| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,736,296 | Δ12 bp | coding (984‑995/1170 nt) | ydhP ← | putative transporter YdhP |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1736296 | 1736307 | 12 | 44 [0] | [0] 44 | ydhP | putative transporter YdhP |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1736295 | 0 (0.000) | 44 (1.140) | 34/276 | 0.2 | 100% | coding (996/1170 nt) | ydhP | putative transporter YdhP |
| ? | NC_000913 | 1736308 = | 0 (0.000) | coding (983/1170 nt) | ydhP | putative transporter YdhP | |||||
GACATAAACACCAGCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCACCAATATTGACTGATGAAGACAGACCTGGCGCTTCACTGGCGACACGCATCACGCGCATCTGTAACGGCGGTACGACCGCAAAGGTTGCTGCGCCCCACACCACCATGCTAATAGCTGCGCCGAACTCATTGCGG > NC_000913/1736164‑1736430 | gACATAAACACCAGCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaaga < 2:470932‑M1/140‑9 (MQ=255) cAGCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAGGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggag > 1:3564‑M1/1‑121 (MQ=255) cAGCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcg > 2:140192‑M1/1‑121 (MQ=255) cAGCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcg > 1:558882‑M1/1‑121 (MQ=255) gCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgct > 2:632219‑M1/1‑119 (MQ=255) cAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgctt > 1:554596‑M1/1‑118 (MQ=255) gCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggc > 1:59721‑M1/1‑111 (MQ=255) aGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgac > 1:126930‑M1/1‑108 (MQ=255) aGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgac > 2:296239‑M1/1‑108 (MQ=255) gTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgaca < 1:140192‑M1/140‑34 (MQ=255) tCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacac > 2:102280‑M1/1‑106 (MQ=255) cgcgACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgca > 1:372809‑M1/1‑103 (MQ=255) gcgACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcat < 1:516314‑M1/140‑39 (MQ=255) cAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCGCCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacg < 1:402243‑M1/140‑43 (MQ=255) cAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacg < 2:370069‑M1/140‑43 (MQ=255) cAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacg < 1:453791‑M1/140‑43 (MQ=255) tCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgc < 1:243520‑M1/140‑46 (MQ=255) tCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgc < 1:211755‑M1/140‑46 (MQ=255) cacaAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggta < 2:59721‑M1/140‑62 (MQ=255) aGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgacc > 1:406766‑M1/1‑74 (MQ=255) cTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgc > 1:164064‑M1/1‑72 (MQ=255) tGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgca < 1:102280‑M1/140‑70 (MQ=255) tATCCCAGTCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaa > 2:192729‑M1/1‑69 (MQ=255) gcccagcGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgct > 2:31851‑M1/1‑62 (MQ=255) gcccagcGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacg < 2:405418‑M1/125‑64 (MQ=255) gcccagcGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacg > 1:405418‑M1/1‑62 (MQ=255) cagcGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcg < 2:554596‑M1/140‑82 (MQ=255) gcGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgcc > 1:307823‑M1/1‑57 (MQ=255) cGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccc > 1:314057‑M1/1‑56 (MQ=255) cGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaagggtgctgcgccc > 2:455545‑M1/1‑56 (MQ=255) gAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgcccca < 2:406766‑M1/140‑87 (MQ=255) gAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgcccca < 2:372809‑M1/140‑87 (MQ=255) aaTTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccaca < 1:540156‑M1/140‑89 (MQ=255) aCCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccac < 2:314057‑M1/140‑93 (MQ=255) gCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctg > 2:645753‑M1/1‑45 (MQ=255) gCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctg < 1:645753‑M1/124‑80 (MQ=255) caccaGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccaca < 2:23643‑M1/129‑89 (MQ=255) caccaGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccaca > 1:23643‑M1/1‑41 (MQ=255) agcagcTGCTCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccaccatgctaatag < 2:598093‑M1/140‑104 (MQ=255) ctCCCAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccaccatgctaatagctgcgccg < 1:632219‑M1/140‑112 (MQ=255) cAGCGCATTTCCAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccaccatgctaatagctgcgccgaact > 1:52141‑M1/1‑25 (MQ=255) cAAGATTAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccaccatgctaatagctgcgccgaactcattgcgggcc < 2:550231‑M1/140‑127 (MQ=255) tAAAGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccaccatgctaatagctgcgccgaactcattgcgggccaggaac > 1:599185‑M1/1‑8 (MQ=255) aGGCAgatgaagacagacctggcgcttcactggcgacacgcatcacgcgcatctgtaacggcggtacgaccgcaaaggttgctgcgccccacaccaccatgctaatagctgcgccgaactcattgcgggccaggaacggg > 1:620706‑M1/1‑5 (MQ=255) | GACATAAACACCAGCAATAATGCCAGTCCCGCGACAATCGCTCCCATCACCGGCACAAAGCTGTATCCCAGCCCAGCGGAAATTACCGCACCACCAGCAGCTGCTCCCAGCGCATTTCCAAGATTAAAGGCACCAATATTGACTGATGAAGACAGACCTGGCGCTTCACTGGCGACACGCATCACGCGCATCTGTAACGGCGGTACGACCGCAAAGGTTGCTGCGCCCCACACCACCATGCTAATAGCTGCGCCGAACTCATTGCGG > NC_000913/1736164‑1736430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |