Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,568,5040TG29.7% 341.5 / 27.7 167T6P (ACC→CCC) mdtMmultidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base T (33/83);  new base G (49/0);  total (84/83)
Fisher's exact test for biased strand distribution p-value = 3.42e-20
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 176 total aligned reads displayed.

CAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAAC  >  NC_000913/4568366‑4568643
                                                                                                                                          |                                                                                                                                              
cagGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTa                                                                                                                                               >  2:641487/1‑140 (MQ=255)
      ccAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaa                                                                                                                                         <  1:1368257/140‑1 (MQ=255)
             gACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCa                                                                                                                                  <  2:389068/140‑1 (MQ=255)
               cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGCGGCATa                                                                                                                                >  2:602475/1‑140 (MQ=255)
                 tCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATaac                                                                                                                              <  1:2153600/140‑1 (MQ=255)
                  cGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATaaca                                                                                                                             >  1:492357/1‑140 (MQ=255)
                    gCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACg                                                                                                                                       <  2:1950250/128‑1 (MQ=255)
                      aTTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTAGCGGCATGGCGGGTAAAAAAACGTGGCATaacaaaca                                                                                                                         <  1:192617/140‑1 (MQ=255)
                        tAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAAGGGATAaaaaacaaa                                                                                                                       >  2:500900/1‑139 (MQ=255)
                               aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGt                                                                                                                >  1:1472654/1‑140 (MQ=255)
                               aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAGGGGATAAAAAAAAAATCCCTGt                                                                                                                >  2:575586/1‑140 (MQ=255)
                               aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGCCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGCAAAAAAACGTGGCATTACAAAAAACTccccgt                                                                                                                >  1:943827/1‑136 (MQ=255)
                                  tACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTcc                                                                                                                    <  2:116299/133‑1 (MQ=255)
                                  tACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTcc                                                                                                                    >  1:116299/1‑133 (MQ=255)
                                  tACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAACAAATCCTTGTCCg                                                                                                             >  2:1731197/1‑140 (MQ=255)
                                       caTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGGTAAAAAAAAAACCCCTTTCCGGA‑G‑aa                                                                                                      >  2:1379406/1‑140 (MQ=255)
                                            aTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAACGGGATAACAAACAACTCCTTGTTCGGA‑G‑AACCCCa                                                                                                 >  1:1385554/1‑140 (MQ=255)
                                             tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCaa                                                                                                <  1:1226290/140‑1 (MQ=255)
                                             tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGCGGGACAACAAAAAAAACCCTGTCCGGA‑G‑AAacccca                                                                                                >  2:1760303/1‑138 (MQ=255)
                                               aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑Cg                                                                                             >  1:2431362/1‑140 (MQ=255)
                                               aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑Cg                                                                                             >  1:1045554/1‑140 (MQ=255)
                                               aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACAGGGCACAACAAAAAACCCCTTGTTCGGA‑G‑AGACCCAA‑ca                                                                                             >  2:619914/1‑139 (MQ=255)
                                                 cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAACAAAAAACCCCTTTTCCGGG‑G‑AACCCCAA‑Cggg                                                                                           >  2:278825/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAACCGCCTAACAAACAACTCCCTGCCCCGG‑G‑AAACCCAA‑Cgggg                                                                                          >  1:58965/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAACAAAAAAACCCTTTTCCGGA‑G‑AAACCCCA‑Agggg                                                                                          >  2:1049456/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACTCCCTGTCCGGA‑G‑AAACCCCA‑Cgggg                                                                                          >  1:2061884/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAACAAAAAAAACCTTGTCCGGAGG‑AACCCAAA‑Cggg                                                                                           >  2:907316/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGGATAACAAAAAACTCCCTTTCCGGG‑GAAACCCCAA‑Cggg                                                                                           >  2:2459603/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAAAAAAAAACCCCCTGTCCGGG‑G‑AAACCCAA‑Cgggg                                                                                          >  2:2006295/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGACGGATGAAAAACAAAACCCTGTCCGGA‑G‑AACCCCaaaaagg                                                                                           >  2:2082143/1‑135 (MQ=255)
                                                   cAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGa                                                                                         <  1:1731197/140‑1 (MQ=255)
                                                   cAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGa                                                                                         <  1:382809/140‑1 (MQ=255)
                                                   cAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGa                                                                                         <  1:381331/140‑1 (MQ=255)
                                                      gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGaaaa                                                                                      <  1:1379406/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACg                                                                                    <  2:201127/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACg                                                                                    <  1:2461355/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACg                                                                                    <  1:1760303/140‑1 (MQ=255)
                                                         ggATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGa                                                                                   >  2:240186/1‑140 (MQ=255)
                                                          gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAACAAAACCTTGTCCGGA‑G‑AACCCCAA‑CCGGGAAAAAGaa                                                                                  >  2:1497711/1‑140 (MQ=255)
                                                          gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGCGGCATAAAAAAAAAATCCTTGTCCGGA‑G‑AACCCCCA‑CCGGGGAAACGaa                                                                                  >  2:2284035/1‑140 (MQ=255)
                                                          gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGACATGGCGGGTAAAAAAAAGTGGCATAACAAACAACACCTTGTCCGGA‑G‑AACCCCAA‑CCGGGGAAAAGaa                                                                                  >  2:247196/1‑140 (MQ=255)
                                                           aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGaaa                                                                                 <  1:278825/140‑1 (MQ=255)
                                                           aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAAAAACACCTTTTCCGGG‑G‑AAACCCAA‑CGGGGGAAAAGaaa                                                                                 >  2:1679157/1‑140 (MQ=255)
                                                           aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAAGGGCCTAAAAAAAAAATCCTTGTCCGGA‑G‑AAACCCAA‑CGGGGGAAAAGaaa                                                                                 >  2:382809/1‑140 (MQ=255)
                                                              aGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGaaaa                                                                                      >  1:1834213/1‑132 (MQ=255)
                                                               gATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCa                                                                             <  1:2370665/140‑1 (MQ=255)
                                                                aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAACACCTTTTCCGGA‑G‑AACCCCCA‑CGGGGAAAACGAAAATCaa                                                                            >  2:465892/1‑140 (MQ=255)
                                                                aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAACAAAAAACTCCTTGTCCGGA‑G‑AAACCCCA‑CGGGGAAAAAGAAAATCaa                                                                            >  2:1999453/1‑140 (MQ=255)
                                                                 tCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAAt                                                                           <  2:1389617/140‑1 (MQ=255)
                                                                 tCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAAt                                                                           <  2:1854688/140‑1 (MQ=255)
                                                                 tCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAAt                                                                           <  2:346002/140‑1 (MQ=255)
                                                                  ccGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATa                                                                          <  1:2393611/140‑1 (MQ=255)
                                                                    gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGG‑GAAAAAACGTGGCATAAAAAAAAAATCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAAATCAATAccc                                                                       >  1:394845/1‑139 (MQ=255)
                                                                     tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAAAAAAAAACTCCCTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAAAGAAAATCAATAccc                                                                       >  2:317200/1‑139 (MQ=255)
                                                                       gACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAAAAAAAAACTCCTTGTCCGGA‑G‑AACCCCCA‑CCGGGGAAACGAAAATCAATACCGTc                                                                     >  2:1547170/1‑140 (MQ=255)
                                                                        aCAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCg                                                                    <  1:1718246/140‑1 (MQ=255)
                                                                          aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAAAGAAAATCAATACCGTCggg                                                                  >  2:731083/1‑139 (MQ=255)
                                                                            aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAT‑CGGGGAAAACGAAATTCAATACCGTCGGTaa                                                                <  1:324554/140‑1 (MQ=255)
                                                                            aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGATaa                                                                <  1:2338786/140‑1 (MQ=255)
                                                                            aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AAACCCCA‑CGGGGAAAACGAAATTCAATACCGTCGGGaa                                                                >  1:1960436/1‑140 (MQ=255)
                                                                              aCGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGGAAAAGAAAATCAATACCGTCGGTAATg                                                              >  2:665264/1‑140 (MQ=255)
                                                                               cGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAAAAAAAAAATCCTTGTCCGGG‑G‑AACCCCAA‑CGGGGGAAACGAAAATCAATACCGTCGGGAATGa                                                             >  2:1044339/1‑140 (MQ=255)
                                                                               cGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCCA‑CGGGGGAAACGAAAATCAATACCGTCGGGAATGa                                                             >  2:2216293/1‑140 (MQ=255)
                                                                                 cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACg                                                           <  1:622025/140‑1 (MQ=255)
                                                                                      aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg                                                      <  1:1049456/140‑1 (MQ=255)
                                                                                      aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg                                                      <  1:500900/140‑1 (MQ=255)
                                                                                      aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAACAAATCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGGAAACGAAAATCAATACCGTCGGGAATGACGaaaag                                                      >  2:1600/1‑138 (MQ=255)
                                                                                      aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAACAGGCGTAAAAAAAAAACCCCTTTCCGGA‑G‑AAACCCAACCGGGGAAAAAAAAATT‑AATACCGTCGGGAATGAAGaaaag                                                      >  2:1232095/1‑138 (MQ=255)
                                                                                         tCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAg                                                   <  2:472640/140‑1 (MQ=255)
                                                                                         tCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAACAAAAAAATCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGGAAAAAAAAATCAATACCGTCGGGAATAACGAAAAGCAg                                                   >  2:1347042/1‑140 (MQ=255)
                                                                                           aTACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt                                                 <  1:1758815/140‑1 (MQ=255)
                                                                                            tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTg                                                <  1:619914/140‑1 (MQ=255)
                                                                                               aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                             <  2:23824/140‑1 (MQ=255)
                                                                                                 aaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAg                                           <  1:2291342/140‑1 (MQ=255)
                                                                                                 aaTCAACGCCATCGGGAAAAACAGCGTGGCGACATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAg                                           <  1:247196/140‑1 (MQ=255)
                                                                                                  aTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAACAAATCCTTTTCCGGA‑G‑AACCCCAA‑AGGGGGAAAAGAAAATCAAAACCGTCGGGAATGAAGAAAAGCAGGGGAGAAgg                                          >  2:1472852/1‑140 (MQ=255)
                                                                                                   tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACTCCTTGTCCGGA‑G‑AAACCCCA‑CGGGGGAAACGAAATTCAAAACCGTCGGGAATGAAGAAAAGCAGGGGAGAAggg                                         >  2:2365939/1‑140 (MQ=255)
                                                                                                   tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAGGGCATAAAAAACAACCCCTTGTCCGGG‑G‑AACCCCAA‑CGGGGGAAAAGAAAATCAATACCGTCGGGAATAAAGCAAGGCAAGTGAGAAagg                                         >  2:442859/1‑140 (MQ=255)
                                                                                                   tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                             <  1:224769/135‑1 (MQ=255)
                                                                                                      aCGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCCTAACAAACAAATCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGGAAAAGAAATTCAAAAACCTCCGGAAAGAAAAAAGGGAGGGGAGAAAGGcct                                      >  2:2018736/1‑138 (MQ=255)
                                                                                                       cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAAATCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAAc                                     <  1:1679157/140‑1 (MQ=255)
                                                                                                       cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAACAAATCCCTTTCCGGA‑G‑AACCCCAA‑CGGGGGAAAAGAAAATCAATACCGTCGGGAATGAAGAAAAGCAGGGGGGAAGGGCaaa                                     >  2:543156/1‑139 (MQ=255)
                                                                                                         ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAAAGAAAATCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGGAACga                                   >  1:661173/1‑140 (MQ=255)
                                                                                                          cATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACgag                                  <  1:1497711/140‑1 (MQ=255)
                                                                                                                 aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa                           <  1:1371727/140‑1 (MQ=255)
                                                                                                                 aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa                           <  1:907316/140‑1 (MQ=255)
                                                                                                                      cAGCGTGGCGGCATGGCGGGT‑AAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTAc                     <  2:394845/140‑1 (MQ=255)
                                                                                                                       aGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTAc                     <  1:549392/140‑1 (MQ=255)
                                                                                                                         cGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAACAACTCCTTTTCCGGA‑G‑AACCCCAA‑CGGGGGAAAAGAAAATCAATAACGTCGGGAATGACGAAAAGCAGGGGAGAAGGGCAAAGAGACTGCAAAAGTACTg                   >  2:1765240/1‑140 (MQ=255)
                                                                                                                           tGGCGGCATGGCGGGTAAAAAAAAGTGGCATAAAAAAAAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGGAAAAGAAAATCAAAACCGTCGGGAATGACGAAAAGCAGGGGAGAAAGGCAAAGAGACTGCAAAAGTACTGaa                 >  2:1636452/1‑140 (MQ=255)
                                                                                                                            ggcggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAAt                <  1:2040749/140‑1 (MQ=255)
                                                                                                                            ggcggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAAt                <  1:187492/140‑1 (MQ=255)
                                                                                                                              cggcATGGCGGGGAAAAAAAAGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCCA‑CGGGGAAAAAGAAAATCAATACCGTCGGGAATGACGAAAAGCAGGGGAGAAGGGCAAAGAGACTGCAAATGTACTGAAttt              >  2:831324/1‑140 (MQ=255)
                                                                                                                               ggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGACAACGAGACTGCAAATGTACTGAATTTc             <  2:1472654/140‑1 (MQ=255)
                                                                                                                                  aTGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATg          <  1:831324/140‑1 (MQ=255)
                                                                                                                                   tGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AA‑CCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa        <  2:273849/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa        <  1:1600/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGCCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa        <  2:58965/140‑1 (MQ=255)
                                                                                                                                        ggTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCa    <  2:2061884/140‑1 (MQ=255)
                                                                                                                                          tAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCTATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAAc  <  1:45759/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                              
CAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAA‑CGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAAC  >  NC_000913/4568366‑4568643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑