BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,188,233	T→C	Y3C (TAC→TGC)	roxA ←	ribosomal protein‑arginine oxygenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,188,233	0	T	C	100.0%	434.3 / NA	117	Y3C (TAC→TGC)	roxA	ribosomal protein‑arginine oxygenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (51/66); total (51/66)

Only 100 of 119 total aligned reads displayed.

TTCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGTATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATCCGCG  >  NC_000913/1188097‑1188368

ttCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCAtt                                                                                                                                      <  2:327713/140‑1 (MQ=255)

ttCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCAtt                                                                                                                                      <  2:875318/140‑1 (MQ=255)

ttCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCAtt                                                                                                                                      <  1:991493/140‑1 (MQ=255)

ttCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCAtt                                                                                                                                      <  2:354417/140‑1 (MQ=255)

 tCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTc                                                                                                                                     <  1:634797/140‑1 (MQ=255)

 tCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTc                                                                                                                                     <  2:673960/140‑1 (MQ=255)

   gCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCa                                                                                                                                   <  1:658850/140‑1 (MQ=255)

   gCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCa                                                                                                                                   >  2:235918/1‑140 (MQ=255)

    cTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCAt                                                                                                                                  >  1:1820793/1‑140 (MQ=255)

     tttCCATCGCCAGACCCACCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATg                                                                                                                                 >  1:1270486/1‑140 (MQ=255)

      ttCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACTCCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGt                                                                                                                                <  2:1404881/140‑1 (MQ=255)

          aTCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAg                                                                                                                            <  1:698002/140‑1 (MQ=255)

                aGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCca                                                                                                                      <  2:714424/140‑1 (MQ=255)

                aGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCca                                                                                                                      <  2:1539393/140‑1 (MQ=255)

                aGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCca                                                                                                                      <  2:1668440/140‑1 (MQ=255)

                aGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCca                                                                                                                      <  1:964186/140‑1 (MQ=255)

                 gACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCcac                                                                                                                     >  2:1737223/1‑140 (MQ=255)

                  aCCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCcaca                                                                                                                    <  2:1259191/140‑1 (MQ=255)

                              gTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTg                                                                                                        <  2:1820793/140‑1 (MQ=255)

                              gTCTGGAGAGATCGAGTAAATAAAATTATTAAAGCCGCGTTTTAACACCGCCAGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGTCAGTTAAGAGTGAGGGGGCATTCTATGTTAAGCATCCACAGGCTGGTATCTg                                                                                                        <  2:1528128/140‑1 (MQ=255)

                                 tGGAGAGATCGGGTCAATAAAATTATTAAAGCTGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCaa                                                                                                     <  1:660015/140‑1 (MQ=255)

                                  ggAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAAc                                                                                                    <  1:1448809/140‑1 (MQ=255)

                                    agagaTCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCg                                                                                                  >  2:1188836/1‑140 (MQ=255)

                                    agagaTCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGATAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCg                                                                                                  <  2:37742/140‑1 (MQ=255)

                                        aTCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCaa                                                                                                     >  2:834537/1‑133 (MQ=255)

                                        aTCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCaa                                                                                                     <  1:834537/133‑1 (MQ=255)

                                        aTCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATta                                                                                              >  2:183399/1‑140 (MQ=255)

                                        aTCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATta                                                                                              >  1:1777395/1‑140 (MQ=255)

                                         tCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATtat                                                                                             >  1:350630/1‑140 (MQ=255)

                                          cGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATtata                                                                                            >  2:534481/1‑140 (MQ=255)

                                             gTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACg                                                                                         >  1:347602/1‑140 (MQ=255)

                                             gTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGACCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACg                                                                                         >  1:1334652/1‑140 (MQ=255)

                                              tCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        <  1:549623/140‑1 (MQ=255)

                                              tCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        <  2:1478498/140‑1 (MQ=255)

                                              tCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        <  2:1263685/140‑1 (MQ=255)

                                              tCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        <  1:401220/140‑1 (MQ=255)

                                              gcAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        <  1:1297478/139‑1 (MQ=255)

                                                aaTAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        <  2:239979/138‑1 (MQ=255)

                                                aaTAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACgg                                                                                        >  1:239979/1‑138 (MQ=255)

                                                  tAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCg                                                                                                  >  1:721088/1‑126 (MQ=255)

                                                  tAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCg                                                                                                  <  2:721088/126‑1 (MQ=255)

                                                  tAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGc                                                                                    >  1:1374661/1‑140 (MQ=255)

                                                   aaaaTTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCt                                                                                   <  2:1186672/140‑1 (MQ=255)

                                                       ttattaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAAc                                                                               >  1:904622/1‑140 (MQ=255)

                                                       ttattaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAAc                                                                               >  1:817387/1‑140 (MQ=255)

                                                         attaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGt                                                                             <  1:719345/140‑1 (MQ=255)

                                                          ttaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGc                                                                                    >  1:1158097/1‑132 (MQ=255)

                                                          ttaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTa                                                                            <  2:1302732/140‑1 (MQ=255)

                                                          ttaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTa                                                                            >  1:81120/1‑140 (MQ=255)

                                                          ttaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTa                                                                            <  2:280783/140‑1 (MQ=255)

                                                          ttaAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTa                                                                            >  1:1052814/1‑140 (MQ=255)

                                                           taAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTaa                                                                           <  1:968284/140‑1 (MQ=255)

                                                               gCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCg                                                                       <  2:646212/140‑1 (MQ=255)

                                                               gCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCg                                                                       <  2:618941/140‑1 (MQ=255)

                                                               gCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCg                                                                       <  2:350630/140‑1 (MQ=255)

                                                               gCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGAGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCg                                                                       >  1:1701705/1‑140 (MQ=255)

                                                                 cgcgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTaa                                                                           <  1:1228372/134‑1 (MQ=255)

                                                                 cgcgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTaa                                                                           >  2:1228372/1‑134 (MQ=255)

                                                                 cgcgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTg                                                                     <  2:347602/140‑1 (MQ=255)

                                                                 cgcgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTg                                                                     >  2:97992/1‑140 (MQ=255)

                                                                 cgcgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTg                                                                     <  2:1034949/140‑1 (MQ=255)

                                                                 cgcgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTg                                                                     <  1:534481/140‑1 (MQ=255)

                                                                 agagTTTTAACACCACTGGGCGTTTCTGCCAGTGCCGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGCTGGTATTCCATGTTAAGCATCCACAGGCTGGTATCTGCACCCGATTATAACGGATGCTTAACGTAATGCGTg                                                                     <  2:550691/137‑1 (MQ=255)

                                                                   cgTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGaa                                                                   >  2:941543/1‑140 (MQ=255)

                                                                    gTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTaa                                                                           >  1:1071446/1‑131 (MQ=255)

                                                                    gTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTaa                                                                           <  2:1071446/131‑1 (MQ=255)

                                                                     ttttAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGt                                                                 <  2:1270486/140‑1 (MQ=255)

                                                                     ttttAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGt                                                                 <  1:111999/140‑1 (MQ=255)

                                                                      tttAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTa                                                                <  2:81120/140‑1 (MQ=255)

                                                                          acacCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATggg                                                            <  1:1028883/140‑1 (MQ=255)

                                                                          acacCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATggg                                                            <  1:272126/140‑1 (MQ=255)

                                                                            accaccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCa                                                          <  1:272171/140‑1 (MQ=255)

                                                                             ccaccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCat                                                         <  1:694564/140‑1 (MQ=255)

                                                                             ccaccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGACCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCat                                                         <  2:1334652/140‑1 (MQ=255)

                                                                              caccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCata                                                        >  1:960140/1‑140 (MQ=255)

                                                                              caccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCata                                                        >  1:547128/1‑140 (MQ=255)

                                                                                ccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCAtatt                                                      >  1:943928/1‑140 (MQ=255)

                                                                                ccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCAtatt                                                      >  2:100185/1‑140 (MQ=255)

                                                                                ccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCAtatt                                                      >  1:1124642/1‑140 (MQ=255)

                                                                                ccGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCAGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCAtatt                                                      >  1:1300728/1‑140 (MQ=255)

                                                                                   ggCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTCATGCGTGAAGTATggg                                                            <  2:1613158/131‑1 (MQ=255)

                                                                                   ggCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATggg                                                            >  1:1613158/1‑131 (MQ=255)

                                                                                      gTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCa                                                <  1:186007/140‑1 (MQ=255)

                                                                                          cTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTTACGTAATGCGTGAAGTATGGGCATATTTATTCATCtt                                            >  2:1617340/1‑140 (MQ=255)

                                                                                           tGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCttt                                           <  1:264844/140‑1 (MQ=255)

                                                                                                gTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGgcg                                      <  2:943928/140‑1 (MQ=255)

                                                                                                gTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGgcg                                      <  2:904622/140‑1 (MQ=255)

                                                                                                gTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGgcg                                      <  2:1187459/140‑1 (MQ=255)

                                                                                                  gACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCa                                    >  1:564751/1‑140 (MQ=255)

                                                                                                           gAAAATCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTgg                           >  1:970154/1‑140 (MQ=255)

                                                                                                               aTCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGAc                       >  2:1549287/1‑140 (MQ=255)

                                                                                                               aTCGGGCCAGTTAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGAc                       >  1:784685/1‑140 (MQ=255)

                                                                                                                          tAAGAGTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCAcc            >  1:1618198/1‑140 (MQ=255)

                                                                                                                            agagTGAGTTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTc          <  2:547128/140‑1 (MQ=255)

                                                                                                                              agtgagtTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCa        >  2:264775/1‑140 (MQ=255)

                                                                                                                                 gagtTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATcc     >  1:218010/1‑140 (MQ=255)

                                                                                                                                  agtTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATCcg    >  2:1229477/1‑140 (MQ=255)

                                                                                                                                   gtTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATCcgc   >  2:1499434/1‑140 (MQ=255)

                                                                                                                                   gtTGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATCcgc   >  1:1434244/1‑140 (MQ=255)

                                                                                                                                    ttGGCATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACTGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATCcgcg  <  2:1739357/140‑1 (MQ=255)

TTCGCTTTCCATCGCCAGACCCGCCAACTCGTCTGGAGAGATCGGGTCAATAAAATTATTAAAGCCGCGTTTTAACACCACCGGGCGTTTCTGCCAGTGACGTTCAAGAAAATCGGGCCAGTTAAGAGTGAGTTGGTATTCCATGTTAAGCATCCACAGGCTGGTATCTGCAACCGATTATAACGGATGCTTAACGTAATGCGTGAAGTATGGGCATATTTATTCATCTTTCGGCGCAGAATGCTGGCGACCAAAAATCACCTCCATCCGCG  >  NC_000913/1188097‑1188368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`