| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 55,301 | C→A | T603T (ACG→ACT) | lptD ← | lipopolysaccharide assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 55,301 | 0 | C | A | 99.0% | 672.6 / ‑3.5 | 193 | T603T (ACG→ACT) | lptD | lipopolysaccharide assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base A (92/98); minor base G (1/1); total (94/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 196 total aligned reads displayed.
TCTTCATCCCGACGGTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCA > NC_000913/55164‑55437 | tCTTCATCCCGACGGTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGt > 1:272708/1‑140 (MQ=255) aTCCCGACGGTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTgt < 2:1881675/140‑1 (MQ=255) gACGGTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCa < 2:856548/140‑1 (MQ=255) gACGGTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCa < 2:1967735/140‑1 (MQ=255) gTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATtct < 2:1190990/140‑1 (MQ=255) tATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATtctc < 1:1740230/140‑1 (MQ=255) tATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATtctc < 1:1673739/140‑1 (MQ=255) tATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATtctc < 2:1181426/140‑1 (MQ=255) ttCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGTCGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTccc < 2:155851/140‑1 (MQ=255) ttCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGTAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTccc < 2:1650520/140‑1 (MQ=255) ttCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTccc > 1:1074953/1‑140 (MQ=255) ttCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTccc < 2:1533406/140‑1 (MQ=255) tGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATtct < 1:2399833/132‑1 (MQ=255) tGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCatgtt < 1:2360886/140‑1 (MQ=255) tGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCatgttatg > 1:133784/1‑140 (MQ=255) tGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCatg > 2:572274/1‑135 (MQ=255) tGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCatg < 1:572274/135‑1 (MQ=255) gAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCatgttatgtt > 2:205143/1‑140 (MQ=255) ttACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTc > 1:2010195/1‑140 (MQ=255) aCTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCAt > 1:2121277/1‑140 (MQ=255) cTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATc < 2:2010195/140‑1 (MQ=255) ggTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGc < 2:636727/140‑1 (MQ=255) ggTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGc < 2:1074953/140‑1 (MQ=255) tCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCa < 1:2282088/140‑1 (MQ=255) tCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCa > 1:180499/1‑140 (MQ=255) aCGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCg < 1:638271/140‑1 (MQ=255) cGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCga < 2:821522/140‑1 (MQ=255) ttATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCgaga < 2:1744928/140‑1 (MQ=255) tATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGAc > 1:2070419/1‑140 (MQ=255) tCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTc > 2:69568/1‑140 (MQ=255) aGACGTGTATCGTACTGAATCCCGCGACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTAGGTTGTCATCGCCAGTGCGAGACTCCGt > 1:2029538/1‑140 (MQ=255) aCGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCg > 1:1579565/1‑137 (MQ=255) aCGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGa > 2:1315/1‑140 (MQ=255) aCGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGa < 2:610432/140‑1 (MQ=255) tgtATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACt > 2:910170/1‑131 (MQ=255) tgtATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAt > 2:2275316/1‑140 (MQ=255) tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAtag > 1:1765482/1‑140 (MQ=255) tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAtag > 1:1534166/1‑140 (MQ=255) tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAtag > 1:953378/1‑140 (MQ=255) tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAtag > 1:1526748/1‑140 (MQ=255) tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAtag > 1:1492296/1‑140 (MQ=255) tACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCgaga < 1:1850643/122‑1 (MQ=255) tACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAAtag < 1:1871605/135‑1 (MQ=255) gAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGa < 2:1526748/140‑1 (MQ=255) aaTCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGAc > 2:411178/1‑140 (MQ=255) aaTCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGAc > 1:2202527/1‑140 (MQ=255) aaTCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGAc > 2:324605/1‑140 (MQ=255) tCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGAcc < 2:1611634/139‑1 (MQ=255) tCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGAcc > 1:1611634/1‑139 (MQ=255) tCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCa > 2:361798/1‑140 (MQ=255) ccGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGAcc > 1:85320/1‑137 (MQ=255) ccGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACAAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAAc < 1:1055901/140‑1 (MQ=255) cGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACg > 1:2011450/1‑140 (MQ=255) cGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACg > 2:58974/1‑140 (MQ=255) gCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACgg < 1:78172/140‑1 (MQ=255) gCCACGCAATCCCCAACGCTCGGAGATACGACAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACgg < 2:2212171/140‑1 (MQ=255) aCGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGaaa < 2:1195579/140‑1 (MQ=255) tCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTaa > 2:1441410/1‑140 (MQ=255) ccccAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGa > 2:1108261/1‑131 (MQ=255) cAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACg < 2:2438206/140‑1 (MQ=255) cGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTc > 2:2173727/1‑140 (MQ=255) cGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTc < 1:1315/140‑1 (MQ=255) tCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAAc > 1:998452/1‑140 (MQ=255) tCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAAc < 1:2259532/140‑1 (MQ=255) ggAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACgg > 1:1901538/1‑140 (MQ=255) gagaTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCGGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgc < 2:1821235/140‑1 (MQ=255) agaTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTGTGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgca < 1:1158333/140‑1 (MQ=255) gaTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcag < 2:962017/140‑1 (MQ=255) gaTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcag < 1:69568/140‑1 (MQ=255) gaTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcag < 1:361798/140‑1 (MQ=255) aTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcagc < 2:1391586/140‑1 (MQ=255) aTACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcagc < 1:53164/140‑1 (MQ=255) tACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcagca < 2:236499/140‑1 (MQ=255) aCGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGcat < 2:1902103/140‑1 (MQ=255) aCGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGcat < 1:119985/140‑1 (MQ=255) gCCAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGcatca < 2:484065/140‑1 (MQ=255) cAGTAAGTATCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGcatcatc > 2:1592778/1‑140 (MQ=255) gtaagtaTCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACgg < 2:1773085/128‑1 (MQ=255) gtaagtaTCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGcatcatcat < 1:411178/140‑1 (MQ=255) taagtaTCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcag < 2:785849/130‑1 (MQ=255) taagtaTCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCata < 1:601439/140‑1 (MQ=255) aTCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGgcag < 2:1859863/125‑1 (MQ=255) tCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCg < 2:290947/140‑1 (MQ=255) tCGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCAAGTGCGAGACTCCGTGAAATAGTAAATTTGCCCAACGGAAATATTACAACGTTCACCGGCAGCATCATCATATATGCg < 2:2029538/140‑1 (MQ=255) cGCCTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGcatcat < 2:303162/129‑1 (MQ=255) ccTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCgaga > 1:1266122/1‑140 (MQ=255) cTGCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGAt > 2:1263400/1‑140 (MQ=255) gCCCACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGAtgt > 2:1494825/1‑140 (MQ=255) cccACACCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGAtgtg > 2:2195769/1‑140 (MQ=255) cacCAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGacac > 1:192397/1‑140 (MQ=255) cAGTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCgg < 1:2173727/140‑1 (MQ=255) gTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtc < 1:1182971/140‑1 (MQ=255) gTGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtc > 1:1920727/1‑140 (MQ=255) gTGAACCAGTTTTGTCGTCATACTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtc < 1:1441410/140‑1 (MQ=255) tGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCg < 2:1285534/123‑1 (MQ=255) tGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCg > 1:1285534/1‑123 (MQ=255) tGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtcg > 1:803017/1‑140 (MQ=255) tGAACCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtcg > 2:424229/1‑140 (MQ=255) aaCCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtcgtc > 1:869262/1‑140 (MQ=255) aaCCAGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGgtcgtc < 1:1746983/140‑1 (MQ=255) | TCTTCATCCCGACGGTATTCAATGCTGGAGTTACTGGTCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAACCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCA > NC_000913/55164‑55437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |