| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,577,789 | G→T | S313Y (TCT→TAT) | gntR ← | DNA‑binding transcriptional repressor GntR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,577,789 | 0 | G | T | 98.5% | 447.0 / ‑2.5 | 131 | S313Y (TCT→TAT) | gntR | DNA‑binding transcriptional repressor GntR |
| Reads supporting (aligned to +/- strand): ref base G (1/1); major base T (68/59); minor base C (1/1); total (70/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.48e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GTCCAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAATCGCCATA > NC_000913/3577653‑3577923 | gTCCAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATAtt < 2:1345644/140‑1 (MQ=255)gTCCAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATAtt < 1:457792/140‑1 (MQ=255)gTCCAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATAtt < 1:50209/140‑1 (MQ=255) tCCAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTc > 2:529278/1‑140 (MQ=255) cAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGc > 2:1008984/1‑140 (MQ=255) gACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGaa > 1:1697427/1‑140 (MQ=255) cAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATa < 1:862399/140‑1 (MQ=255) atCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATAcgcg < 1:797385/140‑1 (MQ=255) atCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATAcgcg > 2:1613549/1‑140 (MQ=255) aaTATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGc > 1:99308/1‑140 (MQ=255) aaTATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTCACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGc > 2:634839/1‑140 (MQ=255) atatCCTCCCAT‑CCCTAAATGTATTAAGTGGGACTTACTCAAAATTTTGGGGTTTAAAAAGACCCG‑CCGGTGGACAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGt < 2:120579/140‑1 (MQ=255) atatCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCg > 2:887266/1‑140 (MQ=255) tatCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGt > 1:1611164/1‑140 (MQ=255) tccatccaTGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTc < 1:293541/140‑1 (MQ=255) tccatccaTGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTc < 1:1613549/140‑1 (MQ=255) tccatccaTGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTc < 2:1697427/140‑1 (MQ=255) ccatGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcgc < 1:55113/140‑1 (MQ=255) ccatGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcgc > 2:976768/1‑140 (MQ=255) ccatGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcgc > 2:522657/1‑140 (MQ=255) tGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTc > 1:682363/1‑132 (MQ=255) tGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTc < 2:682363/132‑1 (MQ=255) tGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCaa > 1:627474/1‑140 (MQ=255) tGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCaa > 1:433951/1‑140 (MQ=255) tGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCaa > 2:761041/1‑140 (MQ=255) tGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCaa < 1:1445431/140‑1 (MQ=255) tAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTg > 1:908440/1‑140 (MQ=255) aaGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATa > 1:583288/1‑136 (MQ=255) aaGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATa < 2:583288/136‑1 (MQ=255) aGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcg > 2:455941/1‑129 (MQ=255) aGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAgcg < 1:455941/129‑1 (MQ=255) gtA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCAt > 1:838547/1‑140 (MQ=255) ta‑taAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATc > 2:685966/1‑140 (MQ=255) a‑taAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATcc > 2:1598098/1‑140 (MQ=255) a‑taAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATcc > 1:899311/1‑140 (MQ=255) taAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCg < 1:685966/140‑1 (MQ=255) tgAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATc > 2:1882296/1‑132 (MQ=255) tgAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcg > 2:1325707/1‑140 (MQ=255) tgAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcg > 1:1447361/1‑140 (MQ=255) tgAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcg < 2:76788/140‑1 (MQ=255) tgAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcg > 1:166369/1‑140 (MQ=255) gAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcgc < 2:166369/140‑1 (MQ=255) aGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcgcg > 1:576865/1‑140 (MQ=255) aGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAcgcg > 1:1624850/1‑140 (MQ=255) aGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAc < 2:907223/137‑1 (MQ=255) aGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCAc > 1:907223/1‑137 (MQ=255) gCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACgcgg < 1:887266/140‑1 (MQ=255) cTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACACATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACgcggc > 1:1292857/1‑140 (MQ=255) cTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTc > 2:1798277/1‑140 (MQ=255) ttCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCa > 2:1180194/1‑140 (MQ=255) cAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGc < 1:1830876/140‑1 (MQ=255) aaTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCa > 1:1179566/1‑139 (MQ=255) aaTTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCa < 2:1179566/139‑1 (MQ=255) tttGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGc > 1:1365647/1‑140 (MQ=255) gtgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCg > 1:332423/1‑140 (MQ=255) tgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGc < 2:1087196/140‑1 (MQ=255) tgGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGc < 2:459507/140‑1 (MQ=255) aaaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCg < 1:1268670/132‑1 (MQ=255) aaaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCg > 2:1268670/1‑132 (MQ=255) aaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTg > 2:2677/1‑140 (MQ=255) aaTAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTg < 1:2677/140‑1 (MQ=255) aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTcc > 1:830076/1‑140 (MQ=255) aTCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTcc > 2:1171255/1‑140 (MQ=255) tCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCa < 2:433951/140‑1 (MQ=255) ccGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCAt > 2:1343159/1‑140 (MQ=255) gCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCa > 1:1366985/1‑140 (MQ=255) cccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc < 1:1598098/140‑1 (MQ=255) cccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc > 1:1232586/1‑140 (MQ=255) cccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc < 2:838547/140‑1 (MQ=255) cccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc > 1:594678/1‑140 (MQ=255) cccGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc < 2:150228/140‑1 (MQ=255) cGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAcat < 2:1647655/140‑3 (MQ=255) cGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCt < 1:574150/140‑1 (MQ=255) cGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCt < 1:529278/140‑1 (MQ=255) gTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGa > 1:819276/1‑140 (MQ=255) gTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGa > 1:593586/1‑140 (MQ=255) gTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACACATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGa < 2:1292857/140‑1 (MQ=255) tGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAc < 1:438661/140‑1 (MQ=255) tGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAc > 1:1676022/1‑140 (MQ=255) gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAcc < 2:593586/140‑1 (MQ=255) gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAcc < 2:1624850/140‑1 (MQ=255) gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAcc < 1:1299982/140‑1 (MQ=255) gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAcc < 1:1325707/140‑1 (MQ=255) gACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGAcc < 2:1232586/140‑1 (MQ=255) tGAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCa < 1:1171255/140‑1 (MQ=255) gAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCAt > 2:1557909/1‑140 (MQ=255) gAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCAt < 1:1180194/140‑1 (MQ=255) gAAACCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCAt < 2:819276/140‑1 (MQ=255) aaaCCTAAATCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCAc < 1:460554/125‑1 (MQ=255) aTCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGa > 2:546370/1‑140 (MQ=255) aTCTAACATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGa > 1:1882133/1‑140 (MQ=255) cATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCGCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCgg > 2:1461439/1‑140 (MQ=255) cATTTTCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCga > 2:1707288/1‑139 (MQ=255) tttCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCaa < 1:1461439/140‑1 (MQ=255) tttCGGTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCaa < 2:899311/140‑1 (MQ=255) ggTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAAt > 1:768327/1‑137 (MQ=255) ggTGTCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAAt < 2:768327/137‑1 (MQ=255) tCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAATCGCCata > 1:1809/1‑140 (MQ=255) tCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAATCGCCata > 2:592969/1‑140 (MQ=255) tCACATATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAATCGCCata < 2:578335/140‑1 (MQ=255) | GTCCAGCCGGACAATATCAGAAGCAATATCCATCCATGCCTTAAGTGTA‑TAAGTGTGAGCTACTTCAAATTTGTGGGCTTAAATAGATCCGCCCGGTGACAAGGTGAAACCTAAATCTAACATTTTCGGTGTCACAGATTCGCCACGAATACGCGCCAGCAGGCGTTCAGCGCCAATACTGCCCATCCGCTCACGCGGCGTCAGCACGCTCGCAAGTCGTGGCTCCATCACCTGACCAATGTCATGACCGTGGAAACCGGCAATCGCCATA > NC_000913/3577653‑3577923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |