Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,229,556	A→G	I196T (ATC→ACC)	pepE ←	peptidase E

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,229,556	0	A	G	100.0%	343.3 / NA	93	I196T (ATC→ACC)	pepE	peptidase E
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (52/41);  total (52/41)

AGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGATCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCG  >  NC_000913/4229423‑4229691                                                                                                                                      |                                                                                                                                        aGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGt                                                                                                                                   <  1:1695649/140‑1 (MQ=255) aGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGt                                                                                                                                   <  2:324988/140‑1 (MQ=255)  gATGCCGTATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGtt                                                                                                                                  >  2:875193/1‑140 (MQ=255)   aTGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTa                                                                                                                                 >  2:1133173/1‑140 (MQ=255)   aTGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTa                                                                                                                                 >  1:1464955/1‑140 (MQ=255)   aTGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTa                                                                                                                                 >  2:181626/1‑140 (MQ=255)   aTGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTa                                                                                                                                 >  1:1163296/1‑140 (MQ=255)     gCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGt                                                                                                                                   <  2:522593/136‑1 (MQ=255)     gCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGt                                                                                                                                   >  1:522593/1‑136 (MQ=255)     gCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTAcc                                                                                                                               >  1:170257/1‑140 (MQ=255)     gCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTAcc                                                                                                                               <  1:876675/140‑1 (MQ=255)      ccGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCt                                                                                                                              <  1:1835536/140‑1 (MQ=255)         gATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTcc                                                                                                                           >  2:546477/1‑140 (MQ=255)           tCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCgg                                                                                                                         <  2:169600/140‑1 (MQ=255)            cATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGt                                                                                                                        <  2:1222472/140‑1 (MQ=255)             aTGCATACGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTa                                                                                                                       >  2:394274/1‑140 (MQ=255)                cATCCGGCAATTCACCTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGAc                                                                                                                    <  1:181626/140‑1 (MQ=255)                   ccGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCgg                                                                                                                         <  1:821320/132‑1 (MQ=255)                   ccGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCgg                                                                                                                         >  2:821320/1‑132 (MQ=255)                   ccGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCat                                                                                                                 <  1:1164704/140‑2 (MQ=255)                    cGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaat                                                                                                                >  1:1607825/1‑140 (MQ=255)                     ggCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaata                                                                                                               <  1:1332373/140‑1 (MQ=255)                     ggCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaata                                                                                                               <  2:1793721/140‑1 (MQ=255)                     ggCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaata                                                                                                               >  1:1734954/1‑140 (MQ=255)                     ggCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaata                                                                                                               <  1:546477/140‑1 (MQ=255)                     ggCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaata                                                                                                               >  1:1793721/1‑140 (MQ=255)                      gCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCaataa                                                                                                              >  1:1664626/1‑140 (MQ=255)                          ttCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGt                                                                                                          <  1:152545/140‑1 (MQ=255)                            cACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCa                                                                                                        >  1:470859/1‑140 (MQ=255)                               ttAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGtt                                                                                                     >  2:1050864/1‑140 (MQ=255)                                       ggTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGcgcg                                                                                             <  1:1050864/140‑1 (MQ=255)                                       ggTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGcgcg                                                                                             >  2:348696/1‑140 (MQ=255)                                       ggTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGcgcg                                                                                             <  1:1133173/140‑1 (MQ=255)                                         tGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGcgac                                                                                           >  2:1196570/1‑140 (MQ=255)                                            ccAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCgacgac                                                                                        <  2:1607825/140‑1 (MQ=255)                                                cTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACcag                                                                                     <  1:1883769/139‑1 (MQ=255)                                                cTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACcag                                                                                     >  2:1883769/1‑139 (MQ=255)                                                   ccAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGt                                                                                 <  2:1664626/140‑1 (MQ=255)                                                    cAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGtt                                                                                <  1:1196570/140‑1 (MQ=255)                                                    cAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGtt                                                                                <  1:394274/140‑1 (MQ=255)                                                       cGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTcgc                                                                             >  1:1516376/1‑140 (MQ=255)                                                           aCCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAAt                                                                         >  2:1479191/1‑140 (MQ=255)                                                                     cACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCa                                                               <  1:875193/140‑1 (MQ=255)                                                                         aGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACg                                                                      >  2:1866462/1‑129 (MQ=255)                                                                         aGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACg                                                                      <  1:1866462/129‑1 (MQ=255)                                                                            cTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGttt                                                        <  2:23711/140‑1 (MQ=255)                                                                            cTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGttt                                                        <  1:1479191/140‑1 (MQ=255)                                                                            cTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGttt                                                        <  1:1316046/140‑1 (MQ=255)                                                                            cTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGttt                                                        <  1:1755100/140‑1 (MQ=255)                                                                             ttAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTc                                                       <  1:1574367/140‑1 (MQ=255)                                                                              taatcccaTAAGTGGTGTGCGGGCCACCCAGCGTAGCGTGACCTTTGATCACTGTGGTCCAGTTACCTTCCGGTAGTCCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGGTCGCGAATACGCTGCTCACGGGTTTCa                                                      <  2:1047240/134‑1 (MQ=255)                                                                              tAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCa                                                      >  1:1261880/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  1:1374254/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  1:1353469/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               <  2:1199556/140‑1 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  2:897671/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  2:897899/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  2:1046659/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  1:261773/1‑140 (MQ=255)                                                                                     aTAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  1:498383/1‑140 (MQ=255)                                                                                      tAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATg                                              >  2:1022320/1‑140 (MQ=255)                                                                                          tggtgTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCt                                          >  2:1304112/1‑140 (MQ=255)                                                                                            gtgtTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTc                                        >  2:1117597/1‑140 (MQ=255)                                                                                             tgtTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTc                                                       >  1:358021/1‑124 (MQ=255)                                                                                             tgtTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTc                                                       <  2:358021/124‑1 (MQ=255)                                                                                             tgtTCGGGCCACCCAGCGTAGCGTGACATTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTcc                                       >  2:845282/1‑140 (MQ=255)                                                                                               ttCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               <  1:1230628/130‑1 (MQ=255)                                                                                               ttCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTAt                                               >  2:1230628/1‑130 (MQ=255)                                                                                               ttCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCgg                                     >  1:293988/1‑140 (MQ=255)                                                                                               ttCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCgg                                     >  1:1165392/1‑140 (MQ=255)                                                                                               ttCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCgg                                     >  1:417413/1‑140 (MQ=255)                                                                                                 cGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCa                                   <  2:417413/140‑1 (MQ=255)                                                                                                    gCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAgcg                                >  1:1845757/1‑140 (MQ=255)                                                                                                    gCCACCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAgcg                                <  2:1261880/140‑1 (MQ=255)                                                                                                       aCCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGt                             >  2:1876998/1‑140 (MQ=255)                                                                                                       aCCCAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGt                             <  2:1516376/140‑1 (MQ=255)                                                                                                         ccAGCGTAGCGTGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTg                           >  1:548282/1‑140 (MQ=255)                                                                                                              gtagcgtGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGcgcg                              >  1:492060/1‑132 (MQ=255)                                                                                                              gtagcgtGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGcgcg                              <  2:492060/132‑1 (MQ=255)                                                                                                                agcgtGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGt                    >  1:104390/1‑140 (MQ=255)                                                                                                                agcgtGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGt                    >  2:1535837/1‑140 (MQ=255)                                                                                                                 gcgtGACCTTTCCTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAAGCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTg                   <  2:469957/140‑1 (MQ=255)                                                                                                                 gcgtGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTg                   <  2:1374254/140‑1 (MQ=255)                                                                                                                  cgtGACCTTTACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCTCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGc                  >  2:396020/1‑140 (MQ=255)                                                                                                                           tACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGAtt         >  1:1310846/1‑140 (MQ=255)                                                                                                                           tACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGAtt         >  1:367647/1‑140 (MQ=255)                                                                                                                           tACTCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGAtt         >  1:293422/1‑140 (MQ=255)                                                                                                                              tCACTGTGGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGc      <  2:1845757/140‑1 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGAttt        >  1:1258097/1‑134 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGAttt        <  2:1258097/134‑1 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCg  >  1:1614915/1‑140 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCg  <  2:1614915/140‑1 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCg  <  2:1568274/140‑1 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCg  <  2:293988/140‑1 (MQ=255)                                                                                                                                  tgtgGTCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCg  >  1:179636/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                        AGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAGCGTGACCTTTACTCACTGTGATCCAGTTACCTTCCGGTAGACCAATAATCGTCAGTTCTGGCGCGACGACCAGCAGTTCGCGAATACGCTGCTCACGGGTTTCACCTTTATGGCCTTCCGGCAGCGCGTTGGTGAAGTGCGGGTTGATTTGCAGCG  >  NC_000913/4229423‑4229691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑