BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,373,820	C→A	A224S (GCG→TCG)	nanR ←	DNA‑binding transcriptional dual regulator NanR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,373,820	0	C	A	100.0%	674.5 / NA	186	A224S (GCG→TCG)	nanR	DNA‑binding transcriptional dual regulator NanR
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (72/114); total (72/114)

Only 100 of 188 total aligned reads displayed.

TTCACTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGCAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCGGGGATCTCCGCCAG  >  NC_000913/3373683‑3373955

ttCACTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTAAGGATCATGACGGCGGATCGCATCAACGATCGaaa                                                                                                                                       >  1:123524/1‑140 (MQ=255)

  cACTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAata                                                                                                                                     >  1:2011429/1‑140 (MQ=255)

  cACTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAata                                                                                                                                     <  2:1731256/140‑1 (MQ=255)

    cTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATg                                                                                                                                   >  1:1294517/1‑140 (MQ=255)

    cTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATg                                                                                                                                   <  2:791220/140‑1 (MQ=255)

    cTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATg                                                                                                                                   <  1:373912/140‑1 (MQ=255)

      aaaGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCt                                                                                                                                 <  1:1102401/140‑1 (MQ=255)

       aaGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTg                                                                                                                                >  2:214996/1‑140 (MQ=255)

       aaGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTg                                                                                                                                <  1:2147136/140‑1 (MQ=255)

       aaGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTg                                                                                                                                >  1:1424081/1‑140 (MQ=255)

         gTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGtt                                                                                                                              <  2:1037001/140‑1 (MQ=255)

         gTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGtt                                                                                                                              <  1:1932548/140‑1 (MQ=255)

          tGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTg                                                                                                                             <  1:625788/140‑1 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTg                                                                                                                             >  2:2326062/1‑138 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTg                                                                                                                             <  1:2326062/138‑1 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTg                                                                                                                             <  1:1030247/138‑1 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAt                                                                                                                           <  2:2349600/140‑1 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAt                                                                                                                           >  1:51957/1‑140 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAt                                                                                                                           >  1:1198964/1‑140 (MQ=255)

            gCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAt                                                                                                                           <  1:2076970/140‑1 (MQ=255)

             cATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAta                                                                                                                          <  1:434783/140‑1 (MQ=255)

               ttattTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaac                                                                                                                        >  2:1991668/1‑140 (MQ=255)

               ttattTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaac                                                                                                                        <  2:1166150/140‑1 (MQ=255)

               ttattTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaac                                                                                                                        >  1:1799455/1‑140 (MQ=255)

               ttattTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTAAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaac                                                                                                                        <  1:2263883/140‑1 (MQ=255)

                 attTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaacta                                                                                                                      <  2:531515/140‑1 (MQ=255)

                 attTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaacta                                                                                                                      >  2:2459371/1‑140 (MQ=255)

                 attTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaacta                                                                                                                      <  2:1553893/140‑1 (MQ=255)

                   ttCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaactaac                                                                                                                    <  1:43646/140‑1 (MQ=255)

                   ttCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGAtaactaac                                                                                                                    <  1:1173552/140‑1 (MQ=255)

                    tCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACg                                                                                                                   <  2:1827012/140‑1 (MQ=255)

                     cTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACgt                                                                                                                  <  1:304670/140‑1 (MQ=255)

                      tttttGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACgtt                                                                                                                 >  1:1715611/1‑140 (MQ=255)

                       ttttGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACgttg                                                                                                                >  2:1831970/1‑140 (MQ=255)

                        tttGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACgttgt                                                                                                               <  1:1452533/140‑1 (MQ=255)

                         ttgttgGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACgttgtt                                                                                                              >  2:507028/1‑140 (MQ=255)

                          tgttgGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTa                                                                                                             <  1:1808260/140‑1 (MQ=255)

                          tgttgGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTa                                                                                                             <  2:1360215/140‑1 (MQ=255)

                          tgttgGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTa                                                                                                             <  1:1831970/140‑1 (MQ=255)

                             tggtggTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTAAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGt                                                                                                          <  2:123524/140‑1 (MQ=255)

                              ggtggtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGtt                                                                                                         <  1:2155141/140‑1 (MQ=255)

                               gtggtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTc                                                                                                        >  2:1664467/1‑140 (MQ=255)

                                  gtCTGGCCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:567623/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACgttgt                                                                                                               <  1:2365655/130‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:1294517/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:1421652/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:1951216/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:2418208/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  1:1961817/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:475932/140‑1 (MQ=255)

                                  gtCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     <  2:424788/140‑1 (MQ=255)

                                      gACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGt                                                                                                 >  1:483179/1‑140 (MQ=255)

                                         cGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGtt                                                                                                         >  2:208526/1‑129 (MQ=255)

                                          gAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCt                                                                                             <  1:781445/140‑1 (MQ=255)

                                                 tGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTg                                                                                                     >  2:36878/1‑125 (MQ=255)

                                                        tAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGtt                                                                               >  2:620731/1‑140 (MQ=255)

                                                        tAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGtt                                                                               <  2:1198964/140‑1 (MQ=255)

                                                          gCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTgg                                                                             <  1:1204269/140‑1 (MQ=255)

                                                           cAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTggg                                                                            >  1:694966/1‑140 (MQ=255)

                                                               gaCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTg                                                                        <  1:977924/140‑1 (MQ=255)

                                                                aCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTa                                                                                     <  2:390527/126‑1 (MQ=255)

                                                                aCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGc                                                                       <  1:1767773/140‑1 (MQ=255)

                                                                aCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGc                                                                       <  2:2263656/140‑1 (MQ=255)

                                                                aCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGc                                                                       <  1:1532422/140‑1 (MQ=255)

                                                                aCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGc                                                                       >  1:1589377/1‑140 (MQ=255)

                                                                aCGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTAAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGc                                                                       >  2:430885/1‑140 (MQ=255)

                                                                  gCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCgg                                                                     >  1:468040/1‑140 (MQ=255)

                                                                  gCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCgg                                                                     >  2:2126495/1‑140 (MQ=255)

                                                                   cTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGc                                                                    <  1:2203442/140‑1 (MQ=255)

                                                                     gTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCaa                                                                  >  1:402401/1‑140 (MQ=255)

                                                                        gagaTGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATaa                                                               <  1:2226445/140‑1 (MQ=255)

                                                                        gagaTGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATaa                                                               <  1:584999/140‑1 (MQ=255)

                                                                              cGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGt                                                         >  2:983351/1‑140 (MQ=255)

                                                                              cGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGt                                                         >  1:654328/1‑140 (MQ=255)

                                                                                 ttGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGa                                                      <  2:1717705/140‑1 (MQ=255)

                                                                                  tGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAg                                                     <  1:327619/140‑1 (MQ=255)

                                                                                  tGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAg                                                     <  1:752650/140‑1 (MQ=255)

                                                                                      aCGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAgg                                                 <  2:2027788/140‑1 (MQ=255)

                                                                                      aCGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAgg                                                 <  1:1664467/140‑1 (MQ=255)

                                                                                         cACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAggg                                                <  2:2050304/138‑1 (MQ=255)

                                                                                         cACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAggg                                                >  1:2050304/1‑138 (MQ=255)

                                                                                         cACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAggg                                                <  2:180571/138‑1 (MQ=255)

                                                                                         cACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCa                                              >  1:2423586/1‑140 (MQ=255)

                                                                                              tCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTg                                         >  1:213579/1‑140 (MQ=255)

                                                                                                      gTCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCa                                 >  1:596036/1‑140 (MQ=255)

                                                                                                       tCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCAt                                <  2:498104/140‑1 (MQ=255)

                                                                                                       tCAGGATCATGACGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCAt                                <  2:1443348/140‑1 (MQ=255)

                                                                                                                  aCGGCGGATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGt                     <  2:654328/140‑1 (MQ=255)

                                                                                                                     gcggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGt                     >  2:2168031/1‑137 (MQ=255)

                                                                                                                     gcggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGt                     <  1:2168031/137‑1 (MQ=255)

                                                                                                                     gcggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTAc                  >  2:2460098/1‑140 (MQ=255)

                                                                                                                      cggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCa                                 <  1:830259/124‑1 (MQ=255)

                                                                                                                      cggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCa                                 >  2:830259/1‑124 (MQ=255)

                                                                                                                      cggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGt                     <  1:1061886/136‑1 (MQ=255)

                                                                                                                       ggATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCTGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCg                >  1:293236/1‑140 (MQ=255)

                                                                                                                        gATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGGCATGAAGATTGGGTTACCgg               <  2:1189353/140‑1 (MQ=255)

                                                                                                                        gATCGCATCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCgg               <  1:427953/140‑1 (MQ=255)

                                                                                                                               tCAACGATCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCGGGGAtctc        <  2:468040/140‑1 (MQ=255)

                                                                                                                                     aTCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCGGGGATCTCCGCCAg  >  1:130718/1‑140 (MQ=255)

                                                                                                                                     aTCGAAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCGGGGATCTCCGCCAg  <  1:13019/140‑1 (MQ=255)

TTCACTAAAGTGGCATTATTTCTTTTTGTTGGTGGTCTGACCGAAAGCGTGCCAGGTAGCAGAGACGCTGTTGAGATGCGATTGCAACGCACGATCGGCTTCGTCAGGATCATGACGGCGGATCGCATCAACGATCGCAATATGCTGTTGATAACTAACGTTGTTATGTTCGTGCAGTGCCTGATCGGTAACCGTTGGGCGTGCGGCAATAAGCCAGTCGAGCAGGGCAACGTGGATCGCCATGAAGATTGGGTTACCGGGGATCTCCGCCAG  >  NC_000913/3373683‑3373955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`