BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	375102 =	NA (NA)	41 (0.360)	17/216	4.3	NA	noncoding (17/36 nt)	other	REP31d
*	?	NC_000913	377351 =	NA (NA)	41 (0.360)	17/216	4.3	NA	noncoding (16/37 nt)	other	REP32a
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 138 total aligned reads displayed.

CGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGAT  >  NC_000913/374963‑375239

cGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑t‑t                                                                                                                                            >  1:1797437/1‑140 (MQ=255)

   aTGGCGTGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGc                                                                                                                                        >  2:2413863/1‑140 (MQ=39)

     ggCGTGAGAATTTGTAGGTCTGATAAGACGCA‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGt                                                                                                                                      <  2:1000652/140‑1 (MQ=37)

       cGTGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCg                                                                                                                                    <  1:1108668/140‑1 (MQ=37)

         tGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCa                                                                                                                                  <  2:1332332/140‑1 (MQ=35)

          gagaATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATTAGACGCGCA‑A‑AGCGTCGCa                                                                                                                                  >  2:2289254/1‑140 (MQ=11)

          gagaATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCAt                                                                                                                                 <  1:62776/140‑1 (MQ=34)

          gagaATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCAt                                                                                                                                 <  1:1706967/140‑1 (MQ=34)

            gaATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCa                                                                                                                               <  2:490630/140‑1 (MQ=34)

            gaATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCa                                                                                                                               <  2:1797437/140‑1 (MQ=34)

               tttGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGc                                                                                                                            <  2:1228876/140‑1 (MQ=34)

                 tGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCAt                                                                                                                          <  1:2363884/140‑1 (MQ=34)

                 tGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCAt                                                                                                                          <  2:1146456/140‑1 (MQ=34)

                      gccTGATAAGACGCGCAAAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTgc                                                                                                                      <  2:1596634/138‑1 (MQ=11)

                                aCGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCGTCTGCGCACGACTGcc                                                                                                           >  2:2314258/1‑140 (MQ=21)

                                 cgcg‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCg                                                                                                          >  1:950918/1‑140 (MQ=34)

                                   cg‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGa                                                                                                        >  1:161248/1‑140 (MQ=34)

                                      ttAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                                                                      >  2:846202/1‑140 (MQ=34)

                                      ttAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATg                                                                                                      >  1:2016562/1‑140 (MQ=34)

                                       tAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc                                                                                                     <  1:749112/140‑1 (MQ=34)

                                         gCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcgg                                                                                                   <  2:2016562/140‑1 (MQ=34)

                                             cGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                                                                                               <  1:505876/140‑1 (MQ=35)

                                                 tCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACg                                                                                           <  2:97370/140‑1 (MQ=37)

                                                  cAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGc                                                                                          <  1:2426217/140‑1 (MQ=38)

                                                   aGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGcc                                                                                         >  2:1161955/1‑140 (MQ=37)

                                                   aGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGcc                                                                                         >  2:22787/1‑140 (MQ=37)

                                                   aGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGcc                                                                                         >  1:327139/1‑140 (MQ=37)

                                                      cATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTa                                                                                      >  2:561092/1‑140 (MQ=17)

                                                       aTCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTAt                                                                                     <  1:22787/140‑1 (MQ=38)

                                                        tCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc                                                                                    <  2:1348641/140‑1 (MQ=38)

                                                         cTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATcc                                                                                   <  2:2389040/140‑1 (MQ=38)

                                                            cgcACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                                >  2:1643495/1‑140 (MQ=37)

                                                               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                                                                                              >  2:335714/1‑123 (MQ=37)

                                                               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                                                                                              <  1:335714/123‑1 (MQ=37)

                                                               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                                                             >  1:1322168/1‑140 (MQ=37)

                                                               aCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTa                                                                             >  1:2087205/1‑140 (MQ=37)

                                                                cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTAc                                                                            >  1:1044580/1‑140 (MQ=37)

                                                                cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                            >  2:2126241/1‑140 (MQ=37)

                                                                cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                            >  2:1015136/1‑140 (MQ=37)

                                                                cGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                            >  1:606738/1‑140 (MQ=37)

                                                                 gACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                           <  2:1262179/140‑1 (MQ=37)

                                                                   cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGTCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg                                                                         <  1:1755266/140‑1 (MQ=18)

                                                                   cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg                                                                         >  1:1348641/1‑140 (MQ=38)

                                                                      ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTgg                                                                      >  2:1483000/1‑140 (MQ=40)

                                                                      ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGC‑‑A‑A‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  2:1124737/140‑1 (MQ=14)

                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  1:359071/140‑1 (MQ=40)

                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  1:1893817/140‑1 (MQ=40)

                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  1:494246/140‑1 (MQ=40)

                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  2:606738/140‑1 (MQ=40)

                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  1:2010016/140‑1 (MQ=40)

                                                                        ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg                                                                    <  1:2126241/140‑1 (MQ=40)

                                                                         gATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcgc                                                                   <  1:2355949/140‑1 (MQ=40)

                                                                          aTGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGcgcg                                                                  <  1:1483000/140‑1 (MQ=40)

                                                                           tGCGGCGTGAACGCCTTATCCGGTCTACACTTCGC‑CCATAAACCGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgag                                                                >  1:1809231/1‑140 (MQ=11)

                                                                            gcggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgag                                                                <  1:1711813/140‑1 (MQ=255)

                                                                            gcggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgag                                                                <  2:864761/140‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                               <  1:1117782/140‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCggga                                                               >  2:494246/1‑140 (MQ=17)

                                                                                cgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAg                                                                                                                              >  2:1379126/1‑74 (MQ=35)

                                                                                cgTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga                                                               <  1:1838544/137‑1 (MQ=255)

                                                                                    aaCGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTa                                                        <  1:1244639/140‑1 (MQ=255)

                                                                                          ttATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTg                                                  >  1:641503/1‑140 (MQ=255)

                                                                                              ccGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                              <  1:443298/140‑1 (MQ=255)

                                                                                               cGGCCTACGTATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                             <  2:901138/140‑1 (MQ=255)

                                                                                                 gCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAc                                           <  2:327139/140‑1 (MQ=255)

                                                                                                  ccTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGAcg                                          >  1:1579454/1‑140 (MQ=255)

                                                                                                     aCGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGt                                       <  1:1643495/140‑1 (MQ=255)

                                                                                                     aCGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGt                                       >  2:82254/1‑140 (MQ=255)

                                                                                                     aCGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGt                                       <  2:641503/140‑1 (MQ=255)

                                                                                                          tGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCg                                  <  2:1461744/140‑1 (MQ=40)

                                                                                                           ggCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCa                                                                                                                   >  2:237257/1‑58 (MQ=35)

                                                                                                               cgGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCa                             >  2:476112/1‑140 (MQ=40)

                                                                                                                gggAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                             >  2:1164904/1‑123 (MQ=40)

                                                                                                                gggAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAg                                             <  1:1164904/123‑1 (MQ=255)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:2450603/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:257360/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:2297837/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:2256257/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:224777/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:962446/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTCCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:400430/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  2:962870/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  1:1532574/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  1:631134/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  2:1576553/8‑140 (MQ=255)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  1:2009760/8‑140 (MQ=255)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  2:559785/8‑140 (MQ=255)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCG‑CAA‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt                            >  1:1547318/8‑140 (MQ=11)

                                                                                                                 gtaagccgTAGGCCTGATAAGACGCG‑C‑AAAGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATc                           >  2:181722/8‑140 (MQ=11)

                                                                                                                 ggAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                                                                                              <  1:1629588/73‑1 (MQ=34)

                                                                                                                  taagccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                          >  1:2224109/7‑140 (MQ=255)

                                                                                                                  taagccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTACCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                          >  1:2207616/7‑140 (MQ=255)

                                                                                                                  taaaccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                          >  1:1706568/7‑140 (MQ=255)

                                                                                                                  taaaccgTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                          >  1:1006208/7‑140 (MQ=255)

                                                                                                                   aagccgTAGGCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCa                          >  1:1502454/6‑140 (MQ=11)

                                                                                                                       tGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCAt                     <  1:476112/140‑1 (MQ=37)

                                                                                                                           ggCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCAT‑GGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                 <  1:962870/140‑1 (MQ=11)

                                                                                                                           ggCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                 <  2:1170415/140‑1 (MQ=37)

                                                                                                                            gCCTGATAAGACGCGCA‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                 <  2:1733138/140‑1 (MQ=255)

                                                                                                                            gCCTGATAAGACGCGCA‑A‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgc                 <  2:1109244/140‑1 (MQ=255)

CGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCG‑TTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCG‑T‑T‑AGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGAT  >  NC_000913/374963‑375239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.