BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,836,193	G→T	intergenic (‑264/‑29)	yicJ ← / → selC	putative xyloside transporter YicJ/tRNA‑Sec

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,836,193	0	G	T	100.0%	493.0 / NA	142	intergenic (‑264/‑29)	yicJ/selC	putative xyloside transporter YicJ/tRNA‑Sec
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (92/50); total (92/50)

Only 100 of 147 total aligned reads displayed.

CGTTAATTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCGCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCAAAATGC  >  NC_000913/3836056‑3836322

 gTTAATTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTccc                                                                                                                                 <  2:1292160/140‑1 (MQ=255)

  ttAATTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTcccc                                                                                                                                >  1:285451/1‑140 (MQ=255)

   tAATTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGAAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCg                                                                                                                               <  2:1458068/140‑1 (MQ=255)

    aaTTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGc                                                                                                                              <  2:1087978/140‑1 (MQ=255)

    aaTTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGc                                                                                                                              <  1:206913/140‑1 (MQ=255)

     aTTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAACCTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGcc                                                                                                                             <  2:192345/140‑1 (MQ=255)

      ttCCGTTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGAAAAAAACTGATCTGGGGGATGTAGAAACCCAAGGAAGTAGCTATAATGCTCCCCGCCt                                                                                                                            <  2:1228547/140‑1 (MQ=255)

        ccGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTcc                                                                                                                          <  1:921017/140‑1 (MQ=255)

          gCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCAt                                                                                                                        >  2:423027/1‑140 (MQ=255)

           cTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGc                                                                                                                              >  1:1422179/1‑133 (MQ=255)

           cTCATATATCATTGTAAAATAAGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATg                                                                                                                       >  2:367091/1‑140 (MQ=255)

                   tCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATc                                                                                                               <  1:407926/140‑1 (MQ=255)

                     aTTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGa                                                                                                             <  2:1795979/140‑1 (MQ=255)

                     aTTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGa                                                                                                             >  1:1821781/1‑140 (MQ=255)

                      ttGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAGTGCTCCCCGCCTCCATGTAGCAATCGAg                                                                                                            <  2:1074421/140‑1 (MQ=255)

                      ttGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAg                                                                                                            >  2:666239/1‑140 (MQ=255)

                        gTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGgc                                                                                                          >  1:413319/1‑140 (MQ=255)

                        gTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGgc                                                                                                          >  1:1044633/1‑140 (MQ=255)

                        gTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGgc                                                                                                          >  1:1408263/1‑140 (MQ=255)

                        gTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGgc                                                                                                          >  1:1273231/1‑140 (MQ=255)

                         tAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGgcg                                                                                                         >  2:1437871/1‑140 (MQ=255)

                          aaaaTATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGgcgc                                                                                                        >  1:630748/1‑140 (MQ=255)

                           aaaTATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGcgcg                                                                                                       <  2:1184262/140‑1 (MQ=255)

                           aaaTATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGcgcg                                                                                                       <  2:34437/140‑1 (MQ=255)

                                tGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGa                                                                                                  >  2:895041/1‑140 (MQ=255)

                                   gTTTTATATGAACTATAATGCTATCGTGATAATACGCTGCGTGTACTAGGCGTAAAAAACTGTTCTGGGGGATGTAGAAACTCAAGGAAGTAGATATATTGCTTCCCGCCTCCATGTAGAAATCGCGTCGCGGAAGAtcg                                                                                               >  2:1510897/1‑140 (MQ=255)

                                    ttttATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGAtcgt                                                                                              <  2:1044633/140‑1 (MQ=255)

                                      ttATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGAtcgtcg                                                                                            >  1:742731/1‑140 (MQ=255)

                                       tataTGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATcgtcgt                                                                                           <  2:1408263/140‑1 (MQ=255)

                                            gAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCg                                                                                      >  1:1580469/1‑140 (MQ=255)

                                             aaCTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCgg                                                                                     >  2:18511/1‑140 (MQ=255)

                                              aCTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGt                                                                                    >  1:1224905/1‑140 (MQ=255)

                                                  taATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAgg                                                                                >  2:1568192/1‑140 (MQ=255)

                                                  taATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAgg                                                                                >  2:780077/1‑140 (MQ=255)

                                                       cTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCt                                                                           >  1:598427/1‑140 (MQ=255)

                                                        tttCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTg                                                                          <  2:1224905/140‑1 (MQ=255)

                                                         ttCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTgg                                                                         <  1:1706579/140‑1 (MQ=255)

                                                         ttCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTgg                                                                         <  2:515416/140‑1 (MQ=255)

                                                          tCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGa                                                                        >  1:734449/1‑140 (MQ=255)

                                                          tCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGa                                                                        >  2:176664/1‑140 (MQ=255)

                                                          tCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGa                                                                        >  1:165098/1‑140 (MQ=255)

                                                          tCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGa                                                                        >  1:1319355/1‑140 (MQ=255)

                                                          tCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGa                                                                        >  1:1818935/1‑140 (MQ=255)

                                                          tCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGa                                                                        >  2:1175740/1‑140 (MQ=255)

                                                            gTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACt                                                                      >  1:1062641/1‑140 (MQ=255)

                                                            gTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACt                                                                      >  1:1750208/1‑140 (MQ=255)

                                                            gTGATAATACGCTGCGAGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACt                                                                      >  2:1614260/1‑140 (MQ=255)

                                                                 aataCGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCaaa                                                                 >  1:696996/1‑140 (MQ=255)

                                                                 aataCGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCaaa                                                                 <  2:734449/140‑1 (MQ=255)

                                                                  ataCGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAt                                                                <  1:204166/140‑1 (MQ=255)

                                                                  ataCGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAt                                                                <  2:413319/140‑1 (MQ=255)

                                                                   taCGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑c                                                              >  1:78070/1‑140 (MQ=255)

                                                                     cGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCa                                                            <  1:780077/140‑1 (MQ=255)

                                                                       cTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGt                                                          >  1:164325/1‑140 (MQ=255)

                                                                        tacGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGtt                                                         >  1:313890/3‑140 (MQ=255)

                                                                        tGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGtt                                                         >  1:422503/1‑140 (MQ=255)

                                                                        tGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGtt                                                         >  2:1342205/1‑140 (MQ=255)

                                                                          cGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgg                                                       >  2:1094422/1‑140 (MQ=255)

                                                                          cGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgg                                                       >  1:1182556/1‑140 (MQ=255)

                                                                          cGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgg                                                       >  2:1702552/1‑140 (MQ=255)

                                                                          cGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgg                                                       >  2:273031/1‑140 (MQ=255)

                                                                          cGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgg                                                       >  2:1047734/1‑140 (MQ=255)

                                                                          cGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgg                                                       >  2:1799650/1‑140 (MQ=255)

                                                                           gtgtATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTggg                                                      <  2:1750208/140‑1 (MQ=255)

                                                                            tgtATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgggg                                                     >  2:409823/1‑140 (MQ=255)

                                                                            tgtATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTgggg                                                     >  2:149156/1‑140 (MQ=255)

                                                                                ttAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGgccgc                                                 <  1:1047734/140‑1 (MQ=255)

                                                                                  aGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCa                                               >  1:879646/1‑140 (MQ=255)

                                                                                  aGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCa                                               >  2:814284/1‑140 (MQ=255)

                                                                                   ggCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTGGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAg                                              <  2:869291/140‑1 (MQ=255)

                                                                                    gCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCCAGTTGGGGCCGCCAg                                              <  2:72926/140‑1 (MQ=255)

                                                                                    gCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCCAGTTGGGGCCGCCAg                                              >  1:72926/1‑140 (MQ=255)

                                                                                    gCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGc                                             >  2:229635/1‑140 (MQ=255)

                                                                                       gAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGt                                          >  1:997361/1‑140 (MQ=255)

                                                                                        aaaaaaCTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTc                                         >  2:367851/1‑140 (MQ=255)

                                                                                        aaaaaaCTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTc                                         >  2:525141/1‑140 (MQ=255)

                                                                                        aaaaaaCTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTc                                         >  2:267714/1‑140 (MQ=255)

                                                                                         aaaaaCTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTcc                                        >  2:1776422/1‑140 (MQ=255)

                                                                                             aCTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCggg                                    <  1:525141/140‑1 (MQ=255)

                                                                                              cTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGc                                   <  1:241813/140‑1 (MQ=255)

                                                                                                 aTCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAgg                                >  1:886399/1‑140 (MQ=255)

                                                                                                    tGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTc                             <  2:1273231/140‑1 (MQ=255)

                                                                                                    ggggggATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTc                             <  2:429088/139‑1 (MQ=255)

                                                                                                    ggggggATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTc                             <  2:1247022/139‑1 (MQ=255)

                                                                                                     gggggATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGTGGTCCCGGGCAGGTTCg                            <  1:176664/140‑1 (MQ=255)

                                                                                                      ggggATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGa                           <  1:538657/140‑1 (MQ=255)

                                                                                                       gggATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGAc                          >  1:1746195/1‑140 (MQ=255)

                                                                                                       gggATGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGAc                          <  2:165098/140‑1 (MQ=255)

                                                                                                         gATGTAGAAACTCAAGGAAGCAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCACCGGTCCCGGGCCGGTTCGGCTc                        >  2:1256516/1‑140 (MQ=255)

                                                                                                           tGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCt                      >  1:395617/1‑140 (MQ=255)

                                                                                                           tGTAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCt                      >  2:1579226/1‑140 (MQ=255)

                                                                                                             tAGAAACTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCtgt                    >  1:459402/1‑140 (MQ=255)

                                                                                                                  aCTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCt               >  2:1028726/1‑140 (MQ=255)

                                                                                                                   cTCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCtt              <  1:903780/140‑1 (MQ=255)

                                                                                                                    tCAAGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTc             >  2:660682/1‑140 (MQ=255)

                                                                                                                      aaGGAAGTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCg           <  2:164325/140‑1 (MQ=255)

                                                                                                                            gTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCaa       <  1:219669/138‑1 (MQ=255)

                                                                                                                            gTAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCaa       >  2:219669/1‑138 (MQ=255)

                                                                                                                             tAGCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCAAAAt    >  1:1556931/1‑140 (MQ=255)

                                                                                                                               gCTATAATGCTCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCAAAATGc  <  1:1678670/140‑1 (MQ=255)

CGTTAATTCCGCTCATATATCATTGTAAAATATGGGTTTTATATGAACTATAATGCTTTCGTGATAATACGCTGCGTGTATTAGGCGGAAAAAACTGATCTGGGGGATGTAGAAACTCAAGGAAGTAGCTATAATGCGCCCCGCCTCCATGTAGCAATCGAGGCGCGGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAAT‑CCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCAAAATGC  >  NC_000913/3836056‑3836322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`