BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,227,171	A→G	L101P (CTC→CCC)	pliG ←	inhibitor of g‑type lysozyme

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,227,171	0	A	G	100.0%	428.2 / NA	116	L101P (CTC→CCC)	pliG	inhibitor of g‑type lysozyme
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/61); total (55/61)

Only 100 of 120 total aligned reads displayed.

ACGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGACCTTTTTTGG  >  NC_000913/1227035‑1227306

aCGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgggtg                                                                                                                                      >  1:1762561/1‑140 (MQ=255)

aCGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgggtg                                                                                                                                      >  2:529363/1‑140 (MQ=255)

  gTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGgggtgag                                                                                                                                    <  2:221604/140‑1 (MQ=255)

    ttATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTa                                                                                                                                  <  2:1771500/140‑1 (MQ=255)

    ttATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTa                                                                                                                                  <  1:1135720/140‑1 (MQ=255)

    ttATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTa                                                                                                                                  <  1:529363/140‑1 (MQ=255)

     tATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTAt                                                                                                                                 >  1:1066622/1‑140 (MQ=255)

         aCGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTc                                                                                                                             <  2:1288482/140‑1 (MQ=255)

              gagaGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGa                                                                                                                        <  1:1715518/140‑1 (MQ=255)

               agagTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGAc                                                                                                                       >  2:150437/1‑140 (MQ=255)

                   tCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCg                                                                                                                           >  2:1324412/1‑132 (MQ=255)

                   tCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCg                                                                                                                           <  1:1324412/132‑1 (MQ=255)

                     cccGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGt                                                                                                                          <  2:351016/131‑1 (MQ=255)

                     cccGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGt                                                                                                                          >  1:351016/1‑131 (MQ=255)

                      ccGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAg                                                                                                                >  1:1204386/1‑140 (MQ=255)

                         tCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTc                                                                                                             <  2:227237/140‑1 (MQ=255)

                           ggTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCg                                                                                                                           <  2:1787658/124‑1 (MQ=255)

                           ggTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCg                                                                                                                           >  1:1787658/1‑124 (MQ=255)

                           ggTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTg                                                                                                           <  2:932866/140‑1 (MQ=255)

                             ttGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTggg                                                                                                         >  1:254556/1‑140 (MQ=255)

                             ttGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTggg                                                                                                         >  2:116972/1‑140 (MQ=255)

                              tGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTgggg                                                                                                        <  2:25067/140‑1 (MQ=255)

                              tGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTgggg                                                                                                        <  2:1500152/140‑1 (MQ=255)

                                    ttACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATc                                                                                                  >  1:1196206/1‑140 (MQ=255)

                                      aCTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTg                                                                                                >  2:846783/1‑140 (MQ=255)

                                       cTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTgg                                                                                               >  2:1462413/1‑140 (MQ=255)

                                        ttAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGa                                                                                              <  1:1713130/140‑1 (MQ=255)

                                          aaTTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATa                                                                                            >  2:1099678/1‑140 (MQ=255)

                                           aTTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAatat                                                                                                   <  2:173/132‑1 (MQ=255)

                                           aTTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAatat                                                                                                   >  1:173/1‑132 (MQ=255)

                                           aTTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAatat                                                                                                   >  1:171619/1‑132 (MQ=255)

                                               gAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCa                                                                                       >  1:1224928/1‑140 (MQ=255)

                                                aaTATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCaa                                                                                      >  2:1567812/1‑140 (MQ=255)

                                                 atatCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAAc                                                                                     >  2:1344325/1‑140 (MQ=255)

                                                      gACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAat                                                                                >  1:1753374/1‑140 (MQ=255)

                                                          ttATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAatcatc                                                                            >  2:1605993/1‑140 (MQ=255)

                                                                   ttAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTc                                                                       <  2:737018/136‑1 (MQ=255)

                                                                   ttAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTc                                                                       >  1:737018/1‑136 (MQ=255)

                                                                    tAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGc                                                                  >  2:1732663/1‑140 (MQ=255)

                                                                     aGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGcc                                                                 >  2:375792/1‑140 (MQ=255)

                                                                       ttttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCg                                                               <  2:428197/140‑1 (MQ=255)

                                                                       ttttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCg                                                               <  2:88837/140‑1 (MQ=255)

                                                                        tttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGa                                                              <  2:1823818/140‑1 (MQ=255)

                                                                        tttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGa                                                              <  1:1074626/140‑1 (MQ=255)

                                                                        tttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGa                                                              <  1:1114988/140‑1 (MQ=255)

                                                                         ttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGTCCGaa                                                             <  2:1196206/140‑1 (MQ=255)

                                                                         ttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGaa                                                             <  1:1344325/140‑1 (MQ=255)

                                                                         ttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGaa                                                             <  1:1605993/140‑1 (MQ=255)

                                                                         ttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGaa                                                             <  2:1204386/140‑1 (MQ=255)

                                                                         ttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGaa                                                             <  2:1736902/140‑1 (MQ=255)

                                                                         ttgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGaa                                                             >  1:603696/1‑140 (MQ=255)

                                                                          tgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAatcatc                                                                            <  2:1822901/124‑1 (MQ=255)

                                                                          tgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAatcatc                                                                            >  1:1822901/1‑124 (MQ=255)

                                                                          tgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAag                                                            <  1:846783/140‑1 (MQ=255)

                                                                          tgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAag                                                            >  2:1743837/1‑140 (MQ=255)

                                                                          tgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAag                                                            <  1:1788988/140‑1 (MQ=255)

                                                                          tgttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAag                                                            <  1:214460/140‑1 (MQ=255)

                                                                           gttttTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAaga                                                           >  1:1252841/1‑140 (MQ=255)

                                                                            tttttACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAagag                                                          <  2:603696/140‑1 (MQ=255)

                                                                              tttACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGt                                                        <  2:1586204/140‑1 (MQ=255)

                                                                                 aCGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAg                                                     >  2:1785368/1‑140 (MQ=255)

                                                                                 aCGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAg                                                     >  2:1254449/1‑140 (MQ=255)

                                                                                      cgtcgtTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCa                                                >  1:711198/1‑140 (MQ=255)

                                                                                      cgtcgtTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCa                                                >  2:211303/1‑140 (MQ=255)

                                                                                      cgtcgtTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCGGGCCCGAAAAGGTAAGTATCa                                                <  2:1363687/140‑1 (MQ=255)

                                                                                          gtTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAgcgc                                            <  1:1375711/140‑1 (MQ=255)

                                                                                          gtTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAgcgc                                            >  1:770611/1‑140 (MQ=255)

                                                                                           tttCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGcc                                           <  2:1297323/140‑1 (MQ=255)

                                                                                           tttCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGcc                                           <  2:811826/140‑1 (MQ=255)

                                                                                           tttCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGcc                                           <  1:927525/140‑1 (MQ=255)

                                                                                           tttCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGcc                                           <  2:1346837/140‑1 (MQ=255)

                                                                                                ggTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCAt                                      >  1:390325/1‑140 (MQ=255)

                                                                                                ggTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCCGGCCCGAAGAGGTAAGTATCAGCGCCTTCAt                                      <  1:1636990/140‑1 (MQ=255)

                                                                                                 gTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCAtt                                     <  1:1099678/140‑1 (MQ=255)

                                                                                                  tttGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTa                                    <  2:1163269/140‑1 (MQ=255)

                                                                                                   ttGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTag                                   >  2:1222777/1‑140 (MQ=255)

                                                                                                   ttGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTag                                   >  2:514158/1‑140 (MQ=255)

                                                                                                   ttGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGAATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTag                                   >  2:1324927/1‑140 (MQ=255)

                                                                                                    tGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTaga                                  >  1:586509/1‑140 (MQ=255)

                                                                                                    tGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTaga                                  >  2:869122/1‑140 (MQ=255)

                                                                                                    tGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTaga                                  >  1:268283/1‑140 (MQ=255)

                                                                                                    tGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTaga                                  >  1:220198/1‑140 (MQ=255)

                                                                                                      cAACACTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAgaga                                <  2:711198/140‑1 (MQ=255)

                                                                                                        acacTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATa                              <  1:1384238/140‑1 (MQ=255)

                                                                                                        acacTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATa                              <  2:1458361/140‑1 (MQ=255)

                                                                                                        acacTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATa                              <  1:1765934/140‑1 (MQ=255)

                                                                                                        acacTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATa                              <  2:1616362/140‑1 (MQ=255)

                                                                                                         cacTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATAc                             <  2:390325/140‑1 (MQ=255)

                                                                                                          acTCGCAGCTCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACt                            <  1:150437/140‑1 (MQ=255)

                                                                                                                   tCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCAc                   >  2:368811/1‑140 (MQ=255)

                                                                                                                   tCATATTTGCCAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCAc                   >  1:1596105/1‑140 (MQ=255)

                                                                                                                            ccAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGAcc          >  1:1616860/1‑140 (MQ=255)

                                                                                                                            ccAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGAcc          >  2:1529241/1‑140 (MQ=255)

                                                                                                                            ccAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGAcc          >  1:578326/1‑140 (MQ=255)

                                                                                                                            ccAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGAcc          >  1:1250704/1‑140 (MQ=255)

                                                                                                                            ccAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGAcc          >  2:1795528/1‑140 (MQ=255)

                                                                                                                             cAGAAGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGACCt         >  1:1638342/1‑140 (MQ=255)

                                                                                                                                aaGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGACCtttt      >  2:1669710/1‑140 (MQ=255)

                                                                                                                                aaGCAGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGACCtttt      <  2:1252841/140‑1 (MQ=255)

                                                                                                                                    aGGGGGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGACCTTTTTTgg  <  2:220198/140‑1 (MQ=255)

ACGTTTATGACGGGGAGAGTCCCCGTCGGTTGACATTTACTTAATTTGAATATCGACGTTATATTTTTTAGTTTTGTTTTTACGGGCGTCGTTTCGGGTTTGCAACACTCGCAGCTCATATTTGCCAGAAGCAGGGAGTGAGTATTGTCCGTGACTATCGAGTTCTGGGGAATATCTGGATAAATCAACTGAATCATCGATTCCTGGCCCGAAGAGGTAAGTATCAGCGCCTTCATTAGAGATACTCACATGCACTTTCTGACCTTTTTTGG  >  NC_000913/1227035‑1227306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`