BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,007,086	C→A	R172L (CGC→CTC)	ycbX ←	6‑N‑hydroxylaminopurine resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,007,086	0	C	A	100.0%	422.7 / NA	116	R172L (CGC→CTC)	ycbX	6‑N‑hydroxylaminopurine resistance protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (53/63); total (53/63)

Only 100 of 117 total aligned reads displayed.

TTTCTGGGCTGACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGCGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACAGTGTTGTGGCGTTTCACGCGCCGG  >  NC_000913/1006955‑1007217

tttCTGGGCTGACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGc                                                                                                                             >  1:37929/1‑140 (MQ=255)

  tCTGGGCTGACGGTGGTGAAAATGCAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTGTTGCCAGGCTGACGCGCAGGAAACCGCCAGATTGGGGATGAATTGCTc                                                                                                                           <  2:1166593/140‑1 (MQ=255)

  tCTGGGCTGACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTc                                                                                                                           <  2:574843/140‑1 (MQ=255)

  tCTGGGCTGACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTc                                                                                                                           <  2:572507/140‑1 (MQ=255)

  tCTGGGCTGACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTc                                                                                                                           <  2:1702690/140‑1 (MQ=255)

          gACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTc                                                                                                                           >  2:951618/1‑132 (MQ=255)

          gACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTc                                                                                                                           <  1:951618/132‑1 (MQ=255)

           aCGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTc                                                                                                                           <  1:982006/131‑1 (MQ=255)

           aCGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTac                                                                                                                  >  1:320065/1‑140 (MQ=255)

           aCGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTac                                                                                                                  >  1:1704892/1‑140 (MQ=255)

                ggtgAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTgg                                                                                                             <  2:1323491/140‑1 (MQ=255)

                  tgAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGcc                                                                                                           >  2:1828857/1‑140 (MQ=255)

                     aaaTACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGa                                                                                                        <  1:1257818/140‑1 (MQ=255)

                      aaTACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTTCATTTTTACACTGGCCGGAc                                                                                                       <  2:1327298/140‑1 (MQ=255)

                       aTACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCA‑TTTTACACTGGCCGGACaa                                                                                                     <  1:427846/140‑1 (MQ=255)

                        tACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACaa                                                                                                     <  1:969320/140‑1 (MQ=255)

                        tACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACaa                                                                                                     <  2:922763/140‑1 (MQ=255)

                         aCAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAAc                                                                                                    <  1:556448/140‑1 (MQ=255)

                          cAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACg                                                                                                   <  2:1158801/140‑1 (MQ=255)

                          cAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACg                                                                                                   <  1:187968/140‑1 (MQ=255)

                            gCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACg                                                                                                   <  2:484697/138‑1 (MQ=255)

                            gCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACg                                                                                                   >  1:484697/1‑138 (MQ=255)

                              ggCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTaca                                                                                                                 >  2:980625/1‑122 (MQ=255)

                              ggCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTaca                                                                                                                 <  1:980625/122‑1 (MQ=255)

                              ggCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACgttgt                                                                                               >  1:1535470/1‑140 (MQ=255)

                              ggCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGACTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACgttgt                                                                                               >  1:87677/1‑140 (MQ=255)

                              ggCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTT‑CCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACgttgtt                                                                                              <  1:1480920/140‑1 (MQ=255)

                               gCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACgttgtt                                                                                              >  2:678389/1‑140 (MQ=255)

                               gCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACgttgtt                                                                                              >  2:1357872/1‑140 (MQ=255)

                               gCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACgttgtt                                                                                              <  1:909771/140‑1 (MQ=255)

                                cTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGttgttg                                                                                             >  1:326745/1‑140 (MQ=255)

                                cTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGttgttg                                                                                             >  1:1302757/1‑140 (MQ=255)

                                  aCAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATGGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGga                                                                                           <  1:230288/140‑1 (MQ=255)

                                     aGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGAt                                                                                        <  2:17433/140‑1 (MQ=255)

                                     aGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGAt                                                                                        <  1:527808/140‑1 (MQ=255)

                                          tAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGt                                                                                   >  2:364673/1‑140 (MQ=255)

                                          tAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGt                                                                                   >  1:1456489/1‑140 (MQ=255)

                                           aaCCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTa                                                                                  >  1:898407/1‑140 (MQ=255)

                                           aaCCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTa                                                                                  >  2:1287103/1‑140 (MQ=255)

                                               acaTCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGa                                                                              <  1:312244/140‑1 (MQ=255)

                                                caTCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAg                                                                             >  1:279524/1‑140 (MQ=255)

                                                 aTCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATc                                                                                       >  1:1248734/1‑129 (MQ=255)

                                                 aTCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAgg                                                                            >  2:1447441/1‑140 (MQ=255)

                                                  tCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGc                                                                           >  1:270602/1‑140 (MQ=255)

                                                      actccacATCAGCAATGCGAATCGCTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCg                                                                       <  2:1819101/137‑1 (MQ=255)

                                                      acacCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCg                                                                       >  1:1157466/1‑140 (MQ=255)

                                                       caccacATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGt                                                                      <  2:1188416/140‑1 (MQ=255)

                                                           acaTCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGc                                                                  >  2:1338047/1‑140 (MQ=255)

                                                            caTCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCa                                                                 <  1:1447441/140‑1 (MQ=255)

                                                            caTCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCa                                                                 >  2:377447/1‑140 (MQ=255)

                                                            caTCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCa                                                                 <  1:1700226/140‑1 (MQ=255)

                                                             aTCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCaa                                                                <  2:82524/140‑1 (MQ=255)

                                                              tCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCaag                                                               >  2:1557802/1‑140 (MQ=255)

                                                               cACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCaaga                                                              >  2:675207/1‑140 (MQ=255)

                                                               cACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCaaga                                                              >  2:1537329/1‑140 (MQ=255)

                                                                 ccAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCaagaag                                                            <  1:928244/140‑1 (MQ=255)

                                                                  cAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAgg                                                           >  2:901078/1‑140 (MQ=255)

                                                                   aaTGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGt                                                          <  2:37929/140‑1 (MQ=255)

                                                                   aaTGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGt                                                          <  2:320065/140‑1 (MQ=255)

                                                                   aaTGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGAACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGt                                                          <  1:1828857/140‑1 (MQ=255)

                                                                    aTGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTa                                                         >  2:213143/1‑140 (MQ=255)

                                                                    aTGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTa                                                         >  1:1073521/1‑140 (MQ=255)

                                                                    aTGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTa                                                         >  1:1191471/1‑140 (MQ=255)

                                                                     tGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTaa                                                        >  1:424369/1‑140 (MQ=255)

                                                                       cGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAgg                                                      >  2:534146/1‑140 (MQ=255)

                                                                       cGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAgg                                                      >  2:1098363/1‑140 (MQ=255)

                                                                         aaTCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGt                                                          <  1:579735/134‑1 (MQ=255)

                                                                         aaTCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGt                                                          >  2:579735/1‑134 (MQ=255)

                                                                          aTCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATa                                                   >  2:678265/1‑140 (MQ=255)

                                                                          aTCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATa                                                   >  2:457048/1‑140 (MQ=255)

                                                                            cACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGc                                                 <  1:1098363/140‑1 (MQ=255)

                                                                            cACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGc                                                 >  2:198875/1‑140 (MQ=255)

                                                                               tttCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCAt                                              <  1:1630856/140‑1 (MQ=255)

                                                                               tttCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCAt                                              <  2:1157466/140‑1 (MQ=255)

                                                                               tttCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCAt                                              >  1:189753/1‑140 (MQ=255)

                                                                                ttCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATc                                             >  1:900128/1‑140 (MQ=255)

                                                                                        aTCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATg                                     >  1:840626/1‑140 (MQ=255)

                                                                                         tcttctTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGa                                    <  2:35228/140‑1 (MQ=255)

                                                                                            tcttcCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACag                                 <  2:718443/140‑1 (MQ=255)

                                                                                            tcttcCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACag                                 <  1:1146038/140‑1 (MQ=255)

                                                                                            tcttcCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACag                                 <  1:1338047/140‑1 (MQ=255)

                                                                                            tcttcCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACag                                 <  2:1073521/140‑1 (MQ=255)

                                                                                            tcttcCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACag                                 <  1:678265/140‑1 (MQ=255)

                                                                                             cttcCCAGGCTGACGCGCCGGAAACCACCAGATTGGGTAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACaga                                >  2:1786694/1‑140 (MQ=255)

                                                                                                cccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGt                             <  1:534146/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGTAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  1:1786694/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  2:1667738/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  2:1456489/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  1:1357872/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  2:1302757/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  1:457048/140‑1 (MQ=255)

                                                                                                 ccAGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTa                            <  1:678389/140‑1 (MQ=255)

                                                                                                   aGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACa                          >  1:1026221/1‑140 (MQ=255)

                                                                                                   aGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACa                          <  2:900128/140‑1 (MQ=255)

                                                                                                   aGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACa                          <  1:1537329/140‑1 (MQ=255)

                                                                                                   aGGCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACa                          >  2:1107428/1‑140 (MQ=255)

                                                                                                    ggCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACAg                         >  1:1016321/1‑140 (MQ=255)

                                                                                                     gCTGACGCGCCGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACAgt                        >  2:80886/1‑140 (MQ=255)

                                                                                                               cGGAAACCACCAGATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACAGTGTTGTGGCGt              >  2:496207/1‑140 (MQ=255)

                                                                                                                           gATTGGGGAGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACAGTGTTGTGGCGTTTCACGCGCCgg  <  1:377447/140‑1 (MQ=255)

TTTCTGGGCTGACGGTGGTGAAAATACAGCGGCTACAAGGTTTAACCACATCAAACACCACATCACCAATGCGAATCACTTTCCAGCGATCTTCTTCCCAGGCTGACGCGCCGGAAACCACCAGATTGGGGCGGAATTGCTCCATTTTTACACTGGCCGGACAACGTTGTTGGAGATCACGTAACGAGGCTTCGTTAGCAAGAAGGTAAGGATAGCCATCAGCAAATGACAGAGGTACAGTGTTGTGGCGTTTCACGCGCCGG  >  NC_000913/1006955‑1007217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`