BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,521,123	T→C	Y648C (TAC→TGC)	yncD ←	putative TonB‑dependent outer membrane receptor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,521,123	0	T	C	100.0%	512.6 / NA	138	Y648C (TAC→TGC)	yncD	putative TonB‑dependent outer membrane receptor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/74); total (64/74)

Only 100 of 138 total aligned reads displayed.

CATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGTAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTCCGGTACAT  >  NC_000913/1520987‑1521255

cATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAt                                                                                                                                   <  2:833789/140‑1 (MQ=255)

cATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAt                                                                                                                                   <  2:1119577/140‑1 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  >  2:1186366/1‑140 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  <  2:1571794/140‑1 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  <  2:2154316/140‑1 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  <  2:2194780/140‑1 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  >  1:2194780/1‑140 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  <  1:1514840/140‑1 (MQ=255)

 aTGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  <  2:481091/140‑1 (MQ=255)

  tGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAt                                                                                                                                   >  1:1148787/1‑138 (MQ=255)

  tGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAt                                                                                                                                   <  2:1148787/138‑1 (MQ=255)

  tGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTg                                                                                                                                 <  1:2086401/140‑1 (MQ=255)

    ccGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  >  1:111910/1‑137 (MQ=255)

    ccGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAtt                                                                                                                                  <  2:111910/137‑1 (MQ=255)

    ccGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTa                                                                                                                               >  2:143446/1‑140 (MQ=255)

      gACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCGAATAAATCCACAGTTAAATTGTGGCAATTGTAtt                                                                                                                             >  2:1742891/1‑140 (MQ=255)

      gACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTAtt                                                                                                                             >  2:1382063/1‑140 (MQ=255)

        cacCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAt                                                                                                                                   >  1:2150624/1‑132 (MQ=255)

        cacCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAAt                                                                                                                                   <  2:2150624/132‑1 (MQ=255)

        cacCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTta                                                                                                                           >  1:992841/1‑140 (MQ=255)

        cacCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTta                                                                                                                           >  1:1145525/1‑140 (MQ=255)

        cacCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTta                                                                                                                           >  1:2784/1‑140 (MQ=255)

        cacCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTta                                                                                                                           >  2:47508/1‑140 (MQ=255)

                     tCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAAt                                                                                                               >  1:1790063/1‑139 (MQ=255)

                     tCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAAt                                                                                                               <  2:1790063/139‑1 (MQ=255)

                     tCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATa                                                                                                              >  2:1174494/1‑140 (MQ=255)

                     tCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATa                                                                                                              >  1:765884/1‑140 (MQ=255)

                     tCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATa                                                                                                              >  1:2253489/1‑140 (MQ=255)

                       cGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAg                                                                                                            <  2:1707051/140‑1 (MQ=255)

                        gggCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATGTATACCCGGTGAATAAGc                                                                                                           >  1:853485/1‑140 (MQ=255)

                         ggCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGcc                                                                                                          >  2:749616/1‑140 (MQ=255)

                            gAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCGAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgac                                                                                                       <  1:1742891/140‑1 (MQ=255)

                            gAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgac                                                                                                       <  1:1394290/140‑1 (MQ=255)

                            gAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgac                                                                                                       <  1:2095615/140‑1 (MQ=255)

                            gAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgac                                                                                                       <  1:749616/140‑1 (MQ=255)

                            gAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgac                                                                                                       <  2:162674/140‑1 (MQ=255)

                              aGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgacga                                                                                                     <  2:2174885/140‑1 (MQ=255)

                              aGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgacga                                                                                                     <  1:622300/140‑1 (MQ=255)

                              aGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgacga                                                                                                     <  2:765884/140‑1 (MQ=255)

                              aGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgacga                                                                                                     <  2:41061/140‑1 (MQ=255)

                                    gTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCcgacga                                                                                                     >  1:1032901/1‑134 (MQ=255)

                                    gTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGtat                                                                                               >  2:1270563/1‑140 (MQ=255)

                                    gTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGtat                                                                                               >  2:93283/1‑140 (MQ=255)

                                    gTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGtat                                                                                               >  2:1268235/1‑140 (MQ=255)

                                        tatCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGa                                                                                           >  2:1238723/1‑140 (MQ=255)

                                          tCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACg                                                                                         >  1:647641/1‑140 (MQ=255)

                                          tCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACg                                                                                         >  1:433169/1‑140 (MQ=255)

                                           cGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACgg                                                                                        >  1:312041/1‑140 (MQ=255)

                                           cGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACgg                                                                                        <  2:2270686/140‑1 (MQ=255)

                                             cccGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGgcg                                                                                      >  2:2108794/1‑140 (MQ=255)

                                             cccGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGgcg                                                                                      >  1:1435139/1‑140 (MQ=255)

                                              ccGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATGCCCGGTGAATAAGCCGACGAGAGTATAAGACGgcgc                                                                                     >  2:849174/1‑140 (MQ=255)

                                                 tttGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCttt                                                                                  >  1:804338/1‑140 (MQ=255)

                                                  ttGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGCATAAGACGGCGCtgtt                                                                                 >  2:2195098/1‑140 (MQ=255)

                                                           tGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTAttt                                                                        >  2:952017/1‑140 (MQ=255)

                                                              cAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTtca                                                                     <  1:2234137/140‑1 (MQ=255)

                                                                 tGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGcc                                                                              <  2:1320899/128‑1 (MQ=255)

                                                                 tGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGcc                                                                              >  1:1320899/1‑128 (MQ=255)

                                                                 tGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTtcatca                                                                  >  2:261010/1‑140 (MQ=255)

                                                                   aCAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                <  1:1238723/140‑1 (MQ=255)

                                                                   aCAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                <  2:1996818/140‑1 (MQ=255)

                                                                   aCAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                >  2:313590/1‑140 (MQ=255)

                                                                   aCAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                <  1:952017/140‑1 (MQ=255)

                                                                   aCAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                <  2:312041/140‑1 (MQ=255)

                                                                   aCAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                <  2:284958/140‑1 (MQ=255)

                                                                    cAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCt                                                               >  2:1555401/1‑140 (MQ=255)

                                                                       aaCCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGcc                                                            <  2:1435139/140‑1 (MQ=255)

                                                                       aaCCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGcc                                                            >  2:1905621/1‑140 (MQ=255)

                                                                       aaCCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGcc                                                            >  2:1472041/1‑140 (MQ=255)

                                                                        aCCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATGTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCa                                                           <  2:853485/140‑1 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                >  1:1041184/1‑131 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCatcatc                                                                <  2:1041184/131‑1 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataat                                                       >  2:632500/1‑140 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataat                                                       >  2:452924/1‑140 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataat                                                       <  1:375435/140‑1 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataat                                                       <  1:47508/140‑1 (MQ=255)

                                                                            aCGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGGATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataat                                                       >  2:2077109/1‑140 (MQ=255)

                                                                              gTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAatat                                                     <  1:1186366/140‑1 (MQ=255)

                                                                               tATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTACCATAATATc                                                    >  2:2042530/1‑140 (MQ=255)

                                                                                       aTCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataata                                                      >  1:377525/1‑130 (MQ=255)

                                                                                       aTCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCataata                                                      <  2:377525/130‑1 (MQ=255)

                                                                                       aTCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCatat                                            >  1:1177741/1‑140 (MQ=255)

                                                                                           aaTAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGTATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAAcg                                        <  1:571629/140‑1 (MQ=255)

                                                                                           aaTAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAAcg                                        <  1:53108/140‑1 (MQ=255)

                                                                                                         acGACCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTg                          >  1:2076139/1‑140 (MQ=255)

                                                                                                            aCCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAAcgcg                                      >  2:1041097/1‑125 (MQ=255)

                                                                                                            aCCAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAAcgcg                                      <  1:1041097/125‑1 (MQ=255)

                                                                                                              cAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCg                                <  1:1413311/129‑1 (MQ=255)

                                                                                                              cAAATAAATCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATac                     <  1:1905621/140‑1 (MQ=255)

                                                                                                                   aaatCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATaccaacc                <  2:601198/140‑1 (MQ=255)

                                                                                                                    aatCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATaccaacca               <  1:93283/140‑1 (MQ=255)

                                                                                                                      tCCACAGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATc             <  1:926521/140‑1 (MQ=255)

                                                                                                                         acaGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTc          <  2:152941/140‑1 (MQ=255)

                                                                                                                          caGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTcc         <  1:1268235/140‑1 (MQ=255)

                                                                                                                          caGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTcc         <  1:261010/140‑1 (MQ=255)

                                                                                                                           aGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTCCg        >  2:2281148/1‑140 (MQ=255)

                                                                                                                           aGTTAAATTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTCCg        >  2:1645463/1‑140 (MQ=255)

                                                                                                                                 aTTGTGGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTCCGGTACAt  <  2:595262/140‑1 (MQ=255)

                                                                                                                                    gtgGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTCCGGt      >  2:1065033/1‑133 (MQ=255)

                                                                                                                                     tgGCAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTcc         <  1:1267764/129‑1 (MQ=255)

CATGCCGACACCATAATTTCGTCCGGGCGAAGGTTCGTAATATCGCCCGTTTGACTCATTGACAATGACAGAACCAACGTATTCTTTATCGAATAAATTATCGACACGACCAAATAAATCCACAGTTAAATTGTGGTAATTGTATTTATACCCGGTGAATAAGCCGACGAGAGTATAAGACGGCGCTTTTGCCGTATTTTCATCATCTGCCATAATATCGCCCATATAACGCGCTTCCGTGCCTGCATACCAACCATCTTCCGGTACAT  >  NC_000913/1520987‑1521255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`