Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	116,614	T→C	G162G (GGA→GGG)	hofB ←	T2SSE family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	116,614	0	T	C	100.0%	367.8 / NA	100	G162G (GGA→GGG)	hofB	T2SSE family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (57/43);  total (57/43)

CAAAGTCCGCCAGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTTCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATGCAATACG  >  NC_000913/116478‑116749                                                                                                                                         |                                                                                                                                        cAAAGTCCGCCAGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCt                                                                                                                                      >  2:1110687/1‑140 (MQ=255)           cAGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGa                                                                                                                            <  2:346980/140‑1 (MQ=255)            aGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGAc                                                                                                                           <  1:1110687/140‑1 (MQ=255)            aGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGAc                                                                                                                           <  2:995825/140‑1 (MQ=255)            aGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGAc                                                                                                                           <  2:972056/140‑1 (MQ=255)            aGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGAc                                                                                                                           <  1:744994/140‑1 (MQ=255)                      gCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGc                                                                                                                 <  1:1726547/140‑1 (MQ=255)                       cTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGcc                                                                                                                <  1:1505203/140‑1 (MQ=255)                        tGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGccc                                                                                                               >  1:697381/1‑140 (MQ=255)                                 aGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCgg                                                                                                      >  1:666025/1‑140 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                <  1:624314/140‑1 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                <  1:1513275/140‑1 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                >  2:1326065/1‑140 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                >  1:1572632/1‑140 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                >  2:518317/1‑140 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                >  1:1732175/1‑140 (MQ=255)                                       ttGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAACACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCg                                                                                                >  1:35135/1‑140 (MQ=255)                                            aTCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGtt                                                                                           <  1:499817/140‑1 (MQ=255)                                               cAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCg                                                                                        <  2:800881/140‑1 (MQ=255)                                               cAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCg                                                                                        <  1:931135/140‑1 (MQ=255)                                               cAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCg                                                                                        <  2:1773120/140‑1 (MQ=255)                                                aGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGc                                                                                       >  1:425211/1‑140 (MQ=255)                                                aGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGc                                                                                       >  1:881705/1‑140 (MQ=255)                                                aGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGc                                                                                       >  1:1612642/1‑140 (MQ=255)                                                  tGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCg                                                                                        <  1:1526857/137‑1 (MQ=255)                                                  tGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCg                                                                                        >  2:1526857/1‑137 (MQ=255)                                                    ccTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAata                                                                                   >  2:1318563/1‑140 (MQ=255)                                                    ccTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAata                                                                                   >  1:1544205/1‑140 (MQ=255)                                                    ccTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCACTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAata                                                                                   >  2:1336064/1‑140 (MQ=255)                                                        aCCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCa                                                                               >  2:370544/1‑140 (MQ=255)                                                          ccACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAgg                                                                             <  1:866287/140‑1 (MQ=255)                                                            aCCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGtt                                                                           >  1:34618/1‑140 (MQ=255)                                                              ctgctgTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTc                                                                         >  1:455611/1‑140 (MQ=255)                                                                 ctgTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCa                                                                      <  1:1618148/140‑1 (MQ=255)                                                                 ctgTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCa                                                                      <  2:455611/140‑1 (MQ=255)                                                                  tgTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAg                                                                     <  2:42346/140‑1 (MQ=255)                                                                  tgTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAg                                                                     <  2:697381/140‑1 (MQ=255)                                                                          ccTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTa                                                             >  2:1201172/1‑140 (MQ=255)                                                                           cTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTaa                                                            >  1:414925/1‑140 (MQ=255)                                                                           cTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTaa                                                            >  1:1428224/1‑140 (MQ=255)                                                                            ttAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAAt                                                           >  1:1145141/1‑140 (MQ=255)                                                                              aaTACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAg                                                                     <  1:581946/128‑1 (MQ=255)                                                                              aaTACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAg                                                                     >  2:581946/1‑128 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:1200221/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  2:382042/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  2:422053/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:1106365/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:709253/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:1770028/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:703978/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:259040/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:519773/1‑140 (MQ=255)                                                                                     ccTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGtt                                                  >  1:1784353/1‑140 (MQ=255)                                                                                         ttCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATg                                              >  2:611312/1‑140 (MQ=255)                                                                                          tCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGc                                             >  2:708401/1‑140 (MQ=255)                                                                                           caccacCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCg                                            >  1:40125/1‑140 (MQ=255)                                                                                               accCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTc                                        <  2:259040/140‑1 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGTCAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  2:1704800/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  2:311990/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  2:183149/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  1:254354/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  2:368633/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  1:368753/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  1:393795/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  2:1137544/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  1:654712/1‑140 (MQ=255)                                                                                                ccccGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTcc                                       >  2:890681/1‑140 (MQ=255)                                                                                                   cGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGc                                    <  2:368753/140‑1 (MQ=255)                                                                                                   cGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGc                                    <  1:890681/140‑1 (MQ=255)                                                                                                   cGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGc                                    <  2:425211/140‑1 (MQ=255)                                                                                                   cGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGATTAATGCGACTCCGGc                                    <  2:1612642/140‑1 (MQ=255)                                                                                                    gACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCa                                   <  1:1137544/140‑1 (MQ=255)                                                                                                           tAAGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTg                            <  1:311990/140‑1 (MQ=255)                                                                                                            aaGGTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGa                           >  2:200998/1‑140 (MQ=255)                                                                                                               gTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAAc                        <  1:370544/140‑1 (MQ=255)                                                                                                               gTCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAAc                        >  2:297236/1‑140 (MQ=255)                                                                                                                tCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACa                       >  2:168051/1‑140 (MQ=255)                                                                                                                tCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACa                       <  2:1544205/140‑1 (MQ=255)                                                                                                                tCGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACa                       <  1:681284/140‑1 (MQ=255)                                                                                                                 cGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACAt                      <  2:35135/140‑1 (MQ=255)                                                                                                                 cGCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACAt                      <  1:1318563/140‑1 (MQ=255)                                                                                                                  gCAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATc                     <  2:34618/140‑1 (MQ=255)                                                                                                                   cAATACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATcc                    >  1:1619645/1‑140 (MQ=255)                                                                                                                     aTACGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCgg                  >  1:1490320/1‑140 (MQ=255)                                                                                                                       aCGAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTa                <  2:1164133/140‑1 (MQ=255)                                                                                                                         gAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTaaa              <  2:285129/140‑1 (MQ=255)                                                                                                                         gAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTaaa              <  2:1732175/140‑1 (MQ=255)                                                                                                                         gAAATGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTaaa              >  1:81418/1‑140 (MQ=255)                                                                                                                          aaaTGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAg             <  2:905571/140‑1 (MQ=255)                                                                                                                           aaTGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAgg            <  2:40125/140‑1 (MQ=255)                                                                                                                             tGAGACGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGAt          <  1:1201172/140‑1 (MQ=255)                                                                                                                              gagaCGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATg         >  1:1330355/1‑140 (MQ=255)                                                                                                                                gaCGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGt                 <  1:161139/130‑1 (MQ=255)                                                                                                                                gaCGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGt                 >  2:161139/1‑130 (MQ=255)                                                                                                                                 aCGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATGCaa      >  1:860083/1‑140 (MQ=255)                                                                                                                                  cGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACAt                      >  2:663776/1‑123 (MQ=255)                                                                                                                                  cGGCGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACAt                      <  1:663776/123‑1 (MQ=255)                                                                                                                                     cGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATGCAATACg  >  1:1702844/1‑140 (MQ=255)                                                                                                                                     cGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATGCAATACg  <  1:1819409/140‑1 (MQ=255)                                                                                                                                     cGTTCCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATGCAATACg  <  1:1326065/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        CAAAGTCCGCCAGTTGTAACGGCTGCATTCCAAGCGTGTTGACATCCAGTGCCTGACCCACCTGCTGTAACAACCTTAATACCACCTTTTCACCACCCCGACATGGTAAGGTCGCAATACGAAATGAGACGGCGTTTCCTGCCAGTTCGACAGTGAATTGCCCGTCCTGCGGCAGGCGATGTTCCGCAATATCCAGGTTTCCCAGCACTTTTAATCTGGCGGTTAATGCGACTCCGGCATCCGGTGAAACATCCGGTAAAGGATGCAATACG  >  NC_000913/116478‑116749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑