BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,222,363	G→T	P91Q (CCG→CAG)	ymgD ←	PF16456 family protein YmgD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,222,363	0	G	T	100.0%	378.0 / NA	105	P91Q (CCG→CAG)	ymgD	PF16456 family protein YmgD
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (59/46); total (59/46)

Only 100 of 106 total aligned reads displayed.

GGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAACCTGTGCGCTGT  >  NC_000913/1222228‑1222498

ggCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTc                                                                                                                                     >  1:1080663/1‑140 (MQ=255)

ggCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTc                                                                                                                                     >  2:1979578/1‑140 (MQ=255)

  ccaaaaaTATCACTTCTCACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCtt                                                                                                                                   <  2:1080663/136‑1 (MQ=255)

  ccTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCtt                                                                                                                                   >  2:2132508/1‑140 (MQ=255)

     gAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAg                                                                                                                                >  1:1052163/1‑140 (MQ=255)

      aaaTATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAgc                                                                                                                               >  2:105842/1‑140 (MQ=255)

       aaTATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAgcg                                                                                                                              <  1:2132508/140‑1 (MQ=255)

          ataATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCaa                                                                                                                           <  2:2085653/140‑1 (MQ=255)

           taAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCaaa                                                                                                                          >  1:938998/1‑140 (MQ=255)

                tCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGa                                                                                                                     >  2:676653/1‑140 (MQ=255)

                tCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGa                                                                                                                     >  1:1194592/1‑140 (MQ=255)

                tCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGa                                                                                                                     <  1:1867653/140‑1 (MQ=255)

                 cTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGAt                                                                                                                    >  1:97700/1‑140 (MQ=255)

                 cTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGAt                                                                                                                    <  1:1740460/140‑1 (MQ=255)

                   gATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTc                                                                                                                  <  1:676653/140‑1 (MQ=255)

                   gATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTc                                                                                                                  >  1:168864/1‑140 (MQ=255)

                    aTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCa                                                                                                                 <  1:105842/140‑1 (MQ=255)

                       ccgccgTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGtt                                                                                                              <  1:2163106/140‑1 (MQ=255)

                              tAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTc                                                                                                          <  1:473713/137‑1 (MQ=255)

                              tAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTc                                                                                                          >  2:473713/1‑137 (MQ=255)

                                       aaCCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGgc                                                                                              >  1:458817/1‑140 (MQ=255)

                                        aCCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGgcg                                                                                             <  2:521828/140‑1 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           >  1:1598350/1‑140 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           <  2:1194592/140‑1 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           <  2:1278379/140‑1 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           <  1:334184/140‑1 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           <  1:1979578/140‑1 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           >  1:1750512/1‑140 (MQ=255)

                                          cgcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCt                                                                                           <  1:1710984/140‑1 (MQ=255)

                                           gcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAGCAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTc                                                                                          >  2:1878569/1‑140 (MQ=255)

                                           gcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTc                                                                                          >  1:1897847/1‑140 (MQ=255)

                                           gcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTc                                                                                          >  1:196840/1‑140 (MQ=255)

                                           gcgTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTc                                                                                          >  1:1695465/1‑140 (MQ=255)

                                            cgtcgtATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCa                                                                                         >  2:1746948/1‑140 (MQ=255)

                                            cgtcgtATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCa                                                                                         <  2:2000928/140‑1 (MQ=255)

                                                   ttCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCgg                                                                                  <  1:2110816/140‑1 (MQ=255)

                                                           cgcgGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCt                                                                          >  2:879165/1‑140 (MQ=255)

                                                                  cATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCt                                                                          >  2:1533536/1‑133 (MQ=255)

                                                                  cATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCt                                                                          <  1:1533536/133‑1 (MQ=255)

                                                                  cATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAAtttt                                                                   <  2:1695465/140‑1 (MQ=255)

                                                                     atGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCt                                                                          >  1:647704/1‑130 (MQ=255)

                                                                     atGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCt                                                                          <  2:647704/130‑1 (MQ=255)

                                                                     atGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTaa                                                                >  1:49868/1‑140 (MQ=255)

                                                                          atatTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAAt                                                              >  2:2174898/1‑137 (MQ=255)

                                                                          atatTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAAt                                                              <  1:2174898/137‑1 (MQ=255)

                                                                          atatTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCAc                                                           >  1:310228/1‑140 (MQ=255)

                                                                          atatTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCAc                                                           >  1:1483799/1‑140 (MQ=255)

                                                                          atatTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCAc                                                           >  1:1820871/1‑140 (MQ=255)

                                                                            attattTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACgg                                                         >  1:677438/1‑140 (MQ=255)

                                                                            attattTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACgg                                                         >  1:1367500/1‑140 (MQ=255)

                                                                             ttattTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGc                                                        >  1:1121524/1‑140 (MQ=255)

                                                                              tattTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCt                                                       >  2:715195/1‑140 (MQ=255)

                                                                              tattTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCt                                                       <  2:310228/140‑1 (MQ=255)

                                                                                ttttttGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTgg                                                     >  2:1236686/1‑140 (MQ=255)

                                                                                 tttttGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGc                                                    <  2:168864/140‑1 (MQ=255)

                                                                                     tGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACg                                                <  2:196840/140‑1 (MQ=255)

                                                                                     tGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACg                                                <  2:1897847/140‑1 (MQ=255)

                                                                                      gCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGc                                               <  2:458817/140‑1 (MQ=255)

                                                                                      gCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGc                                               <  2:938998/140‑1 (MQ=255)

                                                                                      gCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGc                                               <  1:2112689/140‑1 (MQ=255)

                                                                                       ccGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCt                                              <  1:1666374/140‑1 (MQ=255)

                                                                                         gATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTgg                                            <  2:208459/140‑1 (MQ=255)

                                                                                           tAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGca                                          <  2:677438/140‑1 (MQ=255)

                                                                                           tAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGca                                          <  1:1878569/140‑1 (MQ=255)

                                                                                           tAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGca                                          <  2:1057330/140‑1 (MQ=255)

                                                                                            aGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcat                                         <  1:1669323/140‑1 (MQ=255)

                                                                                            aGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcat                                         >  1:1330854/1‑140 (MQ=255)

                                                                                            aGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcat                                         <  1:1136063/140‑1 (MQ=255)

                                                                                                   aTGGTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcattacccat                                  <  1:1874959/140‑1 (MQ=255)

                                                                                                     ggTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcattacccatta                                >  2:1071100/1‑140 (MQ=255)

                                                                                                     ggTGTCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcattacccatta                                >  1:1527547/1‑140 (MQ=255)

                                                                                                      gtgtCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGcattacccattac                               <  2:1330854/140‑1 (MQ=255)

                                                                                                        gtCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCg                             >  2:14227/1‑140 (MQ=255)

                                                                                                        gtCATCAATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCg                             >  2:580570/1‑140 (MQ=255)

                                                                                                         tcatcaATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGc                            >  1:342676/1‑140 (MQ=255)

                                                                                                          catcaATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGca                           <  2:342676/140‑1 (MQ=255)

                                                                                                           atcaATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaa                          >  2:585069/1‑140 (MQ=255)

                                                                                                           atcaATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaa                          >  2:1754393/1‑140 (MQ=255)

                                                                                                           atcaATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaa                          >  1:1423216/1‑140 (MQ=255)

                                                                                                             caATTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaaca                        <  1:1873213/140‑1 (MQ=255)

                                                                                                               aTTGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAAt                      >  2:1333049/1‑140 (MQ=255)

                                                                                                                ttGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaacaa                       <  1:1027421/138‑1 (MQ=255)

                                                                                                                ttGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaacaa                       >  2:1027421/1‑138 (MQ=255)

                                                                                                                 tGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAAttt                    >  2:611552/1‑140 (MQ=255)

                                                                                                                 tGCCGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAAttt                    >  2:1363211/1‑140 (MQ=255)

                                                                                                                   ccGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaacaa                       <  1:849637/135‑1 (MQ=255)

                                                                                                                   ccGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaacaa                       >  2:849637/1‑135 (MQ=255)

                                                                                                                   ccGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCt                  >  1:147601/1‑140 (MQ=255)

                                                                                                                   ccGTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCt                  >  2:1151111/1‑140 (MQ=255)

                                                                                                                     gTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaacaa                       <  2:2180343/133‑1 (MQ=255)

                                                                                                                     gTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGcaacaa                       >  1:2180343/1‑133 (MQ=255)

                                                                                                                     gTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGc                <  2:1121524/140‑1 (MQ=255)

                                                                                                                     gTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGc                >  1:421763/1‑140 (MQ=255)

                                                                                                                     gTGATCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGc                >  1:647361/1‑140 (MQ=255)

                                                                                                                        aTCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAAc             >  2:205017/1‑140 (MQ=255)

                                                                                                                        aTCAACAGCATTTGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAAc             >  2:1336680/1‑140 (MQ=255)

                                                                                                                                  tttGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAACCTGTGCGCTg   >  2:2077719/1‑140 (MQ=255)

                                                                                                                                  tttGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAACCTGTGCGCTg   >  2:1915222/1‑140 (MQ=255)

                                                                                                                                   ttGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAACCTGTGCGCTGt  >  2:419114/1‑140 (MQ=255)

                                                                                                                                   ttGCTGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAACCTGTGCGCTGt  >  1:1581662/1‑140 (MQ=255)

GGCCTGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTGATTCAGTTTTTCTACCACTTTGGCGCTCAGTTCCGGAGATTGCTCAATTTTTAAATCACGGCTGGCAACGCTGGCATTACCCATTACCGCAACAATTTCTGCAACCTGTGCGCTGT  >  NC_000913/1222228‑1222498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`