Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913445,5580AC27.8% 136.9 / 36.4 72V370G (GTA→GGA) yajRputative major facilitator superfamily transport protein YajR
Reads supporting (aligned to +/- strand):  ref base A (37/15);  new base C (0/20);  total (37/35)
Fisher's exact test for biased strand distribution p-value = 1.04e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

AGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTG  >  NC_000913/445420‑445693
                                                                                                                                          |                                                                                                                                        
aGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGTACTGGCGACTGTCAGCCCCACCGCGGCCCGCATTGCGCCAGCGAGAAAAAc                                                                                                                                         >  2:2325183/1‑140 (MQ=255)
aGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATAc                                                                                                                                         >  2:246192/1‑140 (MQ=255)
   aaaCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCACAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATAcccc                                                                                                                                      <  1:2581052/140‑1 (MQ=255)
    aaCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACAAACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATAccccc                                                                                                                                     <  1:25945/140‑1 (MQ=255)
     aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTGCGCCCGCGAGAAAAAcccccc                                                                                                                                    >  2:2565487/1‑139 (MQ=255)
     aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  1:916308/140‑1 (MQ=255)
     aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  1:1311929/140‑1 (MQ=255)
     aCGCACTTTTAACGCCTCGCTTGCGGCAATGGTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt                                                                                                                                    <  1:1384171/140‑1 (MQ=255)
       gCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGa                                                                                                                                  <  1:1269605/140‑1 (MQ=255)
           ttttAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGTCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGt                                                                                                                              <  2:1210658/140‑1 (MQ=255)
                 cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACa                                                                                                                       <  1:999467/140‑1 (MQ=255)
                 cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACa                                                                                                                       <  1:2325183/140‑1 (MQ=255)
                  gCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACAt                                                                                                                      <  1:2213824/140‑1 (MQ=255)
                     tCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATTGTACTGGCGACTGTCAGCCACACTGCGGCCAGCCATGCGCCAGCGAGAAAAAACCCCCGACCGC‑CCAACATGcc                                                                                                                   >  1:1653557/1‑140 (MQ=255)
                       gTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGt                                                                                                                 <  2:11512/140‑1 (MQ=255)
                       gTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGGACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGCGAGAAAAAACCCCCGACCGT‑CAAACATGCCGt                                                                                                                 >  2:787937/1‑140 (MQ=255)
                          tGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGTACTGGCGACCGTCAGCCACACTGCGGCCAGCATTGCGCCCGCGAGAAAAACCCCCCGACCGT‑CAAACAAGCCGTTaa                                                                                                              >  2:2417667/1‑140 (MQ=255)
                               cAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAg                                                                                                         <  1:913945/140‑1 (MQ=255)
                                 aTGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAgcc                                                                                                       <  1:2391977/140‑1 (MQ=255)
                                         cGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCcgcg                                                                                               >  1:1501783/1‑140 (MQ=255)
                                         cGGAATTTCAAGCGGCAAACTGCTGACATCCGGCGTTTCTTTCATGGTCCTGGCGACTGTCACCCACCCGGCGGCAAGCATTGCGCCAGCGAAAAATCCCCCTTGCCCGT‑AAAACATGCCGTTAATCCAGCCGCCCAGCg                                                                                               <  2:1653557/140‑1 (MQ=255)
                                            gATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAAc                                                                                            <  1:246192/140‑1 (MQ=255)
                                                        aaaaCTGCGGACATACGGCGGTTCTTTCATGTTCTTGGCGCCTGTAACCCCCCCGGCGGCCAGCCTTGCCCCAGCGAGAAACCCCCCCTGCCCGA‑AAAAAATGCCGTTAACCCAGCCCCCCAGCGAACCGCCAATcgcca                                                                                <  2:429861/139‑1 (MQ=255)
                                                               ctgACATACGGCGGTTCTTTCATGGTCCGGGCGACTGTCAGCCACCCGGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAg                                                                         <  2:2224779/140‑1 (MQ=255)
                                                               ctgACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTTCGCCAGCGAGAAAAACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCCGCGAACCCCCCAacgccacgcccaa                                                                         >  2:906941/1‑137 (MQ=255)
                                                                  aCATACGGCGGTTCTTTCATGGTACCGGCGACTGTCAGCCACACCGCGGCCAGCCTTGCCCCCACGAGAAATACCCCCCTACCCT‑CAAACAAGCCGTTAATCCAGCCGCCCAGCCAACCGCCAAACGCCCCCCCAAGaaa                                                                      >  2:1595211/1‑140 (MQ=255)
                                                                    atccggcggTTCTTTCATGGTACTGGCGCCTGCCACCCACACTGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCGGCCCGT‑AAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAAct                                                                    <  2:1559284/137‑1 (MQ=255)
                                                                       cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTGCGCCAGCGAGAAAAACCCCCCGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCCGCGAACCCCCAATCGCCCCGCCAAGAAAatggc                                                                 >  2:881391/1‑140 (MQ=255)
                                                                       cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGCGAGAAATACCCCCTGACCGT‑CAAACATACCGTTAATCCAGCCGCCCCGCGAACCGCCCATCGCCCCGCCAAAAAAatggc                                                                 >  2:869419/1‑140 (MQ=255)
                                                                       cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc                                                                 <  1:1071325/140‑1 (MQ=255)
                                                                       cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc                                                                 >  1:1559284/1‑140 (MQ=255)
                                                                       cggcggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCCGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc                                                                 >  1:2140860/1‑140 (MQ=255)
                                                                         gcggTTCTTTTATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAAACGCCAATCGCCACGCCCAGAAAacggctg                                                               >  2:1587700/1‑140 (MQ=255)
                                                                         agacagcTTTCATGGTCCTGGCGACTGTCACCCACACTGCGGCCAGCTTTGCCCCAGCGAAAAATCCCCCCTGACCGT‑AAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggctg                                                               <  2:332624/134‑1 (MQ=255)
                                                                            gTTCTTTTATGGGACTGGCGACTGTCAGCCACACCGCGGCCAGCATTGCGCCAGCGAGGAATACCCCCCGACCGT‑CCAACATGCCGTTAATCCCGCCCCCCAGCGAACCGCCAATCACCACCCCAAGAAAATGGCtggtg                                                            >  2:2735523/1‑140 (MQ=255)
                                                                            gTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGTGAACCGCCAATCGCCACGCCAAGAAACTGGCtggtg                                                            <  1:1503735/140‑1 (MQ=255)
                                                                             ttCTTTCATGTTACTGGCGACTGTCAGCCACCCGGCGGCAAGCATTGCGCCAGGGAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCtggtgg                                                           <  2:1326280/140‑1 (MQ=255)
                                                                              tCTTTTATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCCGCGAGAAAAAACCCCCGACCCT‑CCAACATGCCGTTAATCCAACCGCCCAGTGAACCGCCAAACGCCCCGCCAAGAAAATGGCtgggggg                                                          >  2:1503735/1‑139 (MQ=255)
                                                                              tCTTTTATGGTACTGGCGACTGTCAGCCACACCGCGGCCCGCATTTCGCCCGCGAGAAAAACCCCCCGACCGT‑CAAAAATGCCGTTAATCCAACCGCCCCGCGAACCCCCCAACGCCACCCCCAGAAAATGGCtgggggg                                                          >  2:632193/1‑139 (MQ=255)
                                                                                   cATGGTACGGGCGCCTGCCAGCCACACGGCGCCCAGCATTGCGCCAGCAAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTaaa                                                     <  1:1595211/140‑1 (MQ=255)
                                                                                      ggTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAacac                                                  >  1:2287892/1‑140 (MQ=255)
                                                                                       gTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAcc                                                 >  2:2375458/1‑140 (MQ=255)
                                                                                       gTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAcc                                                 >  2:1720163/1‑140 (MQ=255)
                                                                                       gTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAcc                                                 >  2:1630010/1‑140 (MQ=255)
                                                                                       gTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAcc                                                 >  2:1480870/1‑140 (MQ=255)
                                                                                        tACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc                                                <  1:2417667/140‑1 (MQ=255)
                                                                                         aCTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCa                                               >  1:2580412/1‑140 (MQ=255)
                                                                                          cgggCGCCTGTCAGCCACCCTGCGGCCAGCATTGCCCCAGCGAGAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt                                              <  2:512701/138‑1 (MQ=255)
                                                                                          cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAacctgtct                                              >  1:332624/1‑134 (MQ=255)
                                                                                          cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt                                              >  1:1956052/1‑140 (MQ=255)
                                                                                           tGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCATGCCAAGAAACTGGCCGGTGGAGTAAACACCCATc                                             >  1:464949/1‑140 (MQ=255)
                                                                                           tGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATc                                             >  1:1340333/1‑140 (MQ=255)
                                                                                           tGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATc                                             >  2:553039/1‑140 (MQ=255)
                                                                                            ggCGCCTGTCACCCACACTGCGGCCAGCATGGCGCCAGCGAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCg                                            <  2:728235/140‑1 (MQ=255)
                                                                                             gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc                                           >  1:2320399/1‑140 (MQ=255)
                                                                                             gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGGAAACACCCATCGc                                           >  1:675833/1‑140 (MQ=255)
                                                                                                 cTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       <  1:1090037/140‑1 (MQ=255)
                                                                                                 cTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       <  1:787937/140‑1 (MQ=255)
                                                                                                 cTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       <  1:1480870/140‑1 (MQ=255)
                                                                                                  tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:1087426/1‑140 (MQ=255)
                                                                                                  tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:971361/1‑140 (MQ=255)
                                                                                                  tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:646753/1‑140 (MQ=255)
                                                                                                  tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:1997565/1‑140 (MQ=255)
                                                                                                  tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc                                      >  1:506348/1‑140 (MQ=255)
                                                                                                       gCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTg                                 >  1:1787099/1‑140 (MQ=255)
                                                                                                           cacTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAAc                             >  2:2173213/1‑140 (MQ=255)
                                                                                                            acTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAAcc                            >  2:1142027/1‑140 (MQ=255)
                                                                                                              tGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       <  1:1758586/127‑1 (MQ=255)
                                                                                                              tGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa                                       >  2:1758586/1‑127 (MQ=255)
                                                                                                              tGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctg                          >  2:201143/1‑140 (MQ=255)
                                                                                                              tGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctg                          >  1:718683/1‑140 (MQ=255)
                                                                                                                cGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgct                        >  1:1631882/1‑140 (MQ=255)
                                                                                                                cGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgct                        >  2:2394012/1‑140 (MQ=255)
                                                                                                                cGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgct                        >  1:1196688/1‑140 (MQ=255)
                                                                                                                 ggCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgctg                       >  1:2539479/1‑140 (MQ=255)
                                                                                                                 ggCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgctg                       >  1:2455768/1‑140 (MQ=255)
                                                                                                                  gcaaGCATTGCGCCGGCGAAAAATCCCCCCTGCCCGT‑AAAACATGCCGTTAACCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg                      <  2:2320399/137‑1 (MQ=255)
                                                                                                                   ccAGCATGGCCCCCGCGAAAAATACCCCCTGACCGC‑AAAACAGGCCGTTAATCCACCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGc                     <  2:2580412/140‑1 (MQ=255)
                                                                                                                    cAGCATTGCGCCAGCGAAAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCg                    <  1:1587700/140‑1 (MQ=255)
                                                                                                                     aGCATTGCGCCAGCGAGAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  1:2173213/140‑1 (MQ=255)
                                                                                                                     aGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  1:1142027/140‑1 (MQ=255)
                                                                                                                     aGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   >  2:2232344/1‑140 (MQ=255)
                                                                                                                     aGCATTGCGCCAGCGAAAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  1:2565487/140‑1 (MQ=255)
                                                                                                                     aGCATGGCCCCAGGGAAAAATCCCCCCTACCCGT‑AAAACATGCCGTTAATCCACCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa                   <  2:1340333/140‑1 (MQ=255)
                                                                                                                      gCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAc                  >  2:690819/1‑140 (MQ=255)
                                                                                                                      gCATTGCCCCAGGGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAc                  <  2:1087426/140‑1 (MQ=255)
                                                                                                                       gcgtGCGCGAGGGAAAAATCCCCCCTG‑CCGTAAAAACATGCGGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 <  2:2539479/137‑1 (MQ=255)
                                                                                                                       cATTGCGCCAGCGAGAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 <  1:1827580/140‑1 (MQ=255)
                                                                                                                       cATTGCCCAAGCAAAAAACCCCCCCTGCCCGC‑AAAACATGCCGTTAATCCAGCCGCCCAGCAAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 <  2:2455768/140‑1 (MQ=255)
                                                                                                                       cATGGCGCAAGGGAGAAATCCCCCCTGACCGT‑AAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct                 <  1:2735523/140‑1 (MQ=255)
                                                                                                                         ttGCGCCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct               <  1:1720163/140‑1 (MQ=255)
                                                                                                                         ttGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct               <  1:201143/140‑1 (MQ=255)
                                                                                                                         ttGCCCCAGCGAAAAATCCCCCCTGACCGT‑AAAAAATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct               <  2:1631882/140‑1 (MQ=255)
                                                                                                                          tGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCtt              >  1:519154/1‑140 (MQ=255)
                                                                                                                          tGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCtt              >  1:586624/1‑140 (MQ=255)
                                                                                                                           gcgcCAGCGAGAAACCCCCCCTGCCCGA‑AAACCATGCCGTTAACCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt             <  2:1997565/140‑1 (MQ=255)
                                                                                                                             gcCAGCGAGAAATCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTAc           <  1:1297950/140‑1 (MQ=255)
                                                                                                                             gcCAGCGAAAAATCCCCCCTGCCCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTAc           <  1:632193/140‑1 (MQ=255)
                                                                                                                                 gCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGAt       >  1:659906/1‑140 (MQ=255)
                                                                                                                                      aaaTCCCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTg  <  1:1630010/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                        
AGCAAACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCTGACCGT‑CAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTG  >  NC_000913/445420‑445693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑