BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,994,941	G→T	pseudogene (152/156 nt)	ygeL ←	protein YgeL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,994,941	0	G	T	100.0%	449.0 / NA	127	pseudogene (152/156 nt)	ygeL	protein YgeL
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (68/59); total (68/59)

Only 100 of 128 total aligned reads displayed.

AATTTTATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAA  >  NC_000913/2994806‑2995076

aaTTTTATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGt                                                                                                                                     <  2:1216339/140‑1 (MQ=255)

aaTTTTATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGt                                                                                                                                     <  1:221331/140‑1 (MQ=255)

  ttttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTTGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGt                                                                                                                                     >  2:1203701/1‑138 (MQ=255)

  ttttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGt                                                                                                                                     <  1:1203701/138‑1 (MQ=255)

  ttttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAg                                                                                                                                   <  1:587213/140‑1 (MQ=255)

  ttttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTACACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAg                                                                                                                                   <  1:159372/140‑1 (MQ=255)

    ttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGAt                                                                                                                                 <  2:2244051/140‑1 (MQ=255)

    ttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGAt                                                                                                                                 <  2:1275828/140‑1 (MQ=255)

    ttATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGAt                                                                                                                                 <  1:2371825/140‑1 (MQ=255)

          aaTCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAg                                                                                                                                   <  1:1665750/132‑1 (MQ=255)

          aaTCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAg                                                                                                                                   >  2:1665750/1‑132 (MQ=255)

            tCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         <  2:207416/140‑1 (MQ=255)

            tCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         <  2:1789255/140‑1 (MQ=255)

            tCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         >  2:650715/1‑140 (MQ=255)

            tCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         <  1:1347023/140‑1 (MQ=255)

            tCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         >  1:1789255/1‑140 (MQ=255)

            tCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         >  1:810507/1‑140 (MQ=255)

             cAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTacac                                                                                                                        <  2:87712/140‑1 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTc                                                                                                                      <  2:1835132/135‑1 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTc                                                                                                                      >  1:2465513/1‑135 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTc                                                                                                                      >  1:1835132/1‑135 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTc                                                                                                                      <  2:2465513/135‑1 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCta                                                                                                                 >  1:652579/1‑140 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCta                                                                                                                 <  2:1931234/140‑1 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCta                                                                                                                 <  1:2290500/140‑1 (MQ=255)

                    cGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCta                                                                                                                 >  2:147301/1‑140 (MQ=255)

                     ggCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCtat                                                                                                                >  2:644207/1‑140 (MQ=255)

                       cATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACt                                                                                                                       >  1:1187899/1‑131 (MQ=255)

                       cATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAg                                                                                                              >  2:1892009/1‑140 (MQ=255)

                         tCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCt                                                                                                            <  1:1892009/140‑1 (MQ=255)

                         tCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCt                                                                                                            <  1:417457/140‑1 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCTTCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCtt                                                                                                           >  1:2332956/1‑140 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTaca                                                                                                                         >  1:2002238/1‑126 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCtt                                                                                                           >  2:1335319/1‑140 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCtt                                                                                                           >  2:96708/1‑140 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCtt                                                                                                           >  2:350592/1‑140 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCtt                                                                                                           >  2:2395469/1‑140 (MQ=255)

                          cTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCtt                                                                                                           >  1:1846261/1‑140 (MQ=255)

                            ttGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCta                                                                                                                 >  2:464084/1‑132 (MQ=255)

                              tcTACAAATGTAATAATATGAGCATTTATCTTATGCCAATTAACCCAATCTAAGAGTTCGGTCCACACCAATCCGTCATCAAAATCACCCAAAACAAAAATTTACTTTGTAGATTTGTTACACTCCGCTATAGCTttcta                                                                                                       <  2:2332956/139‑2 (MQ=255)

                                   aaaTGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGAt                                                                                                  <  1:644207/140‑1 (MQ=255)

                                             atatGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGcc                                                                                        >  1:1918080/1‑140 (MQ=255)

                                               atGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGcccc                                                                                      >  1:656342/1‑140 (MQ=255)

                                               atGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGcccc                                                                                      >  2:1055281/1‑140 (MQ=255)

                                                  aGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaa                                                                                   >  1:1458182/1‑140 (MQ=255)

                                                  aGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaa                                                                                   <  2:93389/140‑1 (MQ=255)

                                                  aGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaa                                                                                   <  1:1055281/140‑1 (MQ=255)

                                                  aGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaa                                                                                   >  1:93389/1‑140 (MQ=255)

                                                   gCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaac                                                                                  >  1:887364/1‑140 (MQ=255)

                                                   gCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaa                                                                                   >  1:2257424/1‑139 (MQ=255)

                                                   gCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaa                                                                                   <  2:2257424/139‑1 (MQ=255)

                                                    cATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaaca                                                                                 >  2:1722088/1‑140 (MQ=255)

                                                     atctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTta                                                                                             >  1:1322789/1‑127 (MQ=255)

                                                     atctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTta                                                                                             <  2:1322789/127‑1 (MQ=255)

                                                     atctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCcaacaa                                                                                >  2:756254/1‑140 (MQ=255)

                                                      tctatctTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCaacaac                                                                               >  1:664267/1‑140 (MQ=255)

                                                            ttATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCata                                                                         <  2:544829/140‑1 (MQ=255)

                                                            ttATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCata                                                                         <  1:350592/140‑1 (MQ=255)

                                                               tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATaa                                                                      >  1:1131882/1‑140 (MQ=255)

                                                               tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATaa                                                                      >  1:740644/1‑140 (MQ=255)

                                                               tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATaa                                                                      >  1:1581947/1‑140 (MQ=255)

                                                               tGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATaa                                                                      >  2:161077/1‑140 (MQ=255)

                                                                  gATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATc                                                                   >  1:1480771/1‑140 (MQ=255)

                                                                    tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCAtata                                                                       <  1:2346040/134‑1 (MQ=255)

                                                                    tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCAtata                                                                       >  2:2346040/1‑134 (MQ=255)

                                                                    tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAg                                                                 >  2:1987658/1‑140 (MQ=255)

                                                                    tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAg                                                                 >  1:2421508/1‑140 (MQ=255)

                                                                    tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAg                                                                 >  2:1138316/1‑140 (MQ=255)

                                                                    tttAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAg                                                                 >  2:1179651/1‑140 (MQ=255)

                                                                      tAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCata                                                                         <  2:295425/130‑1 (MQ=255)

                                                                       aaCCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGAt                                                              <  2:1480771/140‑1 (MQ=255)

                                                                              tttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTcc                                                       >  1:2163386/1‑140 (MQ=255)

                                                                              tttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTcc                                                       >  2:611041/1‑140 (MQ=255)

                                                                               ttACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCg                                                      <  1:260776/140‑1 (MQ=255)

                                                                                  cGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCgaga                                                   <  1:611041/140‑1 (MQ=255)

                                                                                    aGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGaaa                                                 <  2:1918080/140‑1 (MQ=255)

                                                                                    aGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGaaa                                                 >  2:739862/1‑140 (MQ=255)

                                                                                    aGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGaaa                                                 <  1:756254/140‑1 (MQ=255)

                                                                                    aGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGaaa                                                 <  2:1131882/140‑1 (MQ=255)

                                                                                       tCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATcc                                              >  1:1190494/1‑140 (MQ=255)

                                                                                        cGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCa                                             >  2:147342/1‑140 (MQ=255)

                                                                                        cGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCa                                             >  2:1416322/1‑140 (MQ=255)

                                                                                            ccccATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTa                                         <  2:1190494/140‑1 (MQ=255)

                                                                                               catcatTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATcc                                      >  2:449155/1‑140 (MQ=255)

                                                                                                  catTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCat                                   <  2:2163386/140‑1 (MQ=255)

                                                                                                  catTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCat                                   <  1:924382/140‑1 (MQ=255)

                                                                                                   atTCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCatc                                  <  2:1581947/140‑1 (MQ=255)

                                                                                                     tCCACCTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCatcaa                                <  2:810507/140‑1 (MQ=255)

                                                                                                         ccTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATc                                       >  2:1117236/1‑129 (MQ=255)

                                                                                                         ccTGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATc                                       <  1:1117236/129‑1 (MQ=255)

                                                                                                           tGCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaa                          >  2:513484/1‑140 (MQ=255)

                                                                                                            gCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaaa                         >  2:1502794/1‑140 (MQ=255)

                                                                                                            gCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaaa                         >  1:656672/1‑140 (MQ=255)

                                                                                                            gCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaaa                         >  1:1444987/1‑140 (MQ=255)

                                                                                                            gCAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATaaa                         >  2:965358/1‑140 (MQ=255)

                                                                                                             cAAATTCTCCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAAc                        >  2:398002/1‑140 (MQ=255)

                                                                                                                   ctcCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGgctgc                  <  1:2480998/140‑1 (MQ=255)

                                                                                                                    tcCTAAAATAAATATTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGgctgct                 <  1:1138316/140‑1 (MQ=255)

                                                                                                                                tatTTAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTa     <  1:281658/140‑1 (MQ=255)

                                                                                                                                   ttAGTCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACaa  >  1:386923/1‑140 (MQ=255)

AATTTTATTGAATCAATATACGGCATCTTTGCTACAAATGTAATAATATGAGCATCTATCTTATGCGATTTAACCCATTTTACGAGTTCGGCCCCCATCATTCCACCTGCAAATTCTCCTAAAATAAATATTTAGGCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCCCATCAATCATAAACGGCTGCTGATCTGAAACTACAA  >  NC_000913/2994806‑2995076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`