BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,904,529	G→A	intergenic (+1155/+218)	ygcE → / ← queE	putative sugar kinase YgcE/putative 7‑carboxy‑7‑deazaguanine synthase QueE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,904,529	0	G	A	100.0%	490.0 / NA	134	intergenic (+1155/+218)	ygcE/queE	putative sugar kinase YgcE/putative 7‑carboxy‑7‑deazaguanine synthase QueE
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (85/49); total (85/49)

Only 100 of 136 total aligned reads displayed.

TGGCGCGGGGAACACTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAGGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAG  >  NC_000913/2904393‑2904664

tGGCGCGGGGAACACTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTa                                                                                                                                      <  1:62020/140‑1 (MQ=255)

 ggCGCGGGGAACACTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTaa                                                                                                                                     <  1:1644237/140‑1 (MQ=255)

    gcgGGGAACACTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAata                                                                                                                                  <  1:952568/140‑1 (MQ=255)

           acacTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTaaaa                                                                                                                           <  1:897352/140‑1 (MQ=255)

           acacTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTaaaa                                                                                                                           <  1:897217/140‑1 (MQ=255)

           acacTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTaaaa                                                                                                                           <  1:743878/140‑1 (MQ=255)

           acacTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTaaaa                                                                                                                           <  2:1417754/140‑1 (MQ=255)

           acacTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTaaaa                                                                                                                           <  2:678546/140‑1 (MQ=255)

            cacTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAAt                                                                                                                          >  2:24565/1‑140 (MQ=255)

                    aCATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCtat                                                                                                                  >  1:1346653/1‑140 (MQ=255)

                        aaCCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAAct                                                                                                                      <  2:1632607/132‑1 (MQ=255)

                        aaCCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACaa                                                                                                              >  1:1022509/1‑140 (MQ=255)

                         aCCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACaaa                                                                                                             >  2:842903/1‑140 (MQ=255)

                         aCCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACaaa                                                                                                             >  1:498130/1‑140 (MQ=255)

                         aCCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACaaa                                                                                                             >  1:1458179/1‑140 (MQ=255)

                           cTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACt                                                                                                           >  2:1545186/1‑140 (MQ=255)

                             attattAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTaa                                                                                                         >  2:1690471/1‑140 (MQ=255)

                             attattAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTaa                                                                                                         >  1:1654282/1‑140 (MQ=255)

                                attaattaATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAAt                                                                                                      >  1:1746806/1‑140 (MQ=255)

                                    attaatGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTAc                                                                                                  >  2:1366443/1‑140 (MQ=255)

                                    attaatGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTAc                                                                                                  >  2:103576/1‑140 (MQ=255)

                                    attaatGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTAc                                                                                                  >  1:731556/1‑140 (MQ=255)

                                     ttaatGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTAcc                                                                                                 >  2:846137/1‑140 (MQ=255)

                                        atGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCaaa                                                                                              >  2:1195536/1‑140 (MQ=255)

                                        atGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCaaa                                                                                              >  1:243855/1‑140 (MQ=255)

                                               tttAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTAcc                                                                                       >  2:848457/1‑140 (MQ=255)

                                                  aaGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCa                                                                                    <  1:1545186/140‑1 (MQ=255)

                                                    gCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCaat                                                                                  <  1:842903/140‑1 (MQ=255)

                                                     ccAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCaata                                                                                 <  2:498130/140‑1 (MQ=255)

                                                             aaTCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCAc                                                                         >  2:932819/1‑140 (MQ=255)

                                                              aTCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACt                                                                        >  1:1114121/1‑140 (MQ=255)

                                                               tCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTc                                                                       <  1:705356/140‑1 (MQ=255)

                                                                  aCCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAg                                                                    >  1:718948/1‑140 (MQ=255)

                                                                  aCCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAg                                                                    >  2:1607319/1‑140 (MQ=255)

                                                                  aCCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAg                                                                    >  2:473073/1‑140 (MQ=255)

                                                                  aCCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAg                                                                    >  1:1008612/1‑140 (MQ=255)

                                                                   ccAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGc                                                                   >  2:1755851/1‑140 (MQ=255)

                                                                   ccAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGc                                                                   >  1:71313/1‑140 (MQ=255)

                                                                     aaCTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGa                                                                 <  2:718948/140‑1 (MQ=255)

                                                                        tttATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGaaaa                                                              >  1:816289/1‑140 (MQ=255)

                                                                         ttATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGaaaaa                                                             >  1:1236123/1‑140 (MQ=255)

                                                                           ataGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAAtt                                                           >  2:1280971/1‑140 (MQ=255)

                                                                           ataGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAAtt                                                           >  1:945560/1‑140 (MQ=255)

                                                                             aGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTaa                                                         <  1:1211122/140‑1 (MQ=255)

                                                                              gTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAAt                                                        <  1:473073/140‑1 (MQ=255)

                                                                               tATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATg                                                       >  2:1828/1‑140 (MQ=255)

                                                                                 tCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGcc                                                     >  2:871142/1‑140 (MQ=255)

                                                                                 tCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGcc                                                     >  1:124885/1‑140 (MQ=255)

                                                                                 tCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGcc                                                     >  1:1340712/1‑140 (MQ=255)

                                                                                  cacacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCGTTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCca                                                    >  1:388689/1‑140 (MQ=255)

                                                                                  cacacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCca                                                    >  2:1095262/1‑140 (MQ=255)

                                                                                   acacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCGTTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcac                                                   <  2:388689/140‑1 (MQ=255)

                                                                                   acacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcac                                                   <  1:1607319/140‑1 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcaca                                                  >  2:739699/1‑140 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcaca                                                  >  2:947273/1‑140 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcaca                                                  >  1:544765/1‑140 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcaca                                                  >  1:593064/1‑140 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcaca                                                  >  1:658707/1‑140 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcac                                                   >  2:459051/1‑139 (MQ=255)

                                                                                    cacaAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCcac                                                   <  1:459051/139‑1 (MQ=255)

                                                                                     acaaacaaCACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAg                                                 <  1:1293540/140‑1 (MQ=255)

                                                                                         acaacaCATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAAtt                                             >  1:1485054/1‑140 (MQ=255)

                                                                                             cacaTCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTa                                         >  2:238471/1‑140 (MQ=255)

                                                                                              acaTCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTag                                        >  1:1784667/1‑140 (MQ=255)

                                                                                               caTCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTaga                                       >  1:580907/1‑140 (MQ=255)

                                                                                               caTCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTaga                                       <  1:848457/140‑1 (MQ=255)

                                                                                                     ttATGTTAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGc                                 >  2:1210611/1‑140 (MQ=255)

                                                                                                          ttAAAGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATg                            >  1:1074112/1‑140 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  1:1366443/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  1:103576/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  2:1784667/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  2:1746806/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  1:947273/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  1:238471/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  2:124885/140‑1 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          >  1:533122/1‑140 (MQ=255)

                                                                                                            aaaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  2:1346653/140‑1 (MQ=255)

                                                                                                             aaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTa                               <  2:1456087/134‑1 (MQ=255)

                                                                                                             aaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTa                               >  1:1456087/1‑134 (MQ=255)

                                                                                                             aaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAtt                         >  1:1147904/1‑140 (MQ=255)

                                                                                                             aaGAGCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          >  2:1503211/1‑139 (MQ=255)

                                                                                                               gagCACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  1:1621106/137‑1 (MQ=255)

                                                                                                                  cACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGAt                          <  2:727967/134‑1 (MQ=255)

                                                                                                                  cACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGccc                    >  2:1141414/1‑140 (MQ=255)

                                                                                                                  cACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGccc                    >  1:228369/1‑140 (MQ=255)

                                                                                                                  cACTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGccc                    >  2:836725/1‑140 (MQ=255)

                                                                                                                    cTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTg                  >  2:1362857/1‑140 (MQ=255)

                                                                                                                    cTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTg                  >  1:1383155/1‑140 (MQ=255)

                                                                                                                    cTTAATCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTg                  >  1:200476/1‑140 (MQ=255)

                                                                                                                     ttAATCCATTGTTTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTgg                 <  2:492828/140‑1 (MQ=255)

                                                                                                                       aaTCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGAt               <  2:1451373/140‑1 (MQ=255)

                                                                                                                       aaTCCATTGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGAt               <  1:1828/140‑1 (MQ=255)

                                                                                                                              tGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTaaa        >  2:1198970/1‑140 (MQ=255)

                                                                                                                              tGATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTaaa        >  2:445836/1‑140 (MQ=255)

                                                                                                                               gATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTaaaa       >  2:679373/1‑140 (MQ=255)

                                                                                                                               gATTAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTaaaa       >  2:750515/1‑140 (MQ=255)

                                                                                                                                  tAAAAAAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGA‑TAGCCCTGGATGGGTAAAATgga   <  1:664214/140‑1 (MQ=255)

                                                                                                                                   aaaaaaGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATgga   >  1:1665552/1‑140 (MQ=255)

                                                                                                                                    aaaaAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATggag  <  1:1707000/140‑1 (MQ=255)

                                                                                                                                    aaaaAGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATggag  <  1:741777/140‑1 (MQ=255)

TGGCGCGGGGAACACTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTGATTAAAAAGGTAAATATTTAAAATAACTCTATACAAACTAAAATCTACCAAACTTTACCGCAATAATTTTCACTCCAGCGAAAAATTAATGCCACAGAATTTGTAGAGAATGCTAATGATTAGCCCTGGATGGGTAAAATGGAG  >  NC_000913/2904393‑2904664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`