BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,349,578	G→T	intergenic (‑106/‑109)	inaA ← / → yfaH	putative lipopolysaccharide kinase InaA/putative uncharacterized protein YfaH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,349,578	0	G	T	100.0%	369.5 / NA	107	intergenic (‑106/‑109)	inaA/yfaH	putative lipopolysaccharide kinase InaA/putative uncharacterized protein YfaH
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (48/59); total (48/59)

Only 100 of 107 total aligned reads displayed.

TAAATTCGTCGTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTAGCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGACA  >  NC_000913/2349442‑2349703

tAAATTCGTCGTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAATCGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCtt                                                                                                                            <  2:1161823/140‑1 (MQ=255)

   aTTCGTCGTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGac                                                                                                                         >  1:71265/1‑140 (MQ=255)

   aTTCGTCGTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGac                                                                                                                         >  2:340228/1‑140 (MQ=255)

    ttCGTCGTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGaca                                                                                                                        <  1:715751/140‑1 (MQ=255)

     tcgtcgTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGacac                                                                                                                       <  1:1719901/140‑1 (MQ=255)

      cgtcgtACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACAcc                                                                                                                      >  1:6986/1‑140 (MQ=255)

       gtcgtACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCg                                                                                                                     <  2:1554449/140‑1 (MQ=255)

        tcgtACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGc                                                                                                                    >  1:365289/1‑140 (MQ=255)

          gtACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCtt                                                                                                                  <  2:762872/140‑1 (MQ=255)

              tttGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTAc                                                                                                              <  2:346424/140‑1 (MQ=255)

              tttGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTAc                                                                                                              <  1:340228/140‑1 (MQ=255)

                              tACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCCTCATTTGCAgcgc                                                                                              <  1:1757822/140‑1 (MQ=255)

                               aCCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCa                                                                                             <  2:1672431/140‑1 (MQ=255)

                               aCCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCa                                                                                             <  2:1379302/140‑1 (MQ=255)

                                 ccTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATa                                                                                           >  1:1506249/1‑140 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCa                                                                                                  >  2:1104641/1‑129 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCa                                                                                                  <  1:1104641/129‑1 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGAtt                                                                                       >  2:1425609/1‑140 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGAtt                                                                                       >  2:718381/1‑140 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGAtt                                                                                       >  2:522156/1‑140 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGAtt                                                                                       >  1:1249339/1‑140 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGAtt                                                                                       >  1:1158991/1‑140 (MQ=255)

                                     tCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGAtt                                                                                       >  1:741803/1‑140 (MQ=255)

                                         cTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTCCCCTTCATTTGCAGCGCATAGATTccac                                                                                   <  2:1662507/140‑1 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacc                                                                                  >  1:234548/1‑140 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacc                                                                                  >  1:343961/1‑140 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacc                                                                                  >  1:1707612/1‑140 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacc                                                                                  >  2:822974/1‑140 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacc                                                                                  >  2:24852/1‑140 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccac                                                                                   >  2:1707110/1‑139 (MQ=255)

                                          tGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccac                                                                                   <  1:1707110/139‑1 (MQ=255)

                                           gTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacca                                                                                 <  2:1679485/140‑1 (MQ=255)

                                           gTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacca                                                                                 >  2:1286065/1‑140 (MQ=255)

                                           gTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTccacca                                                                                 >  2:201746/1‑140 (MQ=255)

                                           gTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTACATTTGCAGCGCATAGATTccacca                                                                                 >  2:531167/1‑140 (MQ=255)

                                             cATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGc                                                                               <  2:234548/140‑1 (MQ=255)

                                             cATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGc                                                                               <  1:1486260/140‑1 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             <  2:255532/140‑1 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             <  2:6986/140‑1 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             <  1:834105/140‑1 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             <  2:1399484/140‑1 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             <  1:856479/140‑1 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             >  1:1472162/1‑140 (MQ=255)

                                               tttttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGcca                                                                             <  1:718381/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTCCCCTTCATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  2:763910/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  1:522156/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  1:241824/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  1:43917/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  2:333177/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  2:365289/140‑1 (MQ=255)

                                                 tttATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTACATTTGCAGCGCATAGATTCCACCAGccact                                                                           <  1:531167/140‑1 (MQ=255)

                                                   tattaACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccactac                                                                         <  1:1225934/140‑1 (MQ=255)

                                                   tattaACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccactac                                                                         <  2:1249339/140‑1 (MQ=255)

                                                   tattaACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccactac                                                                         <  2:169156/140‑1 (MQ=255)

                                                   tattaACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccactac                                                                         <  1:519787/140‑1 (MQ=255)

                                                        aCGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccactac                                                                         >  2:466616/1‑135 (MQ=255)

                                                        aCGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGccactac                                                                         <  1:466616/135‑1 (MQ=255)

                                                             aaTGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGt                                                               >  1:816840/1‑140 (MQ=255)

                                                                  cTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGcc                                                          >  2:1821458/1‑140 (MQ=255)

                                                                   tataGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACCCCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGccc                                                         <  2:1468911/140‑1 (MQ=255)

                                                                   tataGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGccc                                                         <  1:1017284/140‑1 (MQ=255)

                                                                     taGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCCCCAGCCACTACCACTAATAGTGCGCCcag                                                       <  2:328959/140‑1 (MQ=255)

                                                                     taGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCcag                                                       <  1:968370/140‑1 (MQ=255)

                                                                     taGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCcag                                                       >  2:1474727/1‑140 (MQ=255)

                                                                      aGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCcagc                                                      >  1:106505/1‑140 (MQ=255)

                                                                        gtggtTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCcagcag                                                    >  2:1654446/1‑140 (MQ=255)

                                                                           gtTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATa                                                 >  2:72569/1‑140 (MQ=255)

                                                                           gtTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATa                                                 >  2:376333/1‑140 (MQ=255)

                                                                           gtTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATa                                                 >  2:1057563/1‑140 (MQ=255)

                                                                             tACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATaaa                                               >  1:433452/1‑140 (MQ=255)

                                                                               ccTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAAt                                             >  2:1655423/1‑140 (MQ=255)

                                                                                cTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAAtg                                            <  1:1821458/140‑1 (MQ=255)

                                                                                cTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAAtg                                            <  2:1707612/140‑1 (MQ=255)

                                                                                  gAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAAtgtg                                          >  1:982899/1‑140 (MQ=255)

                                                                                  gAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAAtgtg                                          >  1:1695803/1‑140 (MQ=255)

                                                                                  gAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAAtgtg                                          >  2:768648/1‑140 (MQ=255)

                                                                                   aGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGa                                         >  1:1616814/1‑140 (MQ=255)

                                                                                   aGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGa                                         >  1:470208/1‑140 (MQ=255)

                                                                                          tCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAAt                                  <  2:1472162/140‑1 (MQ=255)

                                                                                          tCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAAt                                  <  1:1286065/140‑1 (MQ=255)

                                                                                          tCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAAt                                  <  2:1645990/140‑1 (MQ=255)

                                                                                             tAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAAt                                  >  2:651308/1‑137 (MQ=255)

                                                                                             tAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAAt                                  <  1:651308/137‑1 (MQ=255)

                                                                                               aTGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGc                             <  2:1506249/140‑1 (MQ=255)

                                                                                               aTGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGc                             <  2:106505/140‑1 (MQ=255)

                                                                                               aTGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGc                             <  2:1616814/140‑1 (MQ=255)

                                                                                                    aCGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATa                        <  2:1158991/140‑1 (MQ=255)

                                                                                                    aCGTGTCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATa                        >  1:937821/1‑140 (MQ=255)

                                                                                                      gtgtCGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACa                      <  1:1057563/140‑1 (MQ=255)

                                                                                                          cGTATTAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGa                  <  2:741803/140‑1 (MQ=255)

                                                                                                              ttAATGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGaa              >  1:370524/1‑140 (MQ=255)

                                                                                                                 aTGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAAttt           >  2:641595/1‑140 (MQ=255)

                                                                                                                 aTGAATTTCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAAttt           >  1:196348/1‑140 (MQ=255)

                                                                                                                      tttCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTc      >  1:1569276/1‑140 (MQ=255)

                                                                                                                        tCTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGa    <  1:768648/140‑1 (MQ=255)

                                                                                                                         cTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAGTCAGGCGGATACAGCGATGAATTTTATTCGAc   <  2:343961/140‑1 (MQ=255)

                                                                                                                         cTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGAc   <  2:101874/140‑1 (MQ=255)

                                                                                                                         cTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGAc   <  1:1167917/140‑1 (MQ=255)

                                                                                                                         cTTTTGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGAc   <  2:937821/140‑1 (MQ=255)

                                                                                                                          ttttGCCACTACTATCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCCCCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGACa  <  1:72569/140‑1 (MQ=255)

TAAATTCGTCGTACTTTGCTGAAACTGCCATACCCTATCGCCTGTCATTTTTATTAACGACAATGACTATAGGTGGTTACCTGAGGAAAATCTTAATGAAACGTGTCGTATTAATGAATTTCTTTTGCCACTACTAGCTTGACACCGCTTTTACCCTTCATTTGCAGCGCATAGATTCCACCAGCCACTACCACTAATAGTGCGCCCAGCAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGACA  >  NC_000913/2349442‑2349703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`