MQ=255)

                                                                                            tGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACaaaaa                                           >  1:1372945/1‑140 (MQ=255)

                                                                                            tGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACaaaaa                                           >  1:1312630/1‑140 (MQ=255)

                                                                                              tCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACaaaatat                                         >  2:1330458/1‑137 (MQ=255)

                                                                                              tCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAata                                         >  1:463426/1‑140 (MQ=255)

                                                                                              tCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAata                                         >  1:170471/1‑140 (MQ=255)

                                                                                              tCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAata                                         >  1:1179848/1‑140 (MQ=255)

                                                                                                  aTGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCt                                     <  2:427421/140‑1 (MQ=255)

                                                                                                  aTGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCt                                     <  1:1730837/140‑1 (MQ=255)

                                                                                                   tgtgCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTc                                    >  1:967905/1‑140 (MQ=255)

                                                                                                   tgtgCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTc                                    >  2:1315933/1‑140 (MQ=255)

                                                                                                        aTAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                               >  2:1100285/1‑140 (MQ=255)

                                                                                                        aTAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                               >  1:608595/1‑140 (MQ=255)

                                                                                                        aTAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                               >  1:284619/1‑140 (MQ=255)

                                                                                                        aTAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                               >  2:653692/1‑140 (MQ=255)

                                                                                                        aTAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                               >  1:1362849/1‑140 (MQ=255)

                                                                                                        aTAAAAAAATCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                               >  2:1517814/1‑140 (MQ=255)

                                                                                                             aaaaTCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGAc                          >  2:1841223/1‑140 (MQ=255)

                                                                                                             aaaaTCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGAc                          <  2:827908/140‑1 (MQ=255)

                                                                                                               aaTCCGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACAt                        <  1:300739/140‑1 (MQ=255)

                                                                                                                   cGGAAACAAGTGAGCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGt                    <  2:1362849/140‑1 (MQ=255)

                                                                                                                                gCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGtt       <  1:1692785/140‑1 (MQ=255)

                                                                                                                                gCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGtt       <  2:850452/140‑1 (MQ=255)

                                                                                                                                gCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGtt       <  2:608595/140‑1 (MQ=255)

                                                                                                                                gCGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGtt       <  1:1079822/140‑1 (MQ=255)

                                                                                                                                 cGTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGttt      >  1:803202/1‑140 (MQ=255)

                                                                                                                                  gTTTCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGtttt     <  2:170471/140‑1 (MQ=255)

                                                                                                                                   tttCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCT‑GTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGt   >  1:1401059/1‑140 (MQ=255)

                                                                                                                                     tCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGtt  <  2:1301586/140‑1 (MQ=255)

GGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTT  >  NC_000913/4503326‑4503598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`