| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 501,564 | 0 | A | C | 27.7% | 118.1 / 26.8 | 65 | *559E (TAA→GAA) | ybaL | putative transporter YbaL |
| Reads supporting (aligned to +/- strand): ref base A (43/4); new base C (0/18); total (43/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGG > NC_000913/501426‑501701 | ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTAc > 1:101103/1‑140 (MQ=255) gTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCg > 1:1960266/1‑140 (MQ=255) tATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTc > 2:521149/1‑140 (MQ=255) aTCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTca < 2:1749095/140‑1 (MQ=255) tcgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTcac < 1:859113/140‑1 (MQ=255) cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTcacc > 1:2116969/1‑140 (MQ=255) cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTcacc > 2:1269324/1‑140 (MQ=255) cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTcacc > 1:2043232/1‑140 (MQ=255) ttCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTAcc > 2:980286/1‑126 (MQ=255) ttCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTAcc < 1:980286/126‑1 (MQ=255) ttCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑Ca > 1:1498932/1‑140 (MQ=255) aTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGc > 1:236497/1‑140 (MQ=255) ttCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCcag > 1:649108/1‑140 (MQ=255) tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCcagc > 1:37439/1‑140 (MQ=255) cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCcagca > 1:695537/1‑140 (MQ=255) cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCcagca > 1:513332/1‑140 (MQ=255) cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTcc > 2:2214906/1‑140 (MQ=255) cccttCTGGCTTTTGGCTCTGGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACTTATTTTTCATTTTTTCCACCCGC‑CAACCCCCGTTTCCCCCGTCACCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTcc < 2:340785/136‑1 (MQ=25) cATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAg > 2:373040/1‑140 (MQ=255) aTCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGc > 1:1364351/1‑140 (MQ=255) tCTGGCTTTTGGCTCTCGATGCCTGATGCGCCGCTGGCGCGTCTTATCATGCCTACATTTTTTTCATATTTTACACCCGG‑CACCCCCCGTTTCCCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCa < 2:1876297/140‑1 (MQ=37) tcGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAttt > 1:1259543/1‑140 (MQ=255) cGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTc > 1:1538953/1‑140 (MQ=255) tGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCCCCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACg < 2:2116969/140‑1 (MQ=255) gCCTGATGCGCCGCTGGCGCGTTTTATCATCCCTACATATTTTTCATTTTTTACCCCCGC‑CAACCCCCGTTTCCCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGc < 2:37439/140‑1 (MQ=255) gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATTTTTTTCATATTTTACATCCGG‑CACCCCCCGTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGc < 1:2181667/140‑1 (MQ=38) cTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTc > 1:2402214/1‑140 (MQ=255) gATGCGCCGCTGGCGCGTTTTATCATCCCTAAATTTTTTTCATTTTTTCCACCCGG‑AACCCCCCTTTCCCCCCGTCCCCCCCC‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc < 2:513332/140‑1 (MQ=255) gtGCGACGCTGGCGCGTCTTATCATCCCTACATATTTTTAATATTTTACATCCGA‑CACCCACCTTTTCCCCCGTCACCCCCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGcc < 1:2286305/139‑1 (MQ=255) gggCGAGGCGGGCGCTTCTTATCATCCCTACTTTTTTTTAATATTTCCCACCCGC‑CACCCCTCTTTTCCCCCCCCCCCCCCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGcc < 2:2402214/138‑1 (MQ=255) aTGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CACCCCCCGTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGcc < 1:1934821/140‑1 (MQ=255) gACGGTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCCCCGTTTCCCCCGTCCCCACCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATc < 1:711161/140‑1 (MQ=255) gACGCTGGCGCGTCTTATCATCCCTACATTTTTTTCATTTTTTCCATCCGG‑CACCCCCCGTTTCCCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATc < 1:2214906/140‑1 (MQ=255) tGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCCCCGTTTCCCCCGTCCCCACCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTACAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTAc < 1:1269324/140‑1 (MQ=255) gggCGCGTCTTATCTTGCCTACTTTTTTTTCATTTTTTACACCCGG‑CACCCCCCTTTTCCCCCGCCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTAc < 2:882552/139‑1 (MQ=255) gcgcGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCt > 1:1697453/1‑140 (MQ=255) tATCATGCCTACATTTTTTTCATATTTTACCCCCGC‑CACCCCCCTTTTCCCCCGCCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGca < 2:223422/140‑1 (MQ=255) tCATGCCTACATTTTTTTCATATTTTACACCCGG‑CAACCCCCGTTTCCCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc < 2:2043232/140‑1 (MQ=255) tCATGCCTACATATTTTTCATATTTTACATCCGC‑CACCCACCGTTTCCCCCGTCCCCCCCC‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc < 1:1809431/140‑1 (MQ=255) tGCCTACTTTTTTTTCATTTTTTACACCCGC‑CAACCCCCTTTTCCCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg < 2:990531/140‑1 (MQ=255) ccTACTTTTTTTTAATTTTTTACACCCGG‑CACCCCCCGTTTACCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt < 2:1498932/140‑1 (MQ=255) ccTACATTTTTTTCATATTTTACACCCGG‑CACCCCCCGTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt < 1:710918/140‑1 (MQ=255) ccTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTTACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt > 1:166450/1‑140 (MQ=255) ccTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCGATCACTACCTGATTCGCACCACGtt > 1:1995186/1‑140 (MQ=255) ccTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt > 1:683374/1‑140 (MQ=255) ccTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt > 1:1394539/1‑140 (MQ=255) ctcatttttttttattttttaACTCCGGCCAACCCCTTTTCCCCCCGACACCCCCC‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt < 2:2381078/133‑1 (MQ=255) cTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTc > 1:223422/1‑140 (MQ=255) cTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTc > 2:1371554/1‑140 (MQ=255) tACATTTTTTTCATTTTTTACACCCGG‑CAACCCCCGTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCg < 1:12936/140‑1 (MQ=255) tACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCg > 1:2228682/1‑140 (MQ=255) tcATTTTTTTCATGTTTTAC‑TCCGGCCAACCACGGTTTCCCCCGACACCCCTT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 1:1235386/139‑1 (MQ=255) acttttttttCATTTTTTACACCCGG‑CACCCCCCTTTTCCCCCGCCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 2:967852/135‑1 (MQ=255) aaatatTTTTCATATTTTACACCCGG‑CAACCCCCGTTTCCCCCGTCACCACCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 2:149453/138‑1 (MQ=255) aCATTTTTTTCATATTTTACACCCGC‑CACCCCCCTTTTCCCCCTCCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 2:94093/140‑1 (MQ=255) aCATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg > 1:1192700/1‑140 (MQ=255) cATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGt > 2:203897/1‑140 (MQ=255) cATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGt > 1:906137/1‑140 (MQ=255) tttttCATATTTTCCCTCCGG‑CACCCCCCTTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGata < 2:1868499/140‑1 (MQ=255) tttttAATATTTTCCACCCGG‑CTCCCACCGTTCCCCCCGTCCCCACCC‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGata < 2:1356856/140‑1 (MQ=255) ttttCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat > 1:967852/1‑140 (MQ=255) ttttCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat > 1:94093/1‑140 (MQ=255) ttttCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCAGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat > 2:182330/1‑140 (MQ=255) tttCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGAtata > 1:1112803/1‑140 (MQ=255) tCATTTTTTACACCCGG‑CACCCGCCGTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACg < 1:322209/140‑1 (MQ=255) cATTTTTTACATCCGG‑CACCCCCCGTTTCCCCCGTCCCCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCGATCACTACCTGATTCGCACCACGTTCGGTGATATACGc < 2:1995186/140‑1 (MQ=255) tatTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCa > 1:781752/1‑140 (MQ=255) ttttcACACCCGC‑CACCCACGGTTTCCCCCGTCCCCCCCT‑CTCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCAc < 1:373040/139‑1 (MQ=255) tccacccGC‑CACCCCCCTTTTCCCCCGTCCCCCCCC‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa < 2:1394539/135‑1 (MQ=255) tACATCCGG‑CAACCCCCGTTTCCCCCGTCACCCCCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa < 2:683374/140‑1 (MQ=255) tcctCCGG‑GGACCACCATTTGCCCCTCCCCCCCCCCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCGCTTCa < 2:228743/137‑1 (MQ=255) cccGG‑CACCCCCCTTTTCCCCCGTCCCCCCCC‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGt < 2:518476/139‑1 (MQ=255) cccGG‑CACCCACCTTTTCCCCCGTCACCCCCT‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGt < 2:383366/139‑1 (MQ=255) cGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCa > 1:383366/1‑140 (MQ=255) cGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCa > 1:518476/1‑140 (MQ=255) g‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa > 1:1506475/1‑140 (MQ=255) g‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGGGATATACGCCACTTCATCGTCATa > 1:228743/1‑140 (MQ=255) ccGTTCCCCCGGTCCCCTCCC‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcg < 2:2107145/140‑1 (MQ=255) gTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGcgcg > 2:191866/1‑140 (MQ=255) gTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGcgcg > 2:846158/1‑140 (MQ=255) tttCCCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATaa < 1:1687001/131‑1 (MQ=255) tttACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATaa > 2:1687001/1‑131 (MQ=255) ttACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTTCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCggg > 2:550500/1‑140 (MQ=255) | TTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGG‑CAACCACCGTTTACCCCGTCACCACCT‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGG > NC_000913/501426‑501701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |