| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,550,663 | 0 | A | C | 30.8% | 130.3 / 33.4 | 78 | N68T (AAC→ACC) | fdnH | formate dehydrogenase N subunit beta |
| Reads supporting (aligned to +/- strand): ref base A (46/8); new base C (0/24); total (46/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGCCC > NC_000913/1550524‑1550798 | cAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATaa < 2:1257154/140‑1 (MQ=255) ggTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAAcc > 1:4974/1‑140 (MQ=255) tGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAAcccc > 1:1977138/1‑140 (MQ=255) tGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAAcccc > 1:2050866/1‑140 (MQ=255) gCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCccg > 1:1354653/1‑140 (MQ=255) tGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCccgccg > 1:1528874/1‑140 (MQ=255) aCAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTg > 1:147031/1‑140 (MQ=255) cAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGa > 1:120248/1‑140 (MQ=255) cAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGcc > 1:1382022/1‑140 (MQ=255) cAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGGGGGGCACTGCGTG‑GGGTTTTACGATACCCCCGCCGATCTGAGCGcc < 2:1622363/140‑1 (MQ=255) cAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGGGGGGCACTGCGTC‑GGGTTTTACGATAACCCCGCCGATCTGAGCGcc < 1:220106/140‑1 (MQ=255) cAGAAGTCGAAAAACTTATCGACTTTTCCCCCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACGGCGTC‑GGGTTTTACGATACCCCCGCCGATCTGAGCGcc < 2:2050866/140‑1 (MQ=37) cAGAAGTCGAAAAACTTATCGACGTTTCCACCTGTATGGGCTGTAAAGCTTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACGGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGcc < 2:864259/140‑1 (MQ=255) aaaaaGTCGAAAAACTTATCGCGGTTTCCACCTGTACCGGCTGTAAAGCCTGACAGGGGGCGTGTTGGGAGTGAACCGA‑CATCCGTGATGAAGGGGGGCCCTGCGTG‑GGGGTTTACGATACCCCCGCCGATCTGAGCGcc < 2:4974/137‑1 (MQ=255) aaGAAGTGGCGAAACTCATCGACGTTACCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGcc > 1:70272/2‑140 (MQ=21) aaaaTTTATCGCCTTTTCCCCCTGTACCGGCTGTAACGCCTGTAAGGTGGCGTTTGCGGAG‑GGAACCACCCCCCGTGAAGAAGGGGGGAACGGGGTC‑GGGGTTTAGGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGa < 2:2200392/140‑1 (MQ=255) aTCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGAt > 2:1149176/1‑140 (MQ=255) ccACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGc > 2:2386457/1‑140 (MQ=255) cACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCg > 1:605559/1‑140 (MQ=255) aTCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGa > 2:1455197/1‑140 (MQ=255) tCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGaa > 1:2292093/1‑140 (MQ=255) ggCTGTAAAGCCTGTCGGGGGGGGTGTTGGGAGTGGAACGA‑CATCGGTGATGAAGGGGGGCACTGCGTG‑GGGGTTTACGAAACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACa < 2:120248/140‑1 (MQ=255) tGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGaa > 1:943453/1‑140 (MQ=255) tAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg > 2:1524319/1‑140 (MQ=255) tAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg > 1:779836/1‑140 (MQ=255) tAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg > 2:907828/1‑140 (MQ=255) tAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg > 1:1326391/1‑140 (MQ=255) aaaaGCCTGTCGGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAGGGGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg < 2:1354653/139‑1 (MQ=255) aaaGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACgg > 2:2262016/1‑140 (MQ=255) aaaGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACgg > 2:1650866/1‑140 (MQ=255) tgacAGGTGGCGTGTTCGGCGGGGAACGA‑CATCCGTGATAAACTGGGGCACTGCGTC‑GGGGGTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTAATGCGCTCTAGCGAAACCGAACAGAACGGCAAGCt > 2:1012268/4‑140 (MQ=255) tGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAg < 1:603058/138‑1 (MQ=255) tGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAg > 2:603058/1‑138 (MQ=255) tGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCt > 2:525456/1‑140 (MQ=255) tcgggTGGCGTGTTGGGAGTGGAACGA‑CACCCGTGATGAGGTGGGGCACTGCGTG‑GGGTTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTgg < 1:460673/137‑1 (MQ=255) tCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCTCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTgg > 1:1330093/1‑140 (MQ=255) cAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGa > 2:75205/1‑140 (MQ=255) gggCGTGTGGGGAGTGGACCGA‑CATCGGTGATGAAGGGGGGCACTGCGTG‑GGGTTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTgg < 2:1535687/139‑1 (MQ=255) gggCGTGTCGGGAGGGGAACGA‑CACCGGTGATGAAGTGGGGCCCTGCGTG‑GGGGTTTACAATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTgg < 2:2292093/139‑1 (MQ=255) gggAGTGGAACGA‑CATCCGTGATGAAGGGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGt < 1:1932425/139‑1 (MQ=255) cGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGt < 1:1524319/140‑1 (MQ=255) cGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGt < 1:2044425/140‑1 (MQ=255) cGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGt > 2:1291127/1‑140 (MQ=255) cGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGt > 2:1809802/1‑140 (MQ=255) gAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGTTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTaa < 1:2262016/140‑1 (MQ=255) aGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTCGGGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTaa > 2:1046964/1‑140 (MQ=255) aGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTaaa < 1:217109/140‑1 (MQ=255) aGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTaaa > 1:1672292/1‑140 (MQ=255) tGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa > 1:1762660/1‑140 (MQ=255) gggAACGA‑CCTCCGTGATGAGGGGGGGCACTGCGGG‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 2:779836/139‑1 (MQ=255) gggAACGA‑CACCCGTGATGAAGGGGGGCCCGGGGGG‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 2:1666668/139‑1 (MQ=255) gAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGTTTTACAATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACg < 1:1637119/140‑1 (MQ=255) gAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACg < 1:880209/140‑1 (MQ=255) gAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACg < 1:907828/140‑1 (MQ=255) aaCGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACgg > 1:2450568/1‑140 (MQ=255) aaCGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACgg > 1:42638/1‑140 (MQ=255) aaCGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACgg > 2:694347/1‑140 (MQ=255) cGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCt < 1:2386457/140‑1 (MQ=255) a‑CATCCGTGATGAAGTGGGGCACTGCGTG‑GGGTTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGt < 1:1536948/140‑1 (MQ=255) ccacccGTGATGAGGGGGGGCACTGCGTG‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGt < 2:943453/136‑1 (MQ=255) aTCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTAt < 1:1650866/140‑1 (MQ=255) tcggTGAGGAAGGGGGCCCCTGCGTG‑GGGGTTTACAATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 2:2176809/137‑1 (MQ=255) tCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 1:1794287/140‑1 (MQ=255) tCCGTGATGAAGGGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 1:1720908/140‑1 (MQ=255) cccGTGATGAGGGGGGGCACTGCGTG‑GGGTTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 2:2450568/139‑1 (MQ=255) cccGTGAGGAGGGGGGGCACTGCGTG‑GGGGTTTACAATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 2:1977138/139‑1 (MQ=255) ccGTGATGAGGGGGGGCACTGCGTG‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGc < 2:42638/140‑1 (MQ=255) cGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCa < 1:2184181/140‑1 (MQ=255) cGTGATGAAGGGGGGCCCTGCGTG‑GGGTTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCa < 2:70272/140‑1 (MQ=255) gTGATGAGGGGGGGCACGGCGTG‑GGGGTTTACAATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCAc < 2:1326391/140‑1 (MQ=38) gTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCAc > 1:417518/1‑140 (MQ=255) gTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCAc > 1:1280674/1‑140 (MQ=255) tgatgaAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACt > 2:1923378/1‑140 (MQ=255) gaAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGa > 2:1325395/1‑140 (MQ=255) ggggggCCCTGCGTC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGa < 1:2392201/138‑1 (MQ=255) gggCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCTAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATcc > 1:1692195/1‑140 (MQ=255) gggCACGGCGCG‑GGGGTTTACGAAACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATcc < 2:1586096/140‑1 (MQ=37) ggCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCTAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATccc < 2:1692195/140‑1 (MQ=255) ggCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATccc > 1:369255/1‑140 (MQ=255) cctggCGTG‑GGGGTTTCAGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCgg < 1:1176910/136‑1 (MQ=38) cACTGGGTG‑GGGGTTTACGATACCGCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCgg < 1:1806409/140‑1 (MQ=255) cACTGCGTC‑GGGTTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCgg < 1:418930/140‑1 (MQ=255) cACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATccctg > 2:367671/1‑138 (MQ=255) cACTGCGCC‑GGGGTTTACGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCgg < 1:694347/140‑1 (MQ=255) cTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCt > 1:1508080/1‑140 (MQ=255) tGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTg > 1:1586096/1‑140 (MQ=255) tGCGTC‑GGGGTTTACGATAACACCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTg > 1:1776621/1‑140 (MQ=255) cGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGcc > 1:1818068/1‑140 (MQ=255) gTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCt < 2:605559/140‑1 (MQ=255) tC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg > 1:2313743/1‑140 (MQ=255) gc‑GGGTTTTACAATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg < 1:1705987/139‑1 (MQ=255) c‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGa > 1:611971/1‑140 (MQ=255) gggTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAg < 2:611971/140‑1 (MQ=255) gggTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAg < 2:369255/140‑1 (MQ=255) tttACGATACCCCCGCCGATCTGAGCTCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCg < 2:1330093/140‑1 (MQ=255) gATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAAAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGccc < 1:1012268/140‑1 (MQ=255) aaCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGC‑‑TAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg > 2:463784/1‑124 (MQ=255) aaCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGC‑‑TAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg < 1:463784/124‑1 (MQ=255) | CAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGA‑CATCCGTGATGAAGTGGGGCACTGCGTC‑GGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGCCC > NC_000913/1550524‑1550798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |