BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,412,153	A→G	P167P (CCA→CCG)	yhdJ →	DNA adenine methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,412,153	0	A	G	100.0%	410.7 / NA	113	P167P (CCA→CCG)	yhdJ	DNA adenine methyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (61/52); total (61/52)

Only 100 of 115 total aligned reads displayed.

TCCATGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCACAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGCCTCTTCC  >  NC_000913/3412025‑3412288

accATGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACaa                                                                                                                              <  2:1169458/139‑1 (MQ=255)

   aTGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAatca                                                                                                                           <  1:1607380/140‑1 (MQ=255)

    tGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAatcat                                                                                                                          >  2:560443/1‑140 (MQ=255)

       aCGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCaa                                                                                                                       <  1:641728/140‑1 (MQ=255)

        cGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCaaa                                                                                                                      <  1:1202689/140‑1 (MQ=255)

           aCCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAg                                                                                                                   >  1:1248069/1‑140 (MQ=255)

            cccATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGt                                                                                                                  <  1:1693785/140‑1 (MQ=255)

            cccATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGt                                                                                                                  >  1:1295586/1‑140 (MQ=255)

              cATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTAc                                                                                                                <  1:1521241/140‑1 (MQ=255)

                        atgGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGt                                                                                                      <  2:337657/140‑1 (MQ=255)

                          ggTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGttt                                                                                                    >  1:1100719/1‑140 (MQ=255)

                          ggTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGttt                                                                                                    >  1:1748607/1‑140 (MQ=255)

                            tGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTgg                                                                                                  >  1:1805333/1‑140 (MQ=255)

                               aaGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGAt                                                                                               >  1:1375413/1‑140 (MQ=255)

                                  aCGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGAtttt                                                                                            <  2:1295586/140‑1 (MQ=255)

                                   cGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTc                                                                                           >  1:87676/1‑140 (MQ=255)

                                    gCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGAACCGGGTAACGTTTGGGATTTTcc                                                                                          >  1:166715/1‑140 (MQ=255)

                                     cAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCcg                                                                                         >  2:131929/1‑140 (MQ=255)

                                      aaaGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCcgc                                                                                        >  2:871814/1‑140 (MQ=255)

                                        aGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCcgcgc                                                                                      <  2:1805333/140‑1 (MQ=255)

                                          aaCTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCgcgt                                                                                    <  2:1049385/140‑1 (MQ=255)

                                          aaCTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCgcgt                                                                                    <  2:109659/140‑1 (MQ=255)

                                           aCTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCgcgtg                                                                                   >  1:475794/1‑140 (MQ=255)

                                             tACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAGAAGTACCGGGTAACGTTTGGGATTTTCCGCgcgtgcg                                                                                 <  2:1735114/140‑1 (MQ=255)

                                             tACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCgcgtgcg                                                                                 <  2:622605/140‑1 (MQ=255)

                                              acacATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCgcgtgcgt                                                                                >  2:1574684/1‑140 (MQ=255)

                                                    tCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTg                                                                          >  1:1407845/1‑140 (MQ=255)

                                                    tCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTg                                                                          >  1:54893/1‑140 (MQ=255)

                                                    tCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTg                                                                          >  1:1774073/1‑140 (MQ=255)

                                                    tCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTg                                                                          >  1:689056/1‑140 (MQ=255)

                                                     cAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTga                                                                         <  1:560443/140‑1 (MQ=255)

                                                     cAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTga                                                                         >  2:847325/1‑140 (MQ=255)

                                                      aaCGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTCACGTTTGGGATTTTCCGCGCGTGCGTTATTTgat                                                                        <  2:1543627/140‑1 (MQ=255)

                                                         ggTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTgatgga                                                                     <  1:731489/140‑1 (MQ=255)

                                                           tGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTgatggatg                                                                   >  1:906929/1‑140 (MQ=255)

                                                            gATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGa                                                                  >  1:646193/1‑140 (MQ=255)

                                                             aTGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGGTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGaa                                                                 >  1:529505/1‑140 (MQ=255)

                                                             aTGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGC‑AAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAat                                                                >  1:719176/1‑140 (MQ=255)

                                                              tGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAat                                                                >  1:864829/1‑140 (MQ=255)

                                                              tGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAat                                                                >  1:823007/1‑140 (MQ=255)

                                                                cTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAatat                                                              <  2:1100719/140‑1 (MQ=255)

                                                                  aTTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTT‑TTTGATGGATGAATATGaa                                                           >  1:301111/1‑140 (MQ=255)

                                                                   ttCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGaa                                                           <  2:1375413/140‑1 (MQ=255)

                                                                     cTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGaaaa                                                         >  1:1361288/1‑140 (MQ=255)

                                                                        gTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAacca                                                      >  1:852307/1‑140 (MQ=255)

                                                                        gTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAacca                                                      >  2:684561/1‑140 (MQ=255)

                                                                         tAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAaccac                                                     >  1:1568262/1‑140 (MQ=255)

                                                                            aaGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCg                                                  >  2:1352369/1‑140 (MQ=255)

                                                                             aGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTgatggatg                                                                   >  2:1446787/1‑122 (MQ=255)

                                                                             aGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGa                                                 >  2:814425/1‑140 (MQ=255)

                                                                             aGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGa                                                 >  1:503551/1‑140 (MQ=255)

                                                                             aGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGa                                                 >  1:19546/1‑140 (MQ=255)

                                                                             aGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGa                                                 >  2:1254731/1‑140 (MQ=255)

                                                                             aGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGa                                                 >  2:398963/1‑140 (MQ=255)

                                                                              gCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGAc                                                >  1:227956/1‑140 (MQ=255)

                                                                              gCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGAc                                                <  1:236041/140‑1 (MQ=255)

                                                                                  aaaCCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCaa                                            <  1:305476/140‑1 (MQ=255)

                                                                                       ggATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAAcc                                       <  2:19546/140‑1 (MQ=255)

                                                                                       ggATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAAcc                                       <  2:1407845/140‑1 (MQ=255)

                                                                                        gATCGCAGCGTGCGTTGATCGATTATCGC‑AAAATCCTCCTCATCCTTACATTCATCAAAAAGTACCGGGGATCGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATTAATATGAAAACCCCCCGACGCAAAAACCgg                                     <  2:1474859/140‑1 (MQ=255)

                                                                                        gATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTTGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCg                                      >  2:512710/1‑140 (MQ=255)

                                                                                        gATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTGACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCg                                      >  2:306637/1‑140 (MQ=255)

                                                                                          tCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGa                                    <  2:166715/140‑1 (MQ=255)

                                                                                            gCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAg                                  <  2:642989/140‑1 (MQ=255)

                                                                                              aGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCaaa                                           <  1:1682274/129‑1 (MQ=255)

                                                                                              aGCGCGCGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCaaa                                           >  2:1682274/1‑129 (MQ=255)

                                                                                               gcgcgcGTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCt                               <  2:1568262/140‑1 (MQ=255)

                                                                                                  cgcgTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTAc                            >  1:308701/1‑140 (MQ=255)

                                                                                                  cgcgTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGCACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTAc                            >  2:1100702/1‑140 (MQ=255)

                                                                                                   gcgTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACt                           >  2:1281163/1‑140 (MQ=255)

                                                                                                     gTTGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGa                         >  2:1718867/1‑140 (MQ=255)

                                                                                                      ttGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGaa                        <  2:1248069/140‑1 (MQ=255)

                                                                                                      ttGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGaa                        <  1:1078828/140‑1 (MQ=255)

                                                                                                      ttGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGaa                        <  2:1748607/140‑1 (MQ=255)

                                                                                                      ttGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGaa                        <  2:942190/140‑1 (MQ=255)

                                                                                                       tGATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGaaa                       <  1:960161/140‑1 (MQ=255)

                                                                                                        gATCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAAc                      >  1:634788/1‑140 (MQ=255)

                                                                                                          tCGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGc                    >  2:1068107/1‑140 (MQ=255)

                                                                                                           cGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCa                   <  1:1361307/140‑1 (MQ=255)

                                                                                                           cGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCa                   <  1:650978/140‑1 (MQ=255)

                                                                                                           cGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCa                   <  2:612262/140‑1 (MQ=255)

                                                                                                           cGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCa                   <  2:168023/140‑1 (MQ=255)

                                                                                                           cGATTATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCa                   <  1:1718867/140‑1 (MQ=255)

                                                                                                               tATCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGaa                        <  2:720627/131‑1 (MQ=255)

                                                                                                                 tCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCattatt              >  1:1130435/1‑139 (MQ=255)

                                                                                                                 tCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATtc             >  1:706173/1‑140 (MQ=255)

                                                                                                                 tCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATtc             <  1:1399323/140‑1 (MQ=255)

                                                                                                                 tCGCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATtc             >  1:1521556/1‑140 (MQ=255)

                                                                                                                   gCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATtctc           >  2:895642/1‑140 (MQ=255)

                                                                                                                   gCAAAAATCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATtctc           >  1:358835/1‑140 (MQ=255)

                                                                                                                     aaaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAACCCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGc         <  2:519217/140‑1 (MQ=255)

                                                                                                                     aaaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGc         <  1:1293256/140‑1 (MQ=255)

                                                                                                                     aaaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGc         <  1:814425/140‑1 (MQ=255)

                                                                                                                     aaaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGc         <  2:646193/140‑1 (MQ=255)

                                                                                                                     aaaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGc         <  2:1774073/140‑1 (MQ=255)

                                                                                                                      aaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGcc        <  1:1254731/140‑1 (MQ=255)

                                                                                                                      aaaaTCCTCCGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGcc        <  1:1762229/140‑1 (MQ=255)

                                                                                                                      aaaaTCCTCCGCAGCCTGACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGcc        <  1:306637/140‑1 (MQ=255)

                                                                                                                          tcctccGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCGCCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGCCTCtt    <  1:1574684/140‑1 (MQ=255)

                                                                                                                            ctccGCAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGCCTCTTcc  >  1:1235266/1‑140 (MQ=255)

TCCATGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCACAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGCCTCTTCC  >  NC_000913/3412025‑3412288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`